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Volumn , Issue , 1995, Pages 38-47

Chaining multiple-alignment fragments in sub-quadratic time

Author keywords

[No Author keywords available]

Indexed keywords

DIRECTED GRAPHS; GRAPH THEORY;

EID: 84967416712     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper
Times cited : (58)

References (14)
  • 1
    • 0019173421 scopus 로고
    • Efficient worst-case data structures for range searching
    • J. Bentley and H. Maurer, Efficient worst-case data structures for range searching, Acta Informatica, 13 (1980), pp. 155-168.
    • (1980) Acta Informatica , vol.13 , pp. 155-168
    • Bentley, J.1    Maurer, H.2
  • 2
    • 85012434974 scopus 로고    scopus 로고
    • Linear-space algorithms that build local alignments from fragments
    • to appear
    • K.-M. Chao and W. Miller, Linear-space algorithms that build local alignments from fragments, to appear in Algorithmica.
    • Algorithmica
    • Chao, K.-M.1    Miller, W.2
  • 3
    • 85039782102 scopus 로고    scopus 로고
    • A local alignment tool for very long DNA sequences
    • to appear
    • K.-M. Chao, J. Zhang, J. Ostell and W. Miller, A local alignment tool for very long DNA sequences, to appear in CABIOS.
    • CABIOS
    • Chao, K.-M.1    Zhang, J.2    Ostell, J.3    Miller, W.4
  • 4
    • 0026888975 scopus 로고
    • Sparse dynamic programming. I: Linear cost functions; II: Convex and concave cost functions
    • D. Eppstein, Z. Galil, Ft. Giancarlo and G. F. Italiano, Sparse dynamic programming. I: linear cost functions; II: convex and concave cost functions, J. Assoc. Comput. Mach., 39 (1992), pp. 519-567.
    • (1992) J. Assoc. Comput. Mach. , vol.39 , pp. 519-567
    • Eppstein, D.1    Galil, Z.2    Giancarlo, R.3    Italiano, G.F.4
  • 5
    • 34250239747 scopus 로고
    • A priority queue in which initialization and queue operations take O(loglogD) time
    • D. B. Johnson, A priority queue in which initialization and queue operations take O(loglogD) time, Math. Syst. Theory, 15 (1982), pp. 295-309.
    • (1982) Math. Syst. Theory , vol.15 , pp. 295-309
    • Johnson, D.B.1
  • 8
    • 0026891611 scopus 로고
    • 2logN) restriction map comparison and search algorithm
    • E. Myers and X. Huang, An 0(N2 logN) restriction map comparison and search algorithm, Bull. Math. Biol., 54 (1992), pp. 599-618.
    • (1992) Bull. Math. Biol. , vol.54 , pp. 599-618
    • Myers, E.1    Huang, X.2
  • 11
    • 0023045778 scopus 로고
    • A multiple alignment program
    • E. Sobel and H. Martinez, A multiple alignment program, Nucl. Acids Res., 14 (1986), pp. 363-374.
    • (1986) Nucl. Acids Res. , vol.14 , pp. 363-374
    • Sobel, E.1    Martinez, H.2
  • 12
    • 0005392023 scopus 로고
    • Ph. D. Thesis, Harvard University, and Aiken Computation Laboratory Report TR-
    • D. E. Willard, Predicate-oriented database search algorithms, Ph. D. Thesis, Harvard University, and Aiken Computation Laboratory Report TR-20-78, 1978.
    • (1978) Predicate-oriented Database Search Algorithms , pp. 20-78
    • Willard, D.E.1
  • 13
    • 0020714456 scopus 로고
    • Rapid similarity searches of nucleic acid and protein data banks
    • W. Wilbur and D. Lipman, Rapid similarity searches of nucleic acid and protein data banks, Proc. Nat. Acad. Sci. USA, 80 (1983), pp. 726-730.
    • (1983) Proc. Nat. Acad. Sci. USA , vol.80 , pp. 726-730
    • Wilbur, W.1    Lipman, D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.