-
1
-
-
33845454742
-
Gut-associated bacterial microbiota in paediatric patients with inflammatory bowel disease
-
Conte, M.P.; Schippa, S.; Zamboni, I.; Penta, M.; Chiarini, F.; Seganti, L.; Osborn, J.; Falconieri, P.; Borrelli, O.; Cucchiara, S. Gut-associated bacterial microbiota in paediatric patients with inflammatory bowel disease. Gut 2006, 55, 1760–1767.
-
(2006)
Gut
, vol.55
, pp. 1760-1767
-
-
Conte, M.P.1
Schippa, S.2
Zamboni, I.3
Penta, M.4
Chiarini, F.5
Seganti, L.6
Osborn, J.7
Falconieri, P.8
Borrelli, O.9
Cucchiara, S.10
-
2
-
-
35348857386
-
Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases
-
Frank, D.N.; St Amand, A.L.; Feldman, R.A.; Boedeker, E.C.; Harpaz, N.; Pace, N.R. Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proc. Natl. Acad. Sci. USA 2007, 104, 13780–13785.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 13780-13785
-
-
Frank, D.N.1
St Amand, A.L.2
Feldman, R.A.3
Boedeker, E.C.4
Harpaz, N.5
Pace, N.R.6
-
3
-
-
34547989132
-
Qualitative and quantitative analyses of the bifidobacterial microbiota in the colonic mucosa of patients with colorectal cancer, diverticulitis and inflammatory bowel disease
-
Gueimonde, M.; Ouwehand, A.; Huhtinen, H.; Salminen, E.; Salminen, S. Qualitative and quantitative analyses of the bifidobacterial microbiota in the colonic mucosa of patients with colorectal cancer, diverticulitis and inflammatory bowel disease. World J. Gastroenterol. 2007, 13, 3985–3989.
-
(2007)
World J. Gastroenterol
, vol.13
, pp. 3985-3989
-
-
Gueimonde, M.1
Ouwehand, A.2
Huhtinen, H.3
Salminen, E.4
Salminen, S.5
-
4
-
-
79959961092
-
Twin study indicates loss of interaction between microbiota and mucosa of patients with ulcerative colitis
-
Lepage, P.; Hösler, R.; Spehlmann, M.E.; Rehman, A.; Zvirbliene, A.; Begun, A.; Ott, S.; Kupcinskas, L.; Doré, J.; Raedler, A.; et al. Twin study indicates loss of interaction between microbiota and mucosa of patients with ulcerative colitis. Gastroenterology 2011, 141, 227–236.
-
(2011)
Gastroenterology
, vol.141
, pp. 227-236
-
-
Lepage, P.1
Hösler, R.2
Spehlmann, M.E.3
Rehman, A.4
Zvirbliene, A.5
Begun, A.6
Ott, S.7
Kupcinskas, L.8
Doré, J.9
Raedler, A.10
-
5
-
-
78149341679
-
Ulcerative colitis and irritable bowel patients exhibit distinct abnormalities of the gut microbiota
-
Noor, S.O.; Ridgway, K.; Scovell, L.; Kemsley, E.K.; Lund, E.K.; Jamieson, C.; Johnson, I.T.; Narbad, A. Ulcerative colitis and irritable bowel patients exhibit distinct abnormalities of the gut microbiota. BMC Gastroenterol. 2010, 10, 134.
-
(2010)
BMC Gastroenterol
, vol.10
, pp. 134
-
-
Noor, S.O.1
Ridgway, K.2
Scovell, L.3
Kemsley, E.K.4
Lund, E.K.5
Jamieson, C.6
Johnson, I.T.7
Narbad, A.8
-
6
-
-
2342442430
-
Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease
-
Ott, S.J.; Musfeldt, M.; Wenderoth, D.F.; Hampe, J.; Brant, O.; Fölsch, U.R.; Timmis, K.N.; Schreiber, S. Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease. Gut 2004, 53, 685–693.
-
(2004)
Gut
, vol.53
, pp. 685-693
-
-
Ott, S.J.1
Musfeldt, M.2
Wenderoth, D.F.3
Hampe, J.4
Brant, O.5
Fölsch, U.R.6
Timmis, K.N.7
Schreiber, S.8
-
7
-
-
44349164525
-
Imbalance in intestinal microflora constitution could be involved in the pathogenesis of inflammatory bowel disease
-
Takaishi, H.; Matsuki, T.; Nakazawa, A.; Takada, T.; Kado, S.; Asahara, T.; Kamada, N.; Sakuraba, A.; Yajima, T.; Higuchi, H.; et al. Imbalance in intestinal microflora constitution could be involved in the pathogenesis of inflammatory bowel disease. Int. J. Med. Microbiol. 2008, 298, 463–472.
-
(2008)
Int. J. Med. Microbiol.
, vol.298
, pp. 463-472
-
-
Takaishi, H.1
Matsuki, T.2
Nakazawa, A.3
Takada, T.4
Kado, S.5
Asahara, T.6
Kamada, N.7
Sakuraba, A.8
Yajima, T.9
Higuchi, H.10
-
8
-
-
84900452663
-
Induction of bacterial antigen-specific colitis by a simplified human microbiota consortium in gnotobiotic interleukin-10
-
-/- mice. Infect. Immun. 2014, 82, 2239–2246.
-
(2014)
Infect. Immun
, vol.82
, pp. 2239-2246
-
-
Eun, C.S.1
Mishima, Y.2
Wohlgemuth, S.3
Liu, B.4
Bower, M.5
Carroll, I.M.6
Sartor, R.B.7
-
10
-
-
78650099360
-
Disease phenotype and genotype are associated with shifts in intestinal-associated microbiota in inflammatory bowel diseases
-
Frank, D.; Robertson, C.; Hamm, C.; Kpadeh, Z.; Zhang, T.; Chen, H.; Zhu, W.; Sartor, R.; Boedeker, E.; Harpaz, N.; et al. Disease phenotype and genotype are associated with shifts in intestinal-associated microbiota in inflammatory bowel diseases. Inflamm. Bowel Dis. 2011, 17, 179–184.
-
(2011)
Inflamm. Bowel Dis
, vol.17
, pp. 179-184
-
-
Frank, D.1
Robertson, C.2
Hamm, C.3
Kpadeh, Z.4
Zhang, T.5
Chen, H.6
Zhu, W.7
Sartor, R.8
Boedeker, E.9
Harpaz, N.10
-
11
-
-
0032412057
-
Resident enteric bacteria are necessary for development of spontaneous colitis and immune system activation in interleukin-10-deficient mice
-
Sellon, R.K.; Tonkonogy, S.; Schultz, M.; Dieleman, L.A.; Grenther, W.; Balish, E.; Rennick, D.M.; Sartor, R.B. Resident enteric bacteria are necessary for development of spontaneous colitis and immune system activation in interleukin-10-deficient mice. Infect. Immun. 1998, 66, 5224–5231.
-
(1998)
Infect. Immun
, vol.66
, pp. 5224-5231
-
-
Sellon, R.K.1
Tonkonogy, S.2
Schultz, M.3
Dieleman, L.A.4
Grenther, W.5
Balish, E.6
Rennick, D.M.7
Sartor, R.B.8
-
12
-
-
0027521572
-
Interleukin-10-deficient mice develop chronic enterocolitis
-
Kuhn, R.; Lohler, J.; Rennick, D.; Rajewsky, K.; Muller, W. Interleukin-10-deficient mice develop chronic enterocolitis. Cell 1993, 75, 263–274.
-
(1993)
Cell
, vol.75
, pp. 263-274
-
-
Kuhn, R.1
Lohler, J.2
Rennick, D.3
Rajewsky, K.4
Muller, W.5
-
13
-
-
0036087411
-
Enterococcus faecalis induces inflammatory bowel disease in interleukin-10 knockout mice
-
Balish, E.; Warner, T. Enterococcus faecalis induces inflammatory bowel disease in interleukin-10 knockout mice. Am. J. Pathol. 2002, 160, 2253–2257.
-
(2002)
Am. J. Pathol
, vol.160
, pp. 2253-2257
-
-
Balish, E.1
Warner, T.2
-
14
-
-
17144383927
-
Variable phenotypes of enterocolitis in interleukin 10-deficient mice monoassociated with two different commensal bacteria
-
Kim, S.C.; Tonkonogy, S.L.; Albright, C.A.; Tsang, J.; Balish, E.J.; Braun, J.; Huycke, M.M.; Sartor, R.B. Variable phenotypes of enterocolitis in interleukin 10-deficient mice monoassociated with two different commensal bacteria. Gastroenterology 2005, 128, 891–906.
-
(2005)
Gastroenterology
, vol.128
, pp. 891-906
-
-
Kim, S.C.1
Tonkonogy, S.L.2
Albright, C.A.3
Tsang, J.4
Balish, E.J.5
Braun, J.6
Huycke, M.M.7
Sartor, R.B.8
-
15
-
-
38049004922
-
Dual-association of gnotobiotic IL-10-/- mice with 2 nonpathogenic commensal bacteria induces aggressive pancolitis
-
Kim, S.C.; Tonkonogy, S.L.; Karrasch, T.; Jobin, C.; Sartor, R.B. Dual-association of gnotobiotic IL-10-/- mice with 2 nonpathogenic commensal bacteria induces aggressive pancolitis. Inflamm. Bowel Dis. 2007, 13, 1457–1466.
-
(2007)
Inflamm. Bowel Dis.
, vol.13
, pp. 1457-1466
-
-
Kim, S.C.1
Tonkonogy, S.L.2
Karrasch, T.3
Jobin, C.4
Sartor, R.B.5
-
16
-
-
0035315807
-
Molecular screening of Enterococcus virulence determinants and potential for genetic exchange between food and medical isolates
-
Eaton, T.J.; Gasson, M.J. Molecular screening of Enterococcus virulence determinants and potential for genetic exchange between food and medical isolates. Appl. Environ. Microbiol. 2001, 67, 1628–1635.
-
(2001)
Appl. Environ. Microbiol
, vol.67
, pp. 1628-1635
-
-
Eaton, T.J.1
Gasson, M.J.2
-
17
-
-
0028172594
-
Virulence of enterococci
-
Jett, B.D.; Huycke, M.M.; Gilmore, M.S. Virulence of enterococci. Clin. Microbiol. Rev. 1994, 7, 462–478.
-
(1994)
Clin. Microbiol. Rev
, vol.7
, pp. 462-478
-
-
Jett, B.D.1
Huycke, M.M.2
Gilmore, M.S.3
-
18
-
-
0001845283
-
Normal indigenous intestinal flora
-
Hentges, D.J., Ed.; Academic Press: New York, NY, USA
-
Finegold, S.M.; Sutter, V.L.; Mathisen, G.E. Normal indigenous intestinal flora. In Human Intestinal Microflora in Health and Disease; Hentges, D.J., Ed.; Academic Press: New York, NY, USA, 1983; pp. 3–31.
-
(1983)
Human Intestinal Microflora in Health and Disease
, pp. 3-31
-
-
Finegold, S.M.1
Sutter, V.L.2
Mathisen, G.E.3
-
19
-
-
0003254539
-
Enterococci as members of the intestinal microflora of humans
-
Pathogenesis, Molecular Biology, and Antibiotic Resistance; Gilmore, M.S., Clewell, D.B., Courvalin, P.M., Dunny, G.M., Murray, B.E., Rice, L.B., Eds.; ASM Press: Washington DC, USA
-
Tannock, G.W.; Cook, G. Enterococci as members of the intestinal microflora of humans. In The Enterococci: Pathogenesis, Molecular Biology, and Antibiotic Resistance; Gilmore, M.S., Clewell, D.B., Courvalin, P.M., Dunny, G.M., Murray, B.E., Rice, L.B., Eds.; ASM Press: Washington DC, USA, 2002.
-
(2002)
The Enterococci
-
-
Tannock, G.W.1
Cook, G.2
-
20
-
-
77954559243
-
Changes in colon gene expression associated with increased colon inflammation in interleukin-10 gene-deficient mice inoculated with Enterococcus species
-
Barnett, M.P.; McNabb, W.C.; Cookson, A.L.; Zhu, S.; Davy, M.; Knoch, B.; Nones, K.; Hodgkinson, A.J.; Roy, N.C. Changes in colon gene expression associated with increased colon inflammation in interleukin-10 gene-deficient mice inoculated with Enterococcus species. BMC Immunol. 2010, 11, 39.
-
(2010)
BMC Immunol
, vol.11
, pp. 39
-
-
Barnett, M.P.1
McNabb, W.C.2
Cookson, A.L.3
Zhu, S.4
Davy, M.5
Knoch, B.6
Nones, K.7
Hodgkinson, A.J.8
Roy, N.C.9
-
21
-
-
34547661062
-
Nutrigenomics applied to an animal model of Inflammatory Bowel Diseases: Transcriptomic analysis of the effects of eicosapentaenoic acid- and arachidonic acid-enriched diets
-
Roy, N.C.; Barnett, M.P.G.; Knoch, B.; Dommels, Y.E.M.; McNabb, W.C. Nutrigenomics applied to an animal model of Inflammatory Bowel Diseases: Transcriptomic analysis of the effects of eicosapentaenoic acid- and arachidonic acid-enriched diets. Mutat. Res. 2007, 622, 103–116.
-
(2007)
Mutat. Res
, vol.622
, pp. 103-116
-
-
Roy, N.C.1
Barnett, M.P.G.2
Knoch, B.3
Dommels, Y.E.M.4
McNabb, W.C.5
-
22
-
-
21344465481
-
Analysis of the large bowel microbiota of colitic mice using PCR/DGGE
-
Bibiloni, R.; Simon, M.; Albright, C.A.; Sartor, B.; Tannock, G. Analysis of the large bowel microbiota of colitic mice using PCR/DGGE. Lett. Appl. Microbiol. 2005, 41, 45–51.
-
(2005)
Lett. Appl. Microbiol
, vol.41
, pp. 45-51
-
-
Bibiloni, R.1
Simon, M.2
Albright, C.A.3
Sartor, B.4
Tannock, G.5
-
24
-
-
77955369664
-
Molecular characterization of the onset and progression of colitis in inoculated interleukin-10 gene-deficient mice: A role for PPARalpha
-
Knoch, B.; Barnett, M.P.; Cooney, J.; McNabb, W.C.; Barraclough, D.; Laing, W.; Zhu, S.; Park, Z.A.; Maclean, P.; Knowles, S.O.; et al. Molecular characterization of the onset and progression of colitis in inoculated interleukin-10 gene-deficient mice: A role for PPARalpha. PPAR Res. 2010, 2010, doi:10.1155/2010/621069.
-
(2010)
PPAR Res
, vol.2010
-
-
Knoch, B.1
Barnett, M.P.2
Cooney, J.3
McNabb, W.C.4
Barraclough, D.5
Laing, W.6
Zhu, S.7
Park, Z.A.8
Maclean, P.9
Knowles, S.O.10
-
25
-
-
77952362187
-
Dietary arachidonic acid-mediated effects on colon inflammation using transcriptome analysis
-
Knoch, B.; Barnett, M.P.; McNabb, W.C.; Zhu, S.; Park, Z.A.; Khan, A.; Roy, N.C. Dietary arachidonic acid-mediated effects on colon inflammation using transcriptome analysis. Mol. Nutr. Food. Res. 2010, 54 (Suppl 1), S62–74.
-
(2010)
Mol. Nutr. Food. Res
, vol.54
, pp. S62-S74
-
-
Knoch, B.1
Barnett, M.P.2
McNabb, W.C.3
Zhu, S.4
Park, Z.A.5
Khan, A.6
Roy, N.C.7
-
26
-
-
61649127766
-
Genome-wide analysis of dietary eicosapentaenoic acid- and oleic acid-induced modulation of colon inflammation in interleukin-10 gene-deficient mice
-
Knoch, B.; Barnett, M.P.G.; Zhu, S.T.; Park, Z.A.; Nones, K.; Dommels, Y.E.M.; Knowles, S.O.; McNabb, W.C.; Roy, N.C. Genome-wide analysis of dietary eicosapentaenoic acid- and oleic acid-induced modulation of colon inflammation in interleukin-10 gene-deficient mice. J. Nutrigenet. Nutrigenomics 2009, 2, 9–28.
-
(2009)
J. Nutrigenet. Nutrigenomics
, vol.2
, pp. 9-28
-
-
Knoch, B.1
Barnett, M.P.G.2
Zhu, S.T.3
Park, Z.A.4
Nones, K.5
Dommels, Y.E.M.6
Knowles, S.O.7
McNabb, W.C.8
Roy, N.C.9
-
27
-
-
84877902715
-
Gene expression changes in the colon epithelium are similar to those of intact colon in the interleukin-10 gene deficient mouse in late inflammation
-
Russ, A.E.; Peters, J.S.; McNabb, W.C.; Barnett, M.P.G.; Anderson, R.C.; Park, Z.; Zhu, S.T.; Maclean, P.; Reynolds, G.W.; Roy, N.C. Gene expression changes in the colon epithelium are similar to those of intact colon in the interleukin-10 gene deficient mouse in late inflammation. PloS One 2013, 8, e63251.
-
(2013)
Plos One
, vol.8
-
-
Russ, A.E.1
Peters, J.S.2
McNabb, W.C.3
Barnett, M.P.G.4
Anderson, R.C.5
Park, Z.6
Zhu, S.T.7
Maclean, P.8
Reynolds, G.W.9
Roy, N.C.10
-
28
-
-
78049501151
-
Diversity of caecal bacteria is altered in interleukin-10 gene-deficient mice before and after colitis onset and when fed polyunsaturated fatty acids
-
Knoch, B.; Nones, K.; Barnett, M.P.; McNabb, W.C.; Roy, N.C. Diversity of caecal bacteria is altered in interleukin-10 gene-deficient mice before and after colitis onset and when fed polyunsaturated fatty acids. Microbiology 2010, 156, 3306–3316.
-
(2010)
Microbiology
, vol.156
, pp. 3306-3316
-
-
Knoch, B.1
Nones, K.2
Barnett, M.P.3
McNabb, W.C.4
Roy, N.C.5
-
29
-
-
79956075540
-
Colonization-induced host-gut microbial metabolic interaction
-
e00271–00210
-
Claus, S.P.; Ellero, S.L.; Berger, B.; Krause, L.; Bruttin, A.; Molina, J.; Paris, A.; Want, E.J.; de Waziers, I.; Cloarec, O.; et al. Colonization-induced host-gut microbial metabolic interaction. MBio 2011, 2, e00271–00210.
-
(2011)
Mbio
, vol.2
-
-
Claus, S.P.1
Ellero, S.L.2
Berger, B.3
Krause, L.4
Bruttin, A.5
Molina, J.6
Paris, A.7
Want, E.J.8
De Waziers, I.9
Cloarec, O.10
-
30
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso, J.G.; Kuczynski, J.; Stombaugh, J.; Bittinger, K.; Bushman, F.D.; Costello, E.K.; Fierer, N.; Pena, A.G.; Goodrich, J.K.; Gordon, J.I.; et al. QIIME allows analysis of high-throughput community sequencing data. Nat. Methods 2010, 7, 335–336.
-
(2010)
Nat. Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Pena, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
-
31
-
-
84962511312
-
-
R Core Team, Vienna, Austria, R Foundation for Statistical Computing
-
R Core Team. R: A language and Environment for Statistical Computing; R Foundation for Statistical Computing: Vienna, Austria, 2010.
-
(2010)
A Language and Environment for Statistical Computing
-
-
-
33
-
-
0034129592
-
Analysis of the fecal microflora of human subjects consuming a probiotic product containing Lactobacillus rhamnosus DR20
-
Tannock, G.W.; Munro, K.; Harmsen, H.J.; Welling, G.W.; Smart, J.; Gopal, P.K. Analysis of the fecal microflora of human subjects consuming a probiotic product containing Lactobacillus rhamnosus DR20. Appl. Environ. Microbiol. 2000, 66, 2578–2588.
-
(2000)
Appl. Environ. Microbiol
, vol.66
, pp. 2578-2588
-
-
Tannock, G.W.1
Munro, K.2
Harmsen, H.J.3
Welling, G.W.4
Smart, J.5
Gopal, P.K.6
-
34
-
-
68049128275
-
Multidrug resistance gene deficient (Mdr1a
-
-/-) mice have an altered caecal microbiota that precedes the onset of intestinal inflammation. J. Appl. Microbiol. 2009, 107, 557–566.
-
(2009)
J. Appl. Microbiol
, vol.107
, pp. 557-566
-
-
Nones, K.1
Knoch, B.2
Dommels, Y.E.3
Paturi, G.4
Butts, C.5
McNabb, W.C.6
Roy, N.C.7
-
35
-
-
84964641245
-
-
Available online, (accessed on 3 February 2014)
-
Oksanen, J.; Blanchet, F.G.; Kindt, R.; Legendre, P.; Minchin, P.R.; O’Hara, R.B.; Simpson, G.L.; Solymos, P.; Stevens, M.H.H.; Wagner, H. Vegan: Community Ecology Package. Available online: http://CRAN.R-project.org/package=vegan (accessed on 3 February 2014).
-
Vegan: Community Ecology Package
-
-
Oksanen, J.1
Blanchet, F.G.2
Kindt, R.3
Legendre, P.4
Minchin, P.R.5
O’Hara, R.B.6
Simpson, G.L.7
Solymos, P.8
Stevens, M.H.H.9
Wagner, H.10
-
36
-
-
82955233474
-
Treating Clostridium difficile infection with fecal microbiota transplantation
-
Bakken, J.S.; Borody, T.; Brandt, L.J.; Brill, J.V.; Demarco, D.C.; Franzos, M.A.; Kelly, C.; Khoruts, A.; Louie, T.; Martinelli, L.P.; et al. Treating Clostridium difficile infection with fecal microbiota transplantation. Clin. Gastroenterol. Hepatol. 2011, 9, 1044–1049.
-
(2011)
Clin. Gastroenterol. Hepatol.
, vol.9
, pp. 1044-1049
-
-
Bakken, J.S.1
Borody, T.2
Brandt, L.J.3
Brill, J.V.4
Demarco, D.C.5
Franzos, M.A.6
Kelly, C.7
Khoruts, A.8
Louie, T.9
Martinelli, L.P.10
-
37
-
-
84880470281
-
Altered enteric microbiota ecology in interleukin 10-deficient mice during development and progression of intestinal inflammation
-
Maharshak, N.; Packey, C.D.; Ellermann, M.; Manick, S.; Siddle, J.P.; Huh, E.Y.; Plevy, S.; Sartor, R.B.; Carroll, I.M. Altered enteric microbiota ecology in interleukin 10-deficient mice during development and progression of intestinal inflammation. Gut Microbes 2013, 4, 316–324.
-
(2013)
Gut Microbes
, vol.4
, pp. 316-324
-
-
Maharshak, N.1
Packey, C.D.2
Ellermann, M.3
Manick, S.4
Siddle, J.P.5
Huh, E.Y.6
Plevy, S.7
Sartor, R.B.8
Carroll, I.M.9
-
38
-
-
84873513423
-
Host-derived nitrate boosts growth of E. Coli in the inflamed gut
-
Winter, S.E.; Winter, M.G.; Xavier, M.N.; Thiennimitr, P.; Poon, V.; Keestra, A.M.; Laughlin, R.C.; Gomez, G.; Wu, J.; Lawhon, S.D.; et al. Host-derived nitrate boosts growth of E. coli in the inflamed gut. Science 2013, 339, 708–711.
-
(2013)
Science
, vol.339
, pp. 708-711
-
-
Winter, S.E.1
Winter, M.G.2
Xavier, M.N.3
Thiennimitr, P.4
Poon, V.5
Keestra, A.M.6
Laughlin, R.C.7
Gomez, G.8
Wu, J.9
Lawhon, S.D.10
-
39
-
-
84866549438
-
Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment
-
Morgan, X.C.; Tickle, T.L.; Sokol, H.; Gevers, D.; Devaney, K.L.; Ward, D.V.; Reyes, J.A.; Shah, S.A.; LeLeiko, N.; Snapper, S.B.; et al. Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment. Genome Biol. 2012, 13, doi:10.1186/gb-2012-13-9-r79.
-
(2012)
Genome Biol
, vol.13
-
-
Morgan, X.C.1
Tickle, T.L.2
Sokol, H.3
Gevers, D.4
Devaney, K.L.5
Ward, D.V.6
Reyes, J.A.7
Shah, S.A.8
Leleiko, N.9
Snapper, S.B.10
-
40
-
-
84881247044
-
Intestinal microbiota composition of interleukin-10 deficient C57BL/6J mice and susceptibility to Helicobacter hepaticus-induced colitis
-
Yang, I.; Eibach, D.; Kops, F.; Brenneke, B.; Woltemate, S.; Schulze, J.; Bleich, A.; Gruber, A.D.; Muthupalani, S.; Fox, J.G.; Josenhans, C.; et al. Intestinal microbiota composition of interleukin-10 deficient C57BL/6J mice and susceptibility to Helicobacter hepaticus-induced colitis. PLoS One 2013, 8, e70783.
-
(2013)
Plos One
, vol.8
-
-
Yang, I.1
Eibach, D.2
Kops, F.3
Brenneke, B.4
Woltemate, S.5
Schulze, J.6
Bleich, A.7
Gruber, A.D.8
Muthupalani, S.9
Fox, J.G.10
Josenhans, C.11
-
41
-
-
30944466824
-
Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach
-
Manichanh, C.; Rigottier-Gois, L.; Bonnaud, E.; Gloux, K.; Pelletier, E.; Frangeul, L.; Nalin, R.; Jarrin, C.; Chardon, P.; Marteau, P.; et al. Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach. Gut 2006, 55, 205–211.
-
(2006)
Gut
, vol.55
, pp. 205-211
-
-
Manichanh, C.1
Rigottier-Gois, L.2
Bonnaud, E.3
Gloux, K.4
Pelletier, E.5
Frangeul, L.6
Nalin, R.7
Jarrin, C.8
Chardon, P.9
Marteau, P.10
-
42
-
-
84877279792
-
Gut microbial diversity is reduced and is associated with colonic inflammation in a piglet model of short bowel syndrome
-
Lapthorne, S.; Pereira-Fantini, P.M.; Fouhy, F.; Wilson, G.; Thomas, S.L.; Dellios, N.L.; Scurr, M.; O'Sullivan, O.; Ross, R.P.; Stanton, C.; et al. Gut microbial diversity is reduced and is associated with colonic inflammation in a piglet model of short bowel syndrome. Gut Microbes 2013, 4, 212–221.
-
(2013)
Gut Microbes
, vol.4
, pp. 212-221
-
-
Lapthorne, S.1
Pereira-Fantini, P.M.2
Fouhy, F.3
Wilson, G.4
Thomas, S.L.5
Dellios, N.L.6
Scurr, M.7
O'sullivan, O.8
Ross, R.P.9
Stanton, C.10
-
43
-
-
39649100206
-
Active Crohn's disease and ulcerative colitis can be specifically diagnosed and monitored based on the biostructure of the fecal flora
-
Swidsinski, A.; Loening-Baucke, V.; Vaneechoutte, M.; Doerffel, Y. Active Crohn's disease and ulcerative colitis can be specifically diagnosed and monitored based on the biostructure of the fecal flora. Inflamm. Bowel Dis. 2008, 14, 147–161.
-
(2008)
Inflamm. Bowel Dis
, vol.14
, pp. 147-161
-
-
Swidsinski, A.1
Loening-Baucke, V.2
Vaneechoutte, M.3
Doerffel, Y.4
-
44
-
-
84885573828
-
Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens
-
Ng, K.M.; Ferreyra, J.A.; Higginbottom, S.K.; Lynch, J.B.; Kashyap, P.C.; Gopinath, S.; Naidu, N.; Choudhury, B.; Weimer, B.C.; Monack, D.M.; et al. Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens. Nature 2013, 502, 96–99.
-
(2013)
Nature
, vol.502
, pp. 96-99
-
-
Ng, K.M.1
Ferreyra, J.A.2
Higginbottom, S.K.3
Lynch, J.B.4
Kashyap, P.C.5
Gopinath, S.6
Naidu, N.7
Choudhury, B.8
Weimer, B.C.9
Monack, D.M.10
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