-
1
-
-
72949091232
-
Bacterial community variation in human body habitats across space and time
-
Costello EK, Lauber CL, Hamady M, Fierer N, Gordon JI, Knight R: Bacterial community variation in human body habitats across space and time. Science. 2009, 326 (5960): 1694-1697.
-
(2009)
Science
, vol.326
, Issue.5960
, pp. 1694-1697
-
-
Costello, E.K.1
Lauber, C.L.2
Hamady, M.3
Fierer, N.4
Gordon, J.I.5
Knight, R.6
-
2
-
-
70449713952
-
The NIH Human Microbiome Project
-
Peterson J, Garges S, Giovanni M, McInnes P, Wang L, Schloss JA, Bonazzi V, McEwen JE, Wetterstrand KA, Deal C, Baker CC, Di Francesco V, Howcroft TK, Karp RW, Lunsford RD, Wellington CR, Belachew T, Wright M, Giblin C, David H, Mills M, Salomon R, Mullins C, Akolkar B, Begg L, Davis C, Grandison L, Humble M, Khalsa J, Little AR, Peavy H, Pontzer C, Portnoy M, Sayre MH, Starke-Reed P, Zakhari S, Read J, Watson B, Guyer M: The NIH Human Microbiome Project. Genome Res. 2009, 19 (12): 2317-2323.
-
(2009)
Genome Res
, vol.19
, Issue.12
, pp. 2317-2323
-
-
Peterson, J.1
Garges, S.2
Giovanni, M.3
McInnes, P.4
Wang, L.5
Schloss, J.A.6
Bonazzi, V.7
McEwen, J.E.8
Wetterstrand, K.A.9
Deal, C.10
Baker, C.C.11
Di Francesco, V.12
Howcroft, T.K.13
Karp, R.W.14
Lunsford, R.D.15
Wellington, C.R.16
Belachew, T.17
Wright, M.18
Giblin, C.19
David, H.20
Mills, M.21
Salomon, R.22
Mullins, C.23
Akolkar, B.24
Begg, L.25
Davis, C.26
Grandison, L.27
Humble, M.28
Khalsa, J.29
Little, A.R.30
Peavy, H.31
Pontzer, C.32
Portnoy, M.33
Sayre, M.H.34
Starke-Reed, P.35
Zakhari, S.36
Read, J.37
Watson, B.38
Guyer, M.39
more..
-
3
-
-
35348968286
-
The human microbiome project
-
Turnbaugh PJ, Ley RE, Hamady M, Fraser-Liggett CM, Knight R, Gordon JI: The human microbiome project. Nature. 2007, 449 (7164): 804-810.
-
(2007)
Nature
, vol.449
, Issue.7164
, pp. 804-810
-
-
Turnbaugh, P.J.1
Ley, R.E.2
Hamady, M.3
Fraser-Liggett, C.M.4
Knight, R.5
Gordon, J.I.6
-
4
-
-
69949111703
-
The core gut microbiome, energy balance and obesity
-
Turnbaugh PJ, Gordon JI: The core gut microbiome, energy balance and obesity. J Physiol (Lond). 2009, 587 (Pt 17): 4153-4158.
-
(2009)
J Physiol (Lond)
, vol.587
, pp. 4153-4158
-
-
Turnbaugh, P.J.1
Gordon, J.I.2
-
5
-
-
78650279484
-
Bacterial vaginosis: identifying research gaps proceedings of a workshop sponsored by DHHS/NIH/NIAID
-
Marrazzo JM, Martin DH, Watts DH, Schulte J, Sobel JD, Hillier SL, Deal C, Fredricks DN: Bacterial vaginosis: identifying research gaps proceedings of a workshop sponsored by DHHS/NIH/NIAID. Sex Transm Dis. 2010, 37 (12): 732-744.
-
(2010)
Sex Transm Dis
, vol.37
, Issue.12
, pp. 732-744
-
-
Marrazzo, J.M.1
Martin, D.H.2
Watts, D.H.3
Schulte, J.4
Sobel, J.D.5
Hillier, S.L.6
Deal, C.7
Fredricks, D.N.8
-
6
-
-
77950251400
-
A human gut microbial gene catalogue established by metagenomic sequencing
-
Qin J, Li R, Raes J, Arumugam M, Burgdorf KS, Manichanh C, Nielsen T, Pons N, Levenez F, Yamada T, Mende DR, Li J, Xu J, Li S, Li D, Cao J, Wang B, Liang H, Zheng H, Xie Y, Tap J, Lepage P, Bertalan M, Batto JM, Hansen T, Le Paslier D, Linneberg A, Nielsen HB, Pelletier E, Renault P, Sicheritz-Ponten T, Turner K, Zhu H, Yu C, Li S, Jian M, Zhou Y, Li Y, Zhang X, Li S, Qin N, Yang H, Wang J, Brunak S, Dore J, Guarner F, Kristiansen K, Pedersen O, Parkhill J, Weissenbach J, Bork P, Ehrlich SD, Wang J, Antolin M, Artiguenave F, Blottiere H, Borruel N, Bruls T, Casellas F, Chervaux C, Cultrone A, Delorme C, Denariaz G, Dervyn R, Forte M, Friss C, van de Guchte M, Guedon E, Haimet F, Jamet A, Juste C, Kaci G, Kleerebezem M, Knol J, Kristensen M, Layec S, Le Roux K, Leclerc M, Maguin E, Minardi RM, Oozeer R, Rescigno M, Sanchez N, Tims S, Torrejon T, Varela E, de Vos W, Winogradsky Y, Zoetendal E: A human gut microbial gene catalogue established by metagenomic sequencing. Nature. 2010, 464 (7285): 59-65.
-
(2010)
Nature
, vol.464
, Issue.7285
, pp. 59-65
-
-
Qin, J.1
Li, R.2
Raes, J.3
Arumugam, M.4
Burgdorf, K.S.5
Manichanh, C.6
Nielsen, T.7
Pons, N.8
Levenez, F.9
Yamada, T.10
Mende, D.R.11
Li, J.12
Xu, J.13
Li, S.14
Li, D.15
Cao, J.16
Wang, B.17
Liang, H.18
Zheng, H.19
Xie, Y.20
Tap, J.21
Lepage, P.22
Bertalan, M.23
Batto, J.M.24
Hansen, T.25
Le Paslier, D.26
Linneberg, A.27
Nielsen, H.B.28
Pelletier, E.29
Renault, P.30
Sicheritz-Ponten, T.31
Turner, K.32
Zhu, H.33
Yu, C.34
Li, S.35
Jian, M.36
Zhou, Y.37
Li, Y.38
Zhang, X.39
Li, S.40
Qin, N.41
Yang, H.42
Wang, J.43
Brunak, S.44
Dore, J.45
Guarner, F.46
Kristiansen, K.47
Pedersen, O.48
Parkhill, J.49
Weissenbach, J.50
Bork, P.51
Ehrlich, S.D.52
Wang, J.53
Antolin, M.54
Artiguenave, F.55
Blottiere, H.56
Borruel, N.57
Bruls, T.58
Casellas, F.59
Chervaux, C.60
Cultrone, A.61
Delorme, C.62
Denariaz, G.63
Dervyn, R.64
Forte, M.65
Friss, C.66
van de Guchte, M.67
Guedon, E.68
Haimet, F.69
Jamet, A.70
Juste, C.71
Kaci, G.72
Kleerebezem, M.73
Knol, J.74
Kristensen, M.75
Layec, S.76
Le Roux, K.77
Leclerc, M.78
Maguin, E.79
Minardi, R.M.80
Oozeer, R.81
Rescigno, M.82
Sanchez, N.83
Tims, S.84
Torrejon, T.85
Varela, E.86
de Vos, W.87
Winogradsky, Y.88
Zoetendal, E.89
more..
-
7
-
-
84862276328
-
Structure, function and diversity of the healthy human microbiome
-
Huttenhower C, Gevers D, Knight R, Abubucker S, Badger JH, Chinwalla AT, Creasy HH, Earl AM, FitzGerald MG, Fulton RS, Giglio MG, Hallsworth-Pepin K, Lobos EA, Madupu R, Magrini V, Martin JC, Mitreva M, Muzny DM, Sodergren EJ, Versalovic J, Wollam AM, Worley KC, Wortman JR, Young SK, Zeng Q, Aagaard KM, Abolude OO, Allen-Vercoe E, Alm EJ, Alvarado L, Andersen GL, Anderson S, Appelbaum E, Arachchi HM, Armitage G, Arze CA, Ayvaz T, Baker CC, Begg L, Belachew T, Bhonagiri V, Bihan M, Blaser MJ, Bloom T, Bonazzi V, Brooks J, Buck GA, Buhay CJ, Busam DA, Campbell JL, Canon SR, Cantarel BL, Chain PS, Chen IM, Chen L, Chhibba S, Chu K, Ciulla DM, Clemente JC, Clifton SW, Conlan S, Crabtree J, Cutting MA, Davidovics NJ, Davis CC, DeSantis TZ, Deal C, Delehaunty KD, Dewhirst FE, Deych E, Ding Y, Dooling DJ, Dugan SP, Dunne WM, Durkin A, Edgar RC, Erlich RL, Farmer CN, Farrell RM, Faust K, Feldgarden M, Felix VM, Fisher S, Fodor AA, Forney LJ, Foster L, Di Francesco V, Friedman J, Friedrich DC, Fronick CC, Fulton LL, Gao H, Garcia N, Giannoukos G, Giblin C, Giovanni MY, Goldberg JM, Goll J, Gonzalez A, Griggs A, Gujja S, Haake SK, Haas BJ, Hamilton HA, Harris EL, Hepburn TA, Herter B, Hoffmann DE, Holder ME, Howarth C, Huang KH, Huse SM, Izard J, Jansson JK, Jiang H, Jordan C, Joshi V, Katancik JA, Keitel WA, Kelley ST, Kells C, King NB, Knights D, Kong HH, Koren O, Koren S, Kota KC, Kovar CL, Kyrpides NC, La Rosa PS, Lee SL, Lemon KP, Lennon N, Lewis CM, Lewis L, Ley RE, Li K, Liolios K, Liu B, Liu Y, Lo CC, Lozupone CA, Lunsford R, Madden T, Mahurkar AA, Mannon PJ, Mardis ER, Markowitz VM, Mavromatis K, McCorrison JM, McDonald D, McEwen J, McGuire AL, McInnes P, Mehta T, Mihindukulasuriya KA, Miller JR, Minx PJ, Newsham I, Nusbaum C, O'Laughlin M, Orvis J, Pagani I, Palaniappan K, Patel SM, Pearson M, Peterson J, Podar M, Pohl C, Pollard KS, Pop M, Priest ME, Proctor LM, Qin X, Raes J, Ravel J, Reid JG, Rho M, Rhodes R, Riehle KP, Rivera MC, Rodriguez-Mueller B, Rogers YH, Ross MC, Russ C, Sanka RK, Sankar P, Sathirapongsasuti J, Schloss JA, Schloss PD, Schmidt TM, Scholz M, Schriml L, Schubert AM, Segata N, Segre JA, Shannon WD, Sharp RR, Sharpton TJ, Shenoy N, Sheth NU, Simone GA, Singh I, Smillie CS, Sobel JD, Sommer DD, Spicer P, Sutton GG, Sykes SM, Tabbaa DG, Thiagarajan M, Tomlinson CM, Torralba M, Treangen TJ, Truty RM, Vishnivetskaya TA, Walker J, Wang L, Wang Z, Ward DV, Warren W, Watson MA, Wellington C, Wetterstrand KA, White JR, Wilczek-Boney K, Wu Y, Wylie KM, Wylie T, Yandava C, Ye L, Ye Y, Yooseph S, Youmans BP, Zhang L, Zhou Y, Zhu Y, Zoloth L, Zucker JD, Birren BW, Gibbs RA, Highlander SK, Methe BA, Nelson KE, Petrosino JF, Weinstock GM, Wilson RK, White O: Structure, function and diversity of the healthy human microbiome. Nature. 2012, 486 (7402): 207-214.
-
(2012)
Nature
, vol.486
, Issue.7402
, pp. 207-214
-
-
Huttenhower, C.1
Gevers, D.2
Knight, R.3
Abubucker, S.4
Badger, J.H.5
Chinwalla, A.T.6
Creasy, H.H.7
Earl, A.M.8
FitzGerald, M.G.9
Fulton, R.S.10
Giglio, M.G.11
Hallsworth-Pepin, K.12
Lobos, E.A.13
Madupu, R.14
Magrini, V.15
Martin, J.C.16
Mitreva, M.17
Muzny, D.M.18
Sodergren, E.J.19
Versalovic, J.20
Wollam, A.M.21
Worley, K.C.22
Wortman, J.R.23
Young, S.K.24
Zeng, Q.25
Aagaard, K.M.26
Abolude, O.O.27
Allen-Vercoe, E.28
Alm, E.J.29
Alvarado, L.30
Andersen, G.L.31
Anderson, S.32
Appelbaum, E.33
Arachchi, H.M.34
Armitage, G.35
Arze, C.A.36
Ayvaz, T.37
Baker, C.C.38
Begg, L.39
Belachew, T.40
Bhonagiri, V.41
Bihan, M.42
Blaser, M.J.43
Bloom, T.44
Bonazzi, V.45
Brooks, J.46
Buck, G.A.47
Buhay, C.J.48
Busam, D.A.49
Campbell, J.L.50
Canon, S.R.51
Cantarel, B.L.52
Chain, P.S.53
Chen, I.M.54
Chen, L.55
Chhibba, S.56
Chu, K.57
Ciulla, D.M.58
Clemente, J.C.59
Clifton, S.W.60
Conlan, S.61
Crabtree, J.62
Cutting, M.A.63
Davidovics, N.J.64
Davis, C.C.65
DeSantis, T.Z.66
Deal, C.67
Delehaunty, K.D.68
Dewhirst, F.E.69
Deych, E.70
Ding, Y.71
Dooling, D.J.72
Dugan, S.P.73
Dunne, W.M.74
Durkin, A.75
Edgar, R.C.76
Erlich, R.L.77
Farmer, C.N.78
Farrell, R.M.79
Faust, K.80
Feldgarden, M.81
Felix, V.M.82
Fisher, S.83
Fodor, A.A.84
Forney, L.J.85
Foster, L.86
Di Francesco, V.87
Friedman, J.88
more..
-
8
-
-
35748959318
-
What's in the mix: phylogenetic classification of metagenome sequence samples
-
McHardy AC, Rigoutsos I: What's in the mix: phylogenetic classification of metagenome sequence samples. Curr Opin Microbiol. 2007, 10 (5): 499-503.
-
(2007)
Curr Opin Microbiol
, vol.10
, Issue.5
, pp. 499-503
-
-
McHardy, A.C.1
Rigoutsos, I.2
-
9
-
-
29144504177
-
At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies
-
Ashelford KE, Chuzhanova NA, Fry JC, Jones AJ, Weightman AJ: At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies. Appl Environ Microbiol. 2005, 71 (12): 7724-7736.
-
(2005)
Appl Environ Microbiol
, vol.71
, Issue.12
, pp. 7724-7736
-
-
Ashelford, K.E.1
Chuzhanova, N.A.2
Fry, J.C.3
Jones, A.J.4
Weightman, A.J.5
-
10
-
-
58149200948
-
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
-
Cole JR, Wang Q, Cardenas E, Fish J, Chai B, Farris RJ, Kulam-Syed-Mohideen AS, McGarrell DM, Marsh T, Garrity GM, Tiedje JM: The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucl Acids Res. 2009, 37 (Database): 141-145.
-
(2009)
Nucl Acids Res
, vol.37
, Issue.DATABASE
, pp. 141-145
-
-
Cole, J.R.1
Wang, Q.2
Cardenas, E.3
Fish, J.4
Chai, B.5
Farris, R.J.6
Kulam-Syed-Mohideen, A.S.7
McGarrell, D.M.8
Marsh, T.9
Garrity, G.M.10
Tiedje, J.M.11
-
11
-
-
0021012648
-
Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids
-
Woese CR, Gutell R, Gupta R, Noller HF: Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids. Microbiol Rev. 1983, 47 (4): 621-669.
-
(1983)
Microbiol Rev
, vol.47
, Issue.4
, pp. 621-669
-
-
Woese, C.R.1
Gutell, R.2
Gupta, R.3
Noller, H.F.4
-
12
-
-
0026585263
-
How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identity
-
Fox GE, Wisotzkey JD, Jurtshuk P, Fox GE: How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identity. Int J Syst Bacteriol. 1992, 42 (1): 166-170.
-
(1992)
Int J Syst Bacteriol
, vol.42
, Issue.1
, pp. 166-170
-
-
Fox, G.E.1
Wisotzkey, J.D.2
Jurtshuk, P.3
Fox, G.E.4
-
13
-
-
77955085506
-
Ribosomal RNA diversity predicts genome diversity in gut bacteria and their relatives
-
Zaneveld JR, Lozupone C, Gordon JI, Knight R: Ribosomal RNA diversity predicts genome diversity in gut bacteria and their relatives. Nucleic Acids Res. 2010, 38 (12): 3869-3879.
-
(2010)
Nucleic Acids Res
, vol.38
, Issue.12
, pp. 3869-3879
-
-
Zaneveld, J.R.1
Lozupone, C.2
Gordon, J.I.3
Knight, R.4
-
14
-
-
73949111750
-
Bacterial competition: surviving and thriving in the microbial jungle
-
Hibbing ME, Fuqua C, Parsek MR, Peterson SB: Bacterial competition: surviving and thriving in the microbial jungle. Nat Rev Microbiol. 2010, 8 (1): 15-25.
-
(2010)
Nat Rev Microbiol
, vol.8
, Issue.1
, pp. 15-25
-
-
Hibbing, M.E.1
Fuqua, C.2
Parsek, M.R.3
Peterson, S.B.4
-
15
-
-
15444362001
-
Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
-
Schloss PD, Handelsman J: Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl Environ Microbiol. 2005, 71 (3): 1501-1506.
-
(2005)
Appl Environ Microbiol
, vol.71
, Issue.3
, pp. 1501-1506
-
-
Schloss, P.D.1
Handelsman, J.2
-
16
-
-
84884127512
-
Predictive functional profiling of microbial communities using 16s rrna marker gene sequences
-
Langille MG, Zaneveld J, Caporaso JG, McDonald D, Knights D, Reyes JA, Clemente JC, Burkepile DE, Thurber RLV, Knight R, et al: Predictive functional profiling of microbial communities using 16s rrna marker gene sequences. Nature biotechnology. 2013, 31 (9): 814-821.
-
(2013)
Nature biotechnology
, vol.31
, Issue.9
, pp. 814-821
-
-
Langille, M.G.1
Zaneveld, J.2
Caporaso, J.G.3
McDonald, D.4
Knights, D.5
Reyes, J.A.6
Clemente, J.C.7
Burkepile, D.E.8
Thurber, R.L.V.9
Knight, R.10
-
17
-
-
0001463548
-
Nonparametric-estimation of the number of classes in a population
-
Chao A: Nonparametric-estimation of the number of classes in a population. Scandinavian Journal of Statistics. 1984, 11 (4): 265-270.
-
(1984)
Scandinavian Journal of Statistics
, vol.11
, Issue.4
, pp. 265-270
-
-
Chao, A.1
-
19
-
-
84866146940
-
Diversity, stability and resilience of the human gut microbiota
-
Lozupone CA, Stombaugh JI, Gordon JI, Jansson JK, Knight R: Diversity, stability and resilience of the human gut microbiota. Nature. 2012, 489 (7415): 220-230.
-
(2012)
Nature
, vol.489
, Issue.7415
, pp. 220-230
-
-
Lozupone, C.A.1
Stombaugh, J.I.2
Gordon, J.I.3
Jansson, J.K.4
Knight, R.5
-
20
-
-
84888865593
-
Differential abundance analysis for microbial marker-gene surveys
-
Paulson JN, Stine OC, Bravo HC, Pop M: Differential abundance analysis for microbial marker-gene surveys. Nat Methods. 2013, 10 (12): 1200-1202.
-
(2013)
Nat Methods
, vol.10
, Issue.12
, pp. 1200-1202
-
-
Paulson, J.N.1
Stine, O.C.2
Bravo, H.C.3
Pop, M.4
-
21
-
-
84863304839
-
qgraph: Network visualizations of relationships in psychometric data
-
Epskamp S, Cramer AOJ, Waldorp LJ, Schmittmann VD, Borsboom D: qgraph: Network visualizations of relationships in psychometric data. Journal of Statistical Software. 2012, 48 (4): 1-18.
-
(2012)
Journal of Statistical Software
, vol.48
, Issue.4
, pp. 1-18
-
-
Epskamp, S.1
Cramer, A.O.J.2
Waldorp, L.J.3
Schmittmann, V.D.4
Borsboom, D.5
-
23
-
-
0030240869
-
Social network analysis: An approach and technique for the study of information exchange
-
Haythornthwaite C: Social network analysis: An approach and technique for the study of information exchange. Library & Information Science Research. 1996, 18 (4): 323-42.
-
(1996)
Library & Information Science Research
, vol.18
, Issue.4
, pp. 323-342
-
-
Haythornthwaite, C.1
-
25
-
-
37649028224
-
Finding and evaluating community structure in networks
-
Newman MEJ, Girvan M: Finding and evaluating community structure in networks. Physical review E. 2004, 69: [ http://dx.doi.org/10.1103/PhysRevE.69.026113 ]
-
(2004)
Physical review E
, pp. 69
-
-
Newman, M.E.J.1
Girvan, M.2
-
26
-
-
0002806618
-
Multilevel k-way partitioning scheme for irregular graphs
-
Karypis G, Kumar V: Multilevel k-way partitioning scheme for irregular graphs. J of Parallel and Distr Computing. 1998, 48 (1): 96-129.
-
(1998)
J of Parallel and Distr Computing
, vol.48
, Issue.1
, pp. 96-129
-
-
Karypis, G.1
Kumar, V.2
-
27
-
-
0031176702
-
A simple min-cut algorithm
-
Stoer M, Wagner F: A simple min-cut algorithm. J ACM. 1997, 44 (4): 585-591.
-
(1997)
J ACM
, vol.44
, Issue.4
, pp. 585-591
-
-
Stoer, M.1
Wagner, F.2
-
29
-
-
23944458138
-
A general framework for weighted gene co-expression network analysis
-
Zhang B, Horvath S: A general framework for weighted gene co-expression network analysis. Stat Appl Genet Mol Biol. 2005, 4: 17-
-
(2005)
Stat Appl Genet Mol Biol
, vol.4
, pp. 17
-
-
Zhang, B.1
Horvath, S.2
-
30
-
-
0012797660
-
WCA: A weighted clustering algorithm for mobile ad hoc networks
-
Chatterjee M, Das S, Turgut D: WCA: A weighted clustering algorithm for mobile ad hoc networks. Cluster Computing. 2002, 5 (2): 193-204.
-
(2002)
Cluster Computing
, vol.5
, Issue.2
, pp. 193-204
-
-
Chatterjee, M.1
Das, S.2
Turgut, D.3
-
31
-
-
1642308591
-
The architecture of complex weighted networks
-
Barrat A, Barthelemy M, Pastor-Satorras R, Vespignani A: The architecture of complex weighted networks. Proc Natl Acad Sci USA. 2004, 101 (11): 3747-3752.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, Issue.11
, pp. 3747-3752
-
-
Barrat, A.1
Barthelemy, M.2
Pastor-Satorras, R.3
Vespignani, A.4
-
35
-
-
0034659448
-
An algorithm for clustering cDNA fingerprints
-
Hartuv E, Schmitt AO, Lange J, Meier-Ewert S, Lehrach H, Shamir R: An algorithm for clustering cDNA fingerprints. Genomics. 2000, 66 (3): 249-256.
-
(2000)
Genomics
, vol.66
, Issue.3
, pp. 249-256
-
-
Hartuv, E.1
Schmitt, A.O.2
Lange, J.3
Meier-Ewert, S.4
Lehrach, H.5
Shamir, R.6
-
36
-
-
0034515528
-
A clustering algorithm based on graph connectivity
-
Hartuv E, Shamir R: A clustering algorithm based on graph connectivity. Information Processing Letters. 2000, 76 (4-6): 175-181.
-
(2000)
Information Processing Letters
, vol.76
, Issue.4-6
, pp. 175-181
-
-
Hartuv, E.1
Shamir, R.2
-
37
-
-
0036529479
-
An efficient algorithm for large-scale detection of protein families
-
Enright AJ, Van Dongen S, Ouzounis CA: An efficient algorithm for large-scale detection of protein families. Nucleic acids research. 2002, 30 (7): 1575-1584.
-
(2002)
Nucleic acids research
, vol.30
, Issue.7
, pp. 1575-1584
-
-
Enright, A.J.1
Van Dongen, S.2
Ouzounis, C.A.3
-
38
-
-
84864579031
-
Microbial co-occurrence relationships in the human microbiome
-
Faust K, Sathirapongsasuti JF, Izard J, Segata N, Gevers D, Raes J, Huttenhower C: Microbial co-occurrence relationships in the human microbiome. PLoS Computational Biology. 2012, 8 (7): 1002606-
-
(2012)
PLoS Computational Biology
, vol.8
, Issue.7
, pp. 1002606
-
-
Faust, K.1
Sathirapongsasuti, J.F.2
Izard, J.3
Segata, N.4
Gevers, D.5
Raes, J.6
Huttenhower, C.7
-
39
-
-
84865733148
-
Inferring correlation networks from genomic survey data
-
Friedman J, Alm EJ: Inferring correlation networks from genomic survey data. PLoS Computational Biology. 2012, 8 (9): 1002687-
-
(2012)
PLoS Computational Biology
, vol.8
, Issue.9
, pp. 1002687
-
-
Friedman, J.1
Alm, E.J.2
-
41
-
-
0000947357
-
Approximating clique and biclique problems
-
Hochbaum DS: Approximating clique and biclique problems. Journal of Algorithms. 1998, 29 (1): 174-200.
-
(1998)
Journal of Algorithms
, vol.29
, Issue.1
, pp. 174-200
-
-
Hochbaum, D.S.1
-
42
-
-
11244306358
-
Discovering statistically significant biclusters in gene expression data
-
Tanay A, Sharan R, Shamir R: Discovering statistically significant biclusters in gene expression data. Bioinformatics. 2002, 18 (suppl 1): 136-144.
-
(2002)
Bioinformatics
, vol.18
, pp. 136-144
-
-
Tanay, A.1
Sharan, R.2
Shamir, R.3
-
43
-
-
85018193449
-
Better primer design for metagenomics applications by increasing taxonomic distinguishability
-
Jaric M, Segal J, Silva-Herzog E, Schneper L, Mathee K, Narasimhan G: Better primer design for metagenomics applications by increasing taxonomic distinguishability. BMC Proc. 2013, 7 (Suppl 7): 4-
-
(2013)
BMC Proc
, vol.7
, pp. 4
-
-
Jaric, M.1
Segal, J.2
Silva-Herzog, E.3
Schneper, L.4
Mathee, K.5
Narasimhan, G.6
-
44
-
-
33947148582
-
Degenerate primer design via clustering
-
Wei X, Kuhn DN, Narasimhan G: Degenerate primer design via clustering. Bioinformatics Conference, 2003 CSB 2003 Proceedings of the 2003 IEEE. 2003, IEEE, 75-83.
-
(2003)
Bioinformatics Conference, 2003 CSB 2003 Proceedings of the 2003 IEEE IEEE
, pp. 75-83
-
-
Wei, X.1
Kuhn, D.N.2
Narasimhan, G.3
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