메뉴 건너뛰기




Volumn 44, Issue D1, 2016, Pages D502-D508

enviPath - The environmental contaminant biotransformation pathway resource

Author keywords

[No Author keywords available]

Indexed keywords

ACCESS TO INFORMATION; ARTICLE; BIOTRANSFORMATION; COMPUTER INTERFACE; COMPUTER PREDICTION; DATA BASE; ENVIPATH DATABASE; ENVIRONMENT; INFORMATION SERVICE; INTERNET; MACHINE LEARNING; PRIORITY JOURNAL; WORKFLOW; BIOCATALYSIS; CHEMICAL DATABASE; CHEMISTRY; METABOLISM; POLLUTANT;

EID: 84976872328     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkv1229     Document Type: Article
Times cited : (131)

References (20)
  • 2
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto encyclopedia of genes and genomes
    • Kanehisa, M. and Goto, S. (2000) KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res., 28, 27-30.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 3
    • 51749092657 scopus 로고    scopus 로고
    • Data-driven extraction of relative reasoning rules to limit combinatorial explosion in biodegradation pathway prediction
    • Fenner, K., Gao, J., Kramer, S., Ellis, L. and Wackett, L. (2008) Data-driven extraction of relative reasoning rules to limit combinatorial explosion in biodegradation pathway prediction. Bioinformatics, 24, 2079-2085.
    • (2008) Bioinformatics , vol.24 , pp. 2079-2085
    • Fenner, K.1    Gao, J.2    Kramer, S.3    Ellis, L.4    Wackett, L.5
  • 4
    • 77951940379 scopus 로고    scopus 로고
    • Predicting biodegradation products and pathways: A hybrid knowledge- and machine learning-based approach
    • Wicker, J., Fenner, K., Ellis, L., Wackett, L. and Kramer, S. (2010) Predicting biodegradation products and pathways: a hybrid knowledge- and machine learning-based approach. Bioinformatics, 26, 814-821.
    • (2010) Bioinformatics , vol.26 , pp. 814-821
    • Wicker, J.1    Fenner, K.2    Ellis, L.3    Wackett, L.4    Kramer, S.5
  • 6
    • 79955031899 scopus 로고    scopus 로고
    • Ketcher: Web-based chemical structure editor
    • Karulin, B. and Kozhevnikov, M. (2011) Ketcher: web-based chemical structure editor. J. Cheminform., 3, P3.
    • (2011) J. Cheminform. , vol.3 , pp. P3
    • Karulin, B.1    Kozhevnikov, M.2
  • 7
    • 80052090509 scopus 로고    scopus 로고
    • AMBIT-SMARTS: Efficient searching of chemical structures and fragments
    • Jeliazkova, N. and Kochev, N. (2011) AMBIT-SMARTS: efficient searching of chemical structures and fragments. Mol. Inform., 30, 707-720.
    • (2011) Mol. Inform. , vol.30 , pp. 707-720
    • Jeliazkova, N.1    Kochev, N.2
  • 8
    • 48449089104 scopus 로고    scopus 로고
    • The university of Minnesota pathway prediction system: Predicting metabolic logic
    • Ellis, L.B., Gao, J., Fenner, K. and Wackett, L.P. (2008) The University of Minnesota pathway prediction system: predicting metabolic logic. Nucleic Acids Res., 36, W427-W432.
    • (2008) Nucleic Acids Res. , vol.36 , pp. W427-W432
    • Ellis, L.B.1    Gao, J.2    Fenner, K.3    Wackett, L.P.4
  • 9
    • 0141925274 scopus 로고    scopus 로고
    • Using absolute and relative reasoning in the prediction of the potential metabolism of xenobiotics
    • Button, W.G., Judson, P.N., Long, A. and Vessey, J.D. (2003) Using absolute and relative reasoning in the prediction of the potential metabolism of xenobiotics. J. Chem. Inf. Comput. Sci., 43, 1371-1377.
    • (2003) J. Chem. Inf. Comput. Sci. , vol.43 , pp. 1371-1377
    • Button, W.G.1    Judson, P.N.2    Long, A.3    Vessey, J.D.4
  • 14
    • 75549089640 scopus 로고    scopus 로고
    • The university of Minnesota biocatalysis/Biodegradation database: Improving public access
    • Gao, J., Ellis, L.B.M. and Wackett, L.P. (2010) The University of Minnesota Biocatalysis/Biodegradation database: improving public access. Nucleic Acids Res., 38, D488-D491.
    • (2010) Nucleic Acids Res. , vol.38 , pp. D488-D491
    • Gao, J.1    Ellis, L.B.M.2    Wackett, L.P.3
  • 15
    • 33847395360 scopus 로고    scopus 로고
    • Classification of metabolites with kernel-partial least squares (K-PLS)
    • Embrechts, M.J. and Ekins, S. (2007) Classification of metabolites with kernel-partial least squares (K-PLS). Drug Metab. Dispos., 35, 325-327.
    • (2007) Drug Metab. Dispos. , vol.35 , pp. 325-327
    • Embrechts, M.J.1    Ekins, S.2
  • 16
    • 33845365378 scopus 로고    scopus 로고
    • Prediction of oxidoreductase-catalyzed reactions based on atomic properties of metabolites
    • Mu, F., Unkefer, P.J., Unkefer, C.J. and Hlavacek, W.S. (2006) Prediction of oxidoreductase-catalyzed reactions based on atomic properties of metabolites. Bioinformatics, 22, 3082-3088.
    • (2006) Bioinformatics , vol.22 , pp. 3082-3088
    • Mu, F.1    Unkefer, P.J.2    Unkefer, C.J.3    Hlavacek, W.S.4
  • 17
    • 34249940105 scopus 로고    scopus 로고
    • The environmental fate of organic pollutants through the global microbial metabolism
    • Gómez, M.J., Pazos, F., Guijarro, F.J., de Lorenzo, V. and Valencia, A. (2007) The environmental fate of organic pollutants through the global microbial metabolism. Mol. Syst. Biol., 3, 114.
    • (2007) Mol. Syst. Biol. , vol.3 , pp. 114
    • Gómez, M.J.1    Pazos, F.2    Guijarro, F.J.3    De Lorenzo, V.4    Valencia, A.5
  • 18
    • 34547691000 scopus 로고    scopus 로고
    • Systematic analysis of enzyme-catalyzed reaction patterns and prediction of microbial biodegradation pathways
    • Oh, M., Yamada, T., Hattori, M., Goto, S. and Kanehisa, M. (2007) Systematic analysis of enzyme-catalyzed reaction patterns and prediction of microbial biodegradation pathways. J. Chem. Info. Model., 47, 1702-1712.
    • (2007) J. Chem. Info. Model. , vol.47 , pp. 1702-1712
    • Oh, M.1    Yamada, T.2    Hattori, M.3    Goto, S.4    Kanehisa, M.5
  • 19
    • 0036490150 scopus 로고    scopus 로고
    • Probabilistic assessment of biodegradability based on metabolic pathways: Catabol system
    • Jaworska, J., Dimitrov, S., Nikolova, N. and Mekenyan, O. (2002) Probabilistic assessment of biodegradability based on metabolic pathways: CATABOL system. SAR QSAR Environ. Res., 13, 307-323.
    • (2002) SAR QSAR Environ. Res. , vol.13 , pp. 307-323
    • Jaworska, J.1    Dimitrov, S.2    Nikolova, N.3    Mekenyan, O.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.