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Volumn 56, Issue 5, 2016, Pages 2141-2156

Use of crop growth models with whole-genome prediction: Application to a maize multienvironment trial

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EID: 84971500891     PISSN: 0011183X     EISSN: 14350653     Source Type: Journal    
DOI: 10.2135/cropsci2015.08.0512     Document Type: Article
Times cited : (134)

References (38)
  • 1
    • 54949113665 scopus 로고    scopus 로고
    • Molecular markers and selection for complex traits in plants: Learning from the last 20 years
    • Bernardo, R. 2008. Molecular markers and selection for complex traits in plants: Learning from the last 20 years. Crop Sci. 48:1649-1664. doi:10.2135/cropsci2008.03.0131
    • (2008) Crop Sci , vol.48 , pp. 1649-1664
    • Bernardo, R.1
  • 2
    • 37249055906 scopus 로고    scopus 로고
    • A mixed-model quantitative trait loci (QTL) analysis for multiple-environment trial data using environmental covariables for QTL-by-environment interactions, with an example in maize
    • Boer, M.P., D. Wright, L. Feng, D.W. Podlich, L. Luo, M. Cooper, and F.A. van Eeuwijk. 2007. A mixed-model quantitative trait loci (QTL) analysis for multiple-environment trial data using environmental covariables for QTL-by-environment interactions, with an example in maize. Genetics 177:1801-1813. doi:10.1534/genetics.107.071068
    • (2007) Genetics , vol.177 , pp. 1801-1813
    • Boer, M.P.1    Wright, D.2    Feng, L.3    Podlich, D.W.4    Luo, L.5    Cooper, M.6    Van Eeuwijk, F.A.7
  • 3
    • 1542320984 scopus 로고    scopus 로고
    • Seed dry weight response to source-sink manipulations in wheat, maize and soybean: A quantitative reappraisal
    • Borras, L., G.A. Slafer, and M.E. Otegui. 2004. Seed dry weight response to source-sink manipulations in wheat, maize and soybean: A quantitative reappraisal. Field Crops Res. 86:131-146. doi:10.1016/j.fcr.2003.08.002
    • (2004) Field Crops Res , vol.86 , pp. 131-146
    • Borras, L.1    Slafer, G.A.2    Otegui, M.E.3
  • 4
    • 0036212932 scopus 로고    scopus 로고
    • Using crop simulation to generate genotype by environment interaction effects for sorghum in water-limited environments
    • Chapman, S.C., M. Cooper, and G.L. Hammer. 2002. Using crop simulation to generate genotype by environment interaction effects for sorghum in water-limited environments. Aust. J. Agric. Res. 53:379-389. doi:10.1071/AR01070
    • (2002) Aust. J. Agric. Res , vol.53 , pp. 379-389
    • Chapman, S.C.1    Cooper, M.2    Hammer, G.L.3
  • 5
    • 0037262224 scopus 로고    scopus 로고
    • Evaluating plant breeding strategies by simulating gene action and dryland environment effects
    • Chapman, S., M. Cooper, D. Podlich, and G. Hammer. 2003. Evaluating plant breeding strategies by simulating gene action and dryland environment effects. Agron. J. 95:99-113. doi:10.2134/agronj2003.0099
    • (2003) Agron. J , vol.95 , pp. 99-113
    • Chapman, S.1    Cooper, M.2    Podlich, D.3    Hammer, G.4
  • 6
    • 71549115142 scopus 로고    scopus 로고
    • Simulating the yield impacts of organ-level quantitative trait loci associated with drought response in maize: A “gene-to-phenotype” modeling approach
    • Chenu, K., S.C. Chapman, F. Tardieu, G. McLean, C. Welcker, and G.L. Hammer. 2009. Simulating the yield impacts of organ-level quantitative trait loci associated with drought response in maize: A “gene-to-phenotype” modeling approach. Genetics 183:1507-1523. doi:10.1534/genetics.109.105429
    • (2009) Genetics , vol.183 , pp. 1507-1523
    • Chenu, K.1    Chapman, S.C.2    Tardieu, F.3    McLean, G.4    Welcker, C.5    Hammer, G.L.6
  • 7
    • 0036014567 scopus 로고    scopus 로고
    • The GP problem: Quantifying gene-to-phenotype relationships
    • Cooper, M., S.C. Chapman, D.W. Podlich, and G.L. Hammer. 2002. The GP problem: Quantifying gene-to-phenotype relationships. In Silico Biol. 2:151-164.
    • (2002) In Silico Biol , vol.2 , pp. 151-164
    • Cooper, M.1    Chapman, S.C.2    Podlich, D.W.3    Hammer, G.L.4
  • 8
    • 84900460819 scopus 로고    scopus 로고
    • Breeding drought-tolerant maize hybrids for the US corn-belt: Discovery to product
    • Cooper, M., C. Gho, R. Leafgren, T. Tang, and C. Messina. 2014b. Breeding drought-tolerant maize hybrids for the US corn-belt: Discovery to product. J. Exp. Bot. 65:6191-6204. doi:10.1093/jxb/eru064
    • (2014) J. Exp. Bot , vol.65 , pp. 6191-6204
    • Cooper, M.1    Gho, C.2    Leafgren, R.3    Tang, T.4    Messina, C.5
  • 11
    • 27644497087 scopus 로고    scopus 로고
    • Gene-to-phenotype models and complex trait genetics
    • Cooper, M., D.W. Podlich, and O.S. Smith. 2005. Gene-to-phenotype models and complex trait genetics. Aust. J. Agric. Res. 56:895-918. doi:10.1071/AR05154
    • (2005) Aust. J. Agric. Res , vol.56 , pp. 895-918
    • Cooper, M.1    Podlich, D.W.2    Smith, O.S.3
  • 12
    • 0030814757 scopus 로고    scopus 로고
    • Rooting depth and soil water extraction patterns of different crops in a silty loam Haplustoll
    • Dardanelli, J.L., O.A. Bachmeier, R. Sereno, and R. Gil. 1997. Rooting depth and soil water extraction patterns of different crops in a silty loam Haplustoll. Field Crops Res. 54:29-38. doi:10.1016/S0378-4290(97)00017-8
    • (1997) Field Crops Res , vol.54 , pp. 29-38
    • Dardanelli, J.L.1    Bachmeier, O.A.2    Sereno, R.3    Gil, R.4
  • 13
    • 0027132991 scopus 로고
    • Causes for silk delay in a lowland tropical maize population
    • Edmeades, G.O., J. Bolaños, M. Hernàndez, and S. Bello. 1993. Causes for silk delay in a lowland tropical maize population. Crop Sci. 33:1029-1035. doi:10.2135/cropsci1993.0011183X003300050031x
    • (1993) Crop Sci , vol.33 , pp. 1029-1035
    • Edmeades, G.O.1    Bolaños, J.2    Hernàndez, M.3    Bello, S.4
  • 14
    • 84930907769 scopus 로고    scopus 로고
    • Industry-scale evaluation of maize hybrids selected for increased yield in drought-stress conditions of the US corn belt
    • Gaffney, J., J. Schussler, C. Lӧffler, W. Cai, S. Paszkiewicz, C. Messina, J. Groeteke, J. Keaschall, and M. Cooper. 2015. Industry-scale evaluation of maize hybrids selected for increased yield in drought-stress conditions of the US corn belt. Crop Sci. 55:1608-1618. doi:10.2135/cropsci2014.09.0654
    • (2015) Crop Sci , vol.55 , pp. 1608-1618
    • Gaffney, J.1    Schussler, J.2    Lӧffler, C.3    Cai, W.4    Paszkiewicz, S.5    Messina, C.6    Groeteke, J.7    Keaschall, J.8    Cooper, M.9
  • 15
    • 84876450506 scopus 로고    scopus 로고
    • Transpiration response of maize hybrids to atmospheric vapor pressure deficit
    • Gholipoor, M., S. Choudhary, T.R. Sinclair, C.D. Messina, and M. Cooper. 2013. Transpiration response of maize hybrids to atmospheric vapor pressure deficit. J. Agron. Crop Sci. 199:155-160. doi:10.1111/jac.12010
    • (2013) J. Agron. Crop Sci , vol.199 , pp. 155-160
    • Gholipoor, M.1    Choudhary, S.2    Sinclair, T.R.3    Messina, C.D.4    Cooper, M.5
  • 16
    • 79956199958 scopus 로고    scopus 로고
    • Extension of the Bayesian alphabet for genomic selection
    • Habier, D., R. Fernando, K. Kizilkaya, and D. Garrick. 2011. Extension of the Bayesian alphabet for genomic selection. BMC Bio-informatics 12:186. doi:10.1186/1471-2105-12-186
    • (2011) BMC Bio-Informatics , vol.12
    • Habier, D.1    Fernando, R.2    Kizilkaya, K.3    Garrick, D.4
  • 18
    • 59249106951 scopus 로고    scopus 로고
    • Genomic selection for crop improvement
    • Heffner, E.L., M.E. Sorrells, and J.L. Jannink. 2009. Genomic selection for crop improvement. Crop Sci. 49:1-12. doi:10.2135/cropsci2008.08.0512
    • (2009) Crop Sci , vol.49 , pp. 1-12
    • Heffner, E.L.1    Sorrells, M.E.2    Jannink, J.L.3
  • 19
    • 84906911933 scopus 로고    scopus 로고
    • Integrating environmental covariates and crop modeling into the genomic selection framework to predict genotype by environment interactions
    • Heslot, N., D. Akdemir, M.E. Sorrells, and J.L. Jannink. 2014. Integrating environmental covariates and crop modeling into the genomic selection framework to predict genotype by environment interactions. Theor. Appl. Genet. 127:463-480. doi:10.1007/s00122-013-2231-5
    • (2014) Theor. Appl. Genet , vol.127 , pp. 463-480
    • Heslot, N.1    Akdemir, D.2    Sorrells, M.E.3    Jannink, J.L.4
  • 21
    • 0030294895 scopus 로고    scopus 로고
    • The role of physiological understanding in plant breeding; from a breeding perspective
    • Jackson, P., M. Robertson, M. Cooper, and G. Hammer. 1996. The role of physiological understanding in plant breeding; from a breeding perspective. Field Crops Res. 49:11-37. doi:10.1016/S0378-4290(96)01012-X
    • (1996) Field Crops Res , vol.49 , pp. 11-37
    • Jackson, P.1    Robertson, M.2    Cooper, M.3    Hammer, G.4
  • 23
    • 84890315875 scopus 로고    scopus 로고
    • Post-GWAS: Where next? More samples, more SNPs or more biology?
    • Marjoram, P., A. Zubair, and S.V. Nuzhdin. 2014. Post-GWAS: Where next? More samples, more SNPs or more biology? Heredity 112:79-88. doi:10.1038/hdy.2013.52
    • (2014) Heredity , vol.112 , pp. 79-88
    • Marjoram, P.1    Zubair, A.2    Nuzhdin, S.V.3
  • 24
    • 4544348943 scopus 로고    scopus 로고
    • QTL analyses of complex traits with cross validation, bootstrapping and other biometric methods
    • Melchinger, A.E., H.F. Utz, and C.C. Schon. 2004. QTL analyses of complex traits with cross validation, bootstrapping and other biometric methods. Euphytica 137:1-11. doi:10.1023/B:EUPH.0000040498.48379.68
    • (2004) Euphytica , vol.137 , pp. 1-11
    • Melchinger, A.E.1    Utz, H.F.2    Schon, C.C.3
  • 25
    • 79251477164 scopus 로고    scopus 로고
    • Yield-Trait performance landscapes: From theory to application in breeding maize for drought tolerance
    • Messina, C.D., D. Podlich, Z. Dong, M. Samples, and M. Cooper. 2011. Yield-Trait performance landscapes: From theory to application in breeding maize for drought tolerance. J. Exp. Bot. 62:855-868. doi:10.1093/jxb/erq329
    • (2011) J. Exp. Bot , vol.62 , pp. 855-868
    • Messina, C.D.1    Podlich, D.2    Dong, Z.3    Samples, M.4    Cooper, M.5
  • 27
    • 0035045051 scopus 로고    scopus 로고
    • Prediction of total genetic value using genome-wide dense marker maps
    • Meuwissen, T.H.E., B.J. Hayes, and M.E. Goddard. 2001. Prediction of total genetic value using genome-wide dense marker maps. Genetics 157:1819-1829.
    • (2001) Genetics , vol.157 , pp. 1819-1829
    • Meuwissen, T.H.E.1    Hayes, B.J.2    Goddard, M.E.3
  • 28
    • 0000291065 scopus 로고
    • Water deficit effects on maize yields modeled under current and “greenhouse” climates
    • Muchow, R.C., and T.R. Sinclair. 1991. Water deficit effects on maize yields modeled under current and “greenhouse” climates. Agron. J. 83:1052-1059. doi:10.2134/agronj1991.00021962008300060023x
    • (1991) Agron. J , vol.83 , pp. 1052-1059
    • Muchow, R.C.1    Sinclair, T.R.2
  • 29
    • 0000209134 scopus 로고
    • Temperature and solar radiation effects on potential maize yield across locations
    • Muchow, R.C., T.R. Sinclair, and J.M. Bennett. 1990. Temperature and solar radiation effects on potential maize yield across locations. Agron. J. 82:338-343. doi:10.2134/agronj1990.00021962008200020033x
    • (1990) Agron. J , vol.82 , pp. 338-343
    • Muchow, R.C.1    Sinclair, T.R.2    Bennett, J.M.3
  • 31
    • 0001813315 scopus 로고    scopus 로고
    • Soil water balance and plant water stress
    • G.Y. Tsuji, G. Hoogenboom, and P.K. Thornton, Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Ritchie, J.T. 1998. Soil water balance and plant water stress. In: G.Y. Tsuji, G. Hoogenboom, and P.K. Thornton, editors, Understanding options for agricultural production. Kluwer Academic Publishers, Dordrecht, The Netherlands. p. 41-54.
    • (1998) Understanding Options for Agricultural Production , pp. 41-54
    • Ritchie, J.T.1
  • 32
    • 38249003202 scopus 로고
    • Water extraction by grain sorghum in a sub-humid environment. I. Analysis of the water extraction pattern
    • Robertson, M.J., S. Fukai, M.M. Ludlow, and G.L. Hammer. 1993. Water extraction by grain sorghum in a sub-humid environment. I. Analysis of the water extraction pattern. Field Crops Res. 33:81-97. doi:10.1016/0378-4290(93)90095-5
    • (1993) Field Crops Res , vol.33 , pp. 81-97
    • Robertson, M.J.1    Fukai, S.2    Ludlow, M.M.3    Hammer, G.L.4
  • 33
    • 0000608148 scopus 로고
    • Relative sensitivity of grain yield and biomass accumulation to drought in field-grown maize
    • Sinclair, T.R., J.M. Bennett, and R.C. Muchow. 1990. Relative sensitivity of grain yield and biomass accumulation to drought in field-grown maize. Crop Sci. 30:690-693. doi:10.2135/cropsci1990.0011183X003000030043x
    • (1990) Crop Sci , vol.30 , pp. 690-693
    • Sinclair, T.R.1    Bennett, J.M.2    Muchow, R.C.3
  • 35
    • 85102997846 scopus 로고
    • Efficient water use in crop production: Research or re-search?
    • H.M. Taylor and W.R. Jordan, ASA, CSSA, and SSSA, Madison, WI
    • Tanner, C.B., and T.R. Sinclair. 1983. Efficient water use in crop production: Research or re-search? In: H.M. Taylor and W.R. Jordan, editors, Limitations to efficient water use in crop production. ASA, CSSA, and SSSA, Madison, WI. p. 1-27.
    • (1983) Limitations to Efficient Water Use in Crop Production , pp. 1-27
    • Tanner, C.B.1    Sinclair, T.R.2
  • 36
    • 84938717555 scopus 로고    scopus 로고
    • Integrating crop growth models with whole genome prediction through approximate Bayesian computation
    • Technow, F., C.D. Messina, L.R. Totir, and M. Cooper. 2015. Integrating crop growth models with whole genome prediction through approximate Bayesian computation. PLoS ONE 10:E0130855. doi:10.1371/journal.pone.0130855
    • (2015) Plos ONE , vol.10
    • Technow, F.1    Messina, C.D.2    Totir, L.R.3    Cooper, M.4
  • 38
    • 0001205315 scopus 로고
    • Osmotic adjustment and the inhibition of leaf, root, stem and silk growth at low water potentials in maize
    • Westgate, M.E., and J.S. Boyer. 1985. Osmotic adjustment and the inhibition of leaf, root, stem and silk growth at low water potentials in maize. Planta 164:540-549. doi:10.1007/BF00395973
    • (1985) Planta , vol.164 , pp. 540-549
    • Westgate, M.E.1    Boyer, J.S.2


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