-
1
-
-
80054746492
-
Exome sequencing as a tool for Mendelian disease gene discovery
-
Bamshad MJ, et al. (2011) Exome sequencing as a tool for Mendelian disease gene discovery. Nat Rev Genet 12(11):745–755.
-
(2011)
Nat Rev Genet
, vol.12
, Issue.11
, pp. 745-755
-
-
Bamshad, MJ1
-
2
-
-
84892507301
-
Applications of high-throughput DNA sequencing to benign hematology
-
Sankaran VG, Gallagher PG (2013) Applications of high-throughput DNA sequencing to benign hematology. Blood 122(22):3575–3582.
-
(2013)
Blood
, vol.122
, Issue.22
, pp. 3575-3582
-
-
Sankaran, VG1
Gallagher, PG2
-
3
-
-
84863554398
-
Exome sequencing identifies GATA1 mutations resulting in Diamond-Blackfan anemia
-
Sankaran VG, et al. (2012) Exome sequencing identifies GATA1 mutations resulting in Diamond-Blackfan anemia. J Clin Invest 122(7):2439–2443.
-
(2012)
J Clin Invest
, vol.122
, Issue.7
, pp. 2439-2443
-
-
Sankaran, VG1
-
4
-
-
84883649384
-
Homozygous mutations in a predicted endonuclease are a novel cause of congenital dyserythropoietic anemia type I
-
WGS500 Consortium
-
Babbs C, et al.; WGS500 Consortium (2013) Homozygous mutations in a predicted endonuclease are a novel cause of congenital dyserythropoietic anemia type I. Haematologica 98(9):1383–1387.
-
(2013)
Haematologica
, vol.98
, Issue.9
, pp. 1383-1387
-
-
Babbs, C1
-
5
-
-
84926343896
-
X-linked macrocytic dyserythropoietic anemia in females with an ALAS2 mutation
-
Sankaran VG, et al. (2015) X-linked macrocytic dyserythropoietic anemia in females with an ALAS2 mutation. J Clin Invest 125(4):1665–1669.
-
(2015)
J Clin Invest
, vol.125
, Issue.4
, pp. 1665-1669
-
-
Sankaran, VG1
-
6
-
-
84865279173
-
Mutations in the mechanotransduction protein PIEZO1 are associated with hereditary xerocytosis
-
Zarychanski R, et al. (2012) Mutations in the mechanotransduction protein PIEZO1 are associated with hereditary xerocytosis. Blood 120(9):1908–1915.
-
(2012)
Blood
, vol.120
, Issue.9
, pp. 1908-1915
-
-
Zarychanski, R1
-
7
-
-
84942414438
-
Mutations in the Gardos channel (KCNN4) are associated with hereditary xerocytosis
-
Glogowska E, Lezon-Geyda K, Maksimova Y, Schulz VP, Gallagher PG (2015) Mutations in the Gardos channel (KCNN4) are associated with hereditary xerocytosis. Blood 126(11):1281–1284.
-
(2015)
Blood
, vol.126
, Issue.11
, pp. 1281-1284
-
-
Glogowska, E1
Lezon-Geyda, K2
Maksimova, Y3
Schulz, VP4
Gallagher, PG5
-
8
-
-
42649118442
-
Mutations in TMPRSS6 cause iron-refractory iron deficiency anemia (IRIDA)
-
Finberg KE, et al. (2008) Mutations in TMPRSS6 cause iron-refractory iron deficiency anemia (IRIDA). Nat Genet 40(5):569–571.
-
(2008)
Nat Genet
, vol.40
, Issue.5
, pp. 569-571
-
-
Finberg, KE1
-
9
-
-
84885785987
-
Clinical whole-exome sequencing for the diagnosis of mendelian disorders
-
Yang Y, et al. (2013) Clinical whole-exome sequencing for the diagnosis of mendelian disorders. N Engl J Med 369(16):1502–1511.
-
(2013)
N Engl J Med
, vol.369
, Issue.16
, pp. 1502-1511
-
-
Yang, Y1
-
10
-
-
84903879868
-
Performance comparison of four exome capture systems for deep sequencing
-
Chilamakuri CS, et al. (2014) Performance comparison of four exome capture systems for deep sequencing. BMC Genomics 15:449.
-
(2014)
BMC Genomics
, vol.15
, pp. 449
-
-
Chilamakuri, CS1
-
11
-
-
84896448861
-
A survey of tools for variant analysis of next-generation genome sequencing data
-
Pabinger S, et al. (2014) A survey of tools for variant analysis of next-generation genome sequencing data. Brief Bioinform 15(2):256–278.
-
(2014)
Brief Bioinform
, vol.15
, Issue.2
, pp. 256-278
-
-
Pabinger, S1
-
12
-
-
84869436774
-
Interpreting noncoding genetic variation in complex traits and human disease
-
Ward LD, Kellis M (2012) Interpreting noncoding genetic variation in complex traits and human disease. Nat Biotechnol 30(11):1095–1106.
-
(2012)
Nat Biotechnol
, vol.30
, Issue.11
, pp. 1095-1106
-
-
Ward, LD1
Kellis, M2
-
13
-
-
84899476119
-
Guidelines for investigating causality of sequence variants in human disease
-
MacArthur DG, et al. (2014) Guidelines for investigating causality of sequence variants in human disease. Nature 508(7497):469–476.
-
(2014)
Nature
, vol.508
, Issue.7497
, pp. 469-476
-
-
MacArthur, DG1
-
14
-
-
77952733302
-
Genes, mutations, and human inherited disease at the dawn of the age of personalized genomics
-
Cooper DN, et al. (2010) Genes, mutations, and human inherited disease at the dawn of the age of personalized genomics. Hum Mutat 31(6):631–655.
-
(2010)
Hum Mutat
, vol.31
, Issue.6
, pp. 631-655
-
-
Cooper, DN1
-
15
-
-
84938888109
-
Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning
-
Alipanahi B, Delong A, Weirauch MT, Frey BJ (2015) Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning. Nat Biotechnol 33(8): 831–838.
-
(2015)
Nat Biotechnol
, vol.33
, Issue.8
, pp. 831-838
-
-
Alipanahi, B1
Delong, A2
Weirauch, MT3
Frey, BJ4
-
16
-
-
84938276507
-
A method to predict the impact of regulatory variants from DNA sequence
-
Lee D, et al. (2015) A method to predict the impact of regulatory variants from DNA sequence. Nat Genet 47(8):955–961.
-
(2015)
Nat Genet
, vol.47
, Issue.8
, pp. 955-961
-
-
Lee, D1
-
17
-
-
84940830979
-
FTO obesity variant circuitry and adipocyte browning in humans
-
Claussnitzer M, et al. (2015) FTO obesity variant circuitry and adipocyte browning in humans. N Engl J Med 373(10):895–907.
-
(2015)
N Engl J Med
, vol.373
, Issue.10
, pp. 895-907
-
-
Claussnitzer, M1
-
18
-
-
84923326765
-
Genetic and epigenetic fine mapping of causal autoimmune disease variants
-
Farh KK, et al. (2015) Genetic and epigenetic fine mapping of causal autoimmune disease variants. Nature 518(7539):337–343.
-
(2015)
Nature
, vol.518
, Issue.7539
, pp. 337-343
-
-
Farh, KK1
-
19
-
-
84934325147
-
Genetic variation determines PPARγ function and anti-diabetic drug response in vivo
-
Soccio RE, et al. (2015) Genetic variation determines PPARγ function and anti-diabetic drug response in vivo. Cell 162(1):33–44.
-
(2015)
Cell
, vol.162
, Issue.1
, pp. 33-44
-
-
Soccio, RE1
-
20
-
-
0035103547
-
Uroporphyrinogen III synthase erythroid promoter mutations in adjacent GATA1 and CP2 elements cause congenital erythropoietic porphyria
-
Solis C, Aizencang GI, Astrin KH, Bishop DF, Desnick RJ (2001) Uroporphyrinogen III synthase erythroid promoter mutations in adjacent GATA1 and CP2 elements cause congenital erythropoietic porphyria. J Clin Invest 107(6):753–762.
-
(2001)
J Clin Invest
, vol.107
, Issue.6
, pp. 753-762
-
-
Solis, C1
Aizencang, GI2
Astrin, KH3
Bishop, DF4
Desnick, RJ5
-
21
-
-
84896828347
-
X-linked sideroblastic anemia due to ALAS2 intron 1 enhancer element GATA binding site mutations
-
Campagna DR, et al. (2014) X-linked sideroblastic anemia due to ALAS2 intron 1 enhancer element GATA binding site mutations. Am J Hematol 89(3):315–319.
-
(2014)
Am J Hematol
, vol.89
, Issue.3
, pp. 315-319
-
-
Campagna, DR1
-
22
-
-
84896689530
-
Identification of a novel erythroid-specific enhancer for the ALAS2 gene and its loss-of-function mutation which is associated with congenital sideroblastic anemia
-
Kaneko K, et al. (2014) Identification of a novel erythroid-specific enhancer for the ALAS2 gene and its loss-of-function mutation which is associated with congenital sideroblastic anemia. Haematologica 99(2):252–261.
-
(2014)
Haematologica
, vol.99
, Issue.2
, pp. 252-261
-
-
Kaneko, K1
-
23
-
-
0033765506
-
A new PKLR gene mutation in the R-type promoter region affects the gene transcription causing pyruvate kinase deficiency
-
Manco L, et al. (2000) A new PKLR gene mutation in the R-type promoter region affects the gene transcription causing pyruvate kinase deficiency. Br J Haematol 110(4):993–997.
-
(2000)
Br J Haematol
, vol.110
, Issue.4
, pp. 993-997
-
-
Manco, L1
-
24
-
-
84893207752
-
Mutation of the GATA site in the erythroid cell-specific regulatory element of the ABO gene in a Bm subgroup individual
-
(Suppl 2)
-
Nakajima T, et al. (2013) Mutation of the GATA site in the erythroid cell-specific regulatory element of the ABO gene in a Bm subgroup individual. Transfusion 53(11, Suppl 2):2917–2927.
-
(2013)
Transfusion
, vol.53
, Issue.11
, pp. 2917-2927
-
-
Nakajima, T1
-
25
-
-
0026699172
-
Delta-thalassemia caused by disruption of the site for an erythroid-specific transcription factor, GATA-1, in the delta-globin gene promoter
-
Matsuda M, Sakamoto N, Fukumaki Y (1992) Delta-thalassemia caused by disruption of the site for an erythroid-specific transcription factor, GATA-1, in the delta-globin gene promoter. Blood 80(5):1347–1351.
-
(1992)
Blood
, vol.80
, Issue.5
, pp. 1347-1351
-
-
Matsuda, M1
Sakamoto, N2
Fukumaki, Y3
-
26
-
-
84884190615
-
Analysis of disease-causing GATA1 mutations in murine gene complementation systems
-
Campbell AE, Wilkinson-White L, Mackay JP, Matthews JM, Blobel GA (2013) Analysis of disease-causing GATA1 mutations in murine gene complementation systems. Blood 121(26):5218–5227.
-
(2013)
Blood
, vol.121
, Issue.26
, pp. 5218-5227
-
-
Campbell, AE1
Wilkinson-White, L2
Mackay, JP3
Matthews, JM4
Blobel, GA5
-
27
-
-
0141455931
-
GATA-1 converts lymphoid and myelomonocytic progenitors into the megakaryocyte/erythrocyte lineages
-
Iwasaki H, et al. (2003) GATA-1 converts lymphoid and myelomonocytic progenitors into the megakaryocyte/erythrocyte lineages. Immunity 19(3):451–462.
-
(2003)
Immunity
, vol.19
, Issue.3
, pp. 451-462
-
-
Iwasaki, H1
-
28
-
-
0029066359
-
GATA-1 reprograms avian myelomonocytic cell lines into eosinophils, thromboblasts, and erythroblasts
-
Kulessa H, Frampton J, Graf T (1995) GATA-1 reprograms avian myelomonocytic cell lines into eosinophils, thromboblasts, and erythroblasts. Genes Dev 9(10):1250–1262.
-
(1995)
Genes Dev
, vol.9
, Issue.10
, pp. 1250-1262
-
-
Kulessa, H1
Frampton, J2
Graf, T3
-
29
-
-
70449696134
-
Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression
-
Cheng Y, et al. (2009) Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression. Genome Res 19(12):2172–2184.
-
(2009)
Genome Res
, vol.19
, Issue.12
, pp. 2172-2184
-
-
Cheng, Y1
-
30
-
-
80053516108
-
Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration
-
Wu W, et al. (2011) Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration. Genome Res 21(10):1659–1671.
-
(2011)
Genome Res
, vol.21
, Issue.10
, pp. 1659-1671
-
-
Wu, W1
-
31
-
-
84875442750
-
Identification of biologically relevant enhancers in human erythroid cells
-
Su MY, et al. (2013) Identification of biologically relevant enhancers in human erythroid cells. J Biol Chem 288(12):8433–8444.
-
(2013)
J Biol Chem
, vol.288
, Issue.12
, pp. 8433-8444
-
-
Su, MY1
-
32
-
-
84919608422
-
Altered chromatin occupancy of master regulators underlies evolutionary divergence in the transcriptional landscape of erythroid differentiation
-
Ulirsch JC, et al. (2014) Altered chromatin occupancy of master regulators underlies evolutionary divergence in the transcriptional landscape of erythroid differentiation. PLoS Genet 10(12):e1004890.
-
(2014)
PLoS Genet
, vol.10
, Issue.12
, pp. e1004890
-
-
Ulirsch, JC1
-
33
-
-
84891159436
-
Ldb1 complexes: Tthe new master regulators of erythroid gene transcription
-
Love PE, Warzecha C, Li L (2014) Ldb1 complexes: Tthe new master regulators of erythroid gene transcription. Trends Genet 30(1):1–9.
-
(2014)
Trends Genet
, vol.30
, Issue.1
, pp. 1-9
-
-
Love, PE1
Warzecha, C2
Li, L3
-
34
-
-
80053559720
-
Genome-wide ChIP-Seq reveals a dramatic shift in the binding of the transcription factor erythroid Kruppellike factor during erythrocyte differentiation
-
NISC Comparative Sequencing Center
-
Pilon AM, et al.; NISC Comparative Sequencing Center (2011) Genome-wide ChIP-Seq reveals a dramatic shift in the binding of the transcription factor erythroid Kruppellike factor during erythrocyte differentiation. Blood 118(17):e139–e148.
-
(2011)
Blood
, vol.118
, Issue.17
, pp. e139-e148
-
-
Pilon, AM1
-
35
-
-
84880832596
-
Ldb1-nucleated transcription complexes function as primary mediators of global erythroid gene activation
-
Li L, et al. (2013) Ldb1-nucleated transcription complexes function as primary mediators of global erythroid gene activation. Blood 121(22):4575–4585.
-
(2013)
Blood
, vol.121
, Issue.22
, pp. 4575-4585
-
-
Li, L1
-
36
-
-
84902504213
-
Role of LDB1 in the transition from chromatin looping to transcription activation
-
Krivega I, Dale RK, Dean A (2014) Role of LDB1 in the transition from chromatin looping to transcription activation. Genes Dev 28(12):1278–1290.
-
(2014)
Genes Dev
, vol.28
, Issue.12
, pp. 1278-1290
-
-
Krivega, I1
Dale, RK2
Dean, A3
-
37
-
-
77955131763
-
Genome-wide identification of TAL1’s functional targets: Insights into its mechanisms of action in primary erythroid cells
-
Kassouf MT, et al. (2010) Genome-wide identification of TAL1’s functional targets: Insights into its mechanisms of action in primary erythroid cells. Genome Res 20(8): 1064–1083.
-
(2010)
Genome Res
, vol.20
, Issue.8
, pp. 1064-1083
-
-
Kassouf, MT1
-
38
-
-
84929320904
-
Occupancy by key transcription factors is a more accurate predictor of enhancer activity than histone modifications or chromatin accessibility
-
Dogan N, et al. (2015) Occupancy by key transcription factors is a more accurate predictor of enhancer activity than histone modifications or chromatin accessibility. Epigenetics Chromatin 8:16–36.
-
(2015)
Epigenetics Chromatin
, vol.8
, pp. 16-36
-
-
Dogan, N1
-
39
-
-
84921531882
-
KLF1 stabilizes GATA-1 and TAL1 occupancy in the human β-globin locus
-
Kang Y, Kim YW, Yun J, Shin J, Kim A (2015) KLF1 stabilizes GATA-1 and TAL1 occupancy in the human β-globin locus. Biochim Biophys Acta 1849(3):282–289.
-
(2015)
Biochim Biophys Acta
, vol.1849
, Issue.3
, pp. 282-289
-
-
Kang, Y1
Kim, YW2
Yun, J3
Shin, J4
Kim, A5
-
40
-
-
84929630294
-
Editing the genome to introduce a beneficial naturally occurring mutation associated with increased fetal globin
-
Wienert B, et al. (2015) Editing the genome to introduce a beneficial naturally occurring mutation associated with increased fetal globin. Nat Commun 6:7085–7092.
-
(2015)
Nat Commun
, vol.6
, pp. 7085-7092
-
-
Wienert, B1
-
41
-
-
0030999645
-
The LIM-only protein Lmo2 is a bridging molecule assembling an erythroid, DNA-binding complex which includes the TAL1, E47, GATA-1, and Ldb1/NLI proteins
-
Wadman IA, et al. (1997) The LIM-only protein Lmo2 is a bridging molecule assembling an erythroid, DNA-binding complex which includes the TAL1, E47, GATA-1, and Ldb1/NLI proteins. EMBO J 16(11):3145–3157.
-
(1997)
EMBO J
, vol.16
, Issue.11
, pp. 3145-3157
-
-
Wadman, IA1
-
42
-
-
77957348625
-
Combinatorial transcriptional control in blood stem/progenitor cells: Genome-wide analysis of ten major transcriptional regulators
-
Wilson NK, et al. (2010) Combinatorial transcriptional control in blood stem/progenitor cells: Genome-wide analysis of ten major transcriptional regulators. Cell Stem Cell 7(4):532–544.
-
(2010)
Cell Stem Cell
, vol.7
, Issue.4
, pp. 532-544
-
-
Wilson, NK1
-
43
-
-
53349146734
-
A case of congenital red cell pyruvate kinase deficiency associated with hereditary stomatocytosis
-
Marcello AP, et al. (2008) A case of congenital red cell pyruvate kinase deficiency associated with hereditary stomatocytosis. Blood Cells Mol Dis 41(3):261–262.
-
(2008)
Blood Cells Mol Dis
, vol.41
, Issue.3
, pp. 261-262
-
-
Marcello, AP1
-
44
-
-
33845316442
-
Experimental validation of predicted mammalian erythroid cis-regulatory modules
-
Wang H, et al. (2006) Experimental validation of predicted mammalian erythroid cis-regulatory modules. Genome Res 16(12):1480–1492.
-
(2006)
Genome Res
, vol.16
, Issue.12
, pp. 1480-1492
-
-
Wang, H1
-
45
-
-
22144484881
-
Red cell pyruvate kinase deficiency: Molecular and clinical aspects
-
Zanella A, Fermo E, Bianchi P, Valentini G (2005) Red cell pyruvate kinase deficiency: Molecular and clinical aspects. Br J Haematol 130(1):11–25.
-
(2005)
Br J Haematol
, vol.130
, Issue.1
, pp. 11-25
-
-
Zanella, A1
Fermo, E2
Bianchi, P3
Valentini, G4
-
46
-
-
84913533757
-
Dynamic shifts in occupancy by TAL1 are guided by GATA factors and drive large-scale reprogramming of gene expression during hematopoiesis
-
Wu W, et al. (2014) Dynamic shifts in occupancy by TAL1 are guided by GATA factors and drive large-scale reprogramming of gene expression during hematopoiesis. Genome Res 24(12):1945–1962.
-
(2014)
Genome Res
, vol.24
, Issue.12
, pp. 1945-1962
-
-
Wu, W1
-
47
-
-
84922313916
-
Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways
-
Ballester B, et al. (2014) Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways. eLife 3:e02626.
-
(2014)
eLife
, vol.3
, pp. e02626
-
-
Ballester, B1
-
48
-
-
84911494217
-
Principles of regulatory information conservation between mouse and human
-
Mouse ENCODE Consortium
-
Cheng Y, et al.; Mouse ENCODE Consortium (2014) Principles of regulatory information conservation between mouse and human. Nature 515(7527):371–375.
-
(2014)
Nature
, vol.515
, Issue.7527
, pp. 371-375
-
-
Cheng, Y1
-
49
-
-
84961230138
-
Two novel missense mutations and a 5-bp deletion in the erythroid-specific promoter of the PKLR gene in two unrelated patients with pyruvate kinase-deficient transfusion-dependent chronic nonspherocytic hemolytic anemia
-
press
-
Kager L, et al. (2016) Two novel missense mutations and a 5-bp deletion in the erythroid-specific promoter of the PKLR gene in two unrelated patients with pyruvate kinase-deficient transfusion-dependent chronic nonspherocytic hemolytic anemia. Pediatr Blood Cancer, in press.
-
(2016)
Pediatr Blood Cancer
-
-
Kager, L1
-
50
-
-
0037441602
-
Disruption of a novel regulatory element in the erythroid-specific promoter of the human PKLR gene causes severe pyruvate kinase deficiency
-
van Wijk R, et al. (2003) Disruption of a novel regulatory element in the erythroid-specific promoter of the human PKLR gene causes severe pyruvate kinase deficiency. Blood 101(4):1596–1602.
-
(2003)
Blood
, vol.101
, Issue.4
, pp. 1596-1602
-
-
van Wijk, R1
-
51
-
-
0032479292
-
Identification and characterization of a conserved erythroid-specific enhancer located in intron 8 of the human 5-aminolevulinate synthase 2 gene
-
Surinya KH, Cox TC, May BK (1998) Identification and characterization of a conserved erythroid-specific enhancer located in intron 8 of the human 5-aminolevulinate synthase 2 gene. J Biol Chem 273(27):16798–16809.
-
(1998)
J Biol Chem
, vol.273
, Issue.27
, pp. 16798-16809
-
-
Surinya, KH1
Cox, TC2
May, BK3
-
52
-
-
84924418925
-
Anemia: progress in molecular mechanisms and therapies
-
Sankaran VG, Weiss MJ (2015) Anemia: progress in molecular mechanisms and therapies. Nat Med 21(3):221–230.
-
(2015)
Nat Med
, vol.21
, Issue.3
, pp. 221-230
-
-
Sankaran, VG1
Weiss, MJ2
-
53
-
-
70449719115
-
Amelioration of Sardinian beta0 thalassemia by genetic modifiers
-
Galanello R, et al. (2009) Amelioration of Sardinian beta0 thalassemia by genetic modifiers. Blood 114(18):3935–3937.
-
(2009)
Blood
, vol.114
, Issue.18
, pp. 3935-3937
-
-
Galanello, R1
-
54
-
-
78649819161
-
Mutation of a barrier insulator in the human ankyrin-1 gene is associated with hereditary spherocytosis
-
Gallagher PG, et al. (2010) Mutation of a barrier insulator in the human ankyrin-1 gene is associated with hereditary spherocytosis. J Clin Invest 120(12):4453–4465.
-
(2010)
J Clin Invest
, vol.120
, Issue.12
, pp. 4453-4465
-
-
Gallagher, PG1
-
55
-
-
84866600774
-
Cyclin D3 coordinates the cell cycle during differentiation to regulate erythrocyte size and number
-
Sankaran VG, et al. (2012) Cyclin D3 coordinates the cell cycle during differentiation to regulate erythrocyte size and number. Genes Dev 26(18):2075–2087.
-
(2012)
Genes Dev
, vol.26
, Issue.18
, pp. 2075-2087
-
-
Sankaran, VG1
-
56
-
-
0023805538
-
High-performance liquid chromatography of porphyrins
-
Lim CK, Li FM, Peters TJ (1988) High-performance liquid chromatography of porphyrins. J Chromatogr A 429:123–153.
-
(1988)
J Chromatogr A
, vol.429
, pp. 123-153
-
-
Lim, CK1
Li, FM2
Peters, TJ3
-
57
-
-
80955137934
-
Transcription factor binding predictions using TRAP for the analysis of ChIP-seq data and regulatory SNPs
-
Thomas-Chollier M, et al. (2011) Transcription factor binding predictions using TRAP for the analysis of ChIP-seq data and regulatory SNPs. Nat Protoc 6(12):1860–1869.
-
(2011)
Nat Protoc
, vol.6
, Issue.12
, pp. 1860-1869
-
-
Thomas-Chollier, M1
-
58
-
-
84867736794
-
Combinatorial assembly of developmental stage-specific enhancers controls gene expression programs during human erythropoiesis
-
Xu J, et al. (2012) Combinatorial assembly of developmental stage-specific enhancers controls gene expression programs during human erythropoiesis. Dev Cell 23(4): 796–811.
-
(2012)
Dev Cell
, vol.23
, Issue.4
, pp. 796-811
-
-
Xu, J1
-
59
-
-
84892911243
-
Analysis of chromatin-state plasticity identifies cell type-specific regulators of H3K27me3 patterns
-
Pinello L, Xu J, Orkin SH, Yuan GC (2014) Analysis of chromatin-state plasticity identifies cell type-specific regulators of H3K27me3 patterns. Proc Natl Acad Sci USA 111(3):E344–E353.
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, Issue.3
, pp. E344-E353
-
-
Pinello, L1
Xu, J2
Orkin, SH3
Yuan, GC4
-
60
-
-
80053501181
-
Regulation of nucleosome landscape and transcription factor targeting at tissue-specific enhancers by BRG1
-
Hu G, et al. (2011) Regulation of nucleosome landscape and transcription factor targeting at tissue-specific enhancers by BRG1. Genome Res 21(10):1650–1658.
-
(2011)
Genome Res
, vol.21
, Issue.10
, pp. 1650-1658
-
-
Hu, G1
-
61
-
-
70449675049
-
Discovering hematopoietic mechanisms through genome-wide analysis of GATA factor chromatin occupancy
-
Fujiwara T, et al. (2009) Discovering hematopoietic mechanisms through genome-wide analysis of GATA factor chromatin occupancy. Mol Cell 36(4):667–681.
-
(2009)
Mol Cell
, vol.36
, Issue.4
, pp. 667-681
-
-
Fujiwara, T1
-
62
-
-
84865790047
-
An integrated encyclopedia of DNA elements in the human genome
-
ENCODE Project Consortium
-
Consortium EP; ENCODE Project Consortium (2012) An integrated encyclopedia of DNA elements in the human genome. Nature 489(7414):57–74.
-
(2012)
Nature
, vol.489
, Issue.7414
, pp. 57-74
-
-
Consortium, EP1
-
63
-
-
84897568562
-
HBS1L-MYB intergenic variants modulate fetal hemoglobin via long-range MYB enhancers
-
Stadhouders R, et al. (2014) HBS1L-MYB intergenic variants modulate fetal hemoglobin via long-range MYB enhancers. J Clin Invest 124(4):1699–1710.
-
(2014)
J Clin Invest
, vol.124
, Issue.4
, pp. 1699-1710
-
-
Stadhouders, R1
-
64
-
-
84919692480
-
Use model-based analysis of ChIP-seq (MACS) to analyze short reads generated by sequencing protein-DNA interactions in embryonic stem cells
-
Liu T (2014) Use model-based analysis of ChIP-seq (MACS) to analyze short reads generated by sequencing protein-DNA interactions in embryonic stem cells. Methods Mol Biol 1150:81–95.
-
(2014)
Methods Mol Biol
, vol.1150
, pp. 81-95
-
-
Liu, T1
-
65
-
-
84901705651
-
Global transcriptome analyses of human and murine terminal erythroid differentiation
-
An X, et al. (2014) Global transcriptome analyses of human and murine terminal erythroid differentiation. Blood 123(22):3466–3477.
-
(2014)
Blood
, vol.123
, Issue.22
, pp. 3466-3477
-
-
An, X1
|