Carbon fixation driven by molecular hydrogen results in chemolithoautotrophically enhanced growth of Helicobacter pylori

Journal of Bacteriology

Volumn 198, Issue 9, 2016, Pages 1423-1428

  Kuhns, Lisa G ^a   Benoit, Stéphane L ^a   Bayyareddy, Krishnareddy ^a,c   Johnson, Darryl ^a,d   Orlando, Ron ^a   Evans, Alexandra L ^b   Waldrop, Grover L ^b   Maier, Robert J ^a  

^a UNIVERSITY OF GEORGIA   (United States)

^b LOUISIANA STATE UNIVERSITY   (United States)

^c Monsanto Hawaii   (United States)

^d CENTERS FOR DISEASE CONTROL AND PREVENTION   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACETYL COENZYME A; CARBOXYLASE; HYDROGEN; HYDROGENASE; MOLECULAR HYDROGEN; UNCLASSIFIED DRUG; ACETYL COENZYME A CARBOXYLASE; AMINO ACID; CARBON; CULTURE MEDIUM; HEME;

ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; CARBON FIXATION; CHEMOAUTOTROPHY; CHEMOLITHOAUTOTROPH; COMPARATIVE STUDY; CONTROLLED STUDY; ENERGY RESOURCE; HELICOBACTER PYLORI; LIQUID CHROMATOGRAPHY; NONHUMAN; PRIORITY JOURNAL; PROTEIN DEGRADATION; PROTEIN EXPRESSION; PROTEOMICS; STOMACH MUCUS; TANDEM MASS SPECTROMETRY; BIOSYNTHESIS; CARBON CYCLE; CHEMISTRY; CULTURE MEDIUM; ENZYMOLOGY; GROWTH, DEVELOPMENT AND AGING; METABOLISM;

ACETYL-COA CARBOXYLASE; AMINO ACIDS; CARBON; CARBON CYCLE; CHEMOAUTOTROPHIC GROWTH; CULTURE MEDIA; HELICOBACTER PYLORI; HEME; HYDROGEN;

EID: 84964997387     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.00041-16     Document Type: Article

References (30)

1. Blaser MJ. 1995. The role of Helicobacter pylori in gastritis and its progression to peptic ulcer disease. Aliment Pharmacol Ther 9(Suppl 1):27-30.
2. Covacci A, Telford JL, Del Giudice G, Parsonnet J, Rappuoli R. 1999. Helicobacter pylori virulence and genetic geography. Science 284:1328-1333. http://dx.doi.org/10.1126/science.284.5418.1328.
3. Sipponen P, Hyvarinen H, Seppala K, Blaser MJ. 1998. Review article:pathogenesis of the transformation from gastritis to malignancy. Aliment Pharmacol Ther 12(Suppl 1):61-71. http://dx.doi.org/10.1111/j.1365-2036.1998.00005.x.
4. Dunne C, Dolan B, Clyne M. 2014. Factors that mediate colonization of the human stomach by Helicobacter pylori. World J Gastroenterol 20:5610-5624. http://dx.doi.org/10.3748/wjg.v20.i19.5610.
5. Schreiber S, Konradt M, Groll C, Scheid P, Hanauer G, Werling HO, Josenhans C, Suerbaum S. 2004. The spatial orientation of Helicobacter pylori in the gastric mucus. Proc Natl Acad Sci U S A 101:5024-5029. http://dx.doi.org/10.1073/pnas.0308386101.
6. Ouwerkerk JP, de Vos WM, Belzer C. 2013. Glycobiome: bacteria and mucus at the epithelial interface. Best Pract Res Clin Gastroenterol 27:25-38. http://dx.doi.org/10.1016/j.bpg.2013.03.001.
7. Tomb JF, White O, Kerlavage AR, Clayton RA, Sutton GG, Fleischmann RD, Ketchum KA, Klenk HP, Gill S, Dougherty BA, Nelson K, Quackenbush J, Zhou L, Kirkness EF, Peterson S, Loftus B, Richardson D, Dodson R, Khalak HG, Glodek A, McKenney K, Fitzegerald LM, Lee N, Adams MD, Hickey EK, Berg DE, Gocayne JD, Utterback TR, Peterson JD, Kelley JM, Cotton MD, Weidman JM, Fujii C, Bowman C, Watthey L, Wallin E, Hayes WS, Borodovsky M, Karp PD, Smith HO, Fraser CM, Venter JC. 1997. The complete genome sequence of the gastric pathogen Helicobacter pylori. Nature 388:539-547. http://dx.doi.org/10.1038/41483.
8. Doig P, de Jonge BL, Alm RA, Brown ED, Uria-Nickelsen M, Noonan B, Mills SD, Tummino P, Carmel G, Guild BC, Moir DT, Vovis GF, Trust TJ. 1999. Helicobacter pylori physiology predicted from genomic comparison of two strains. Microbiol Mol Biol Rev 63:675-707.
9. Walker MM, Talley NJ. 2014. Review article: bacteria and pathogenesis of disease in the upper gastrointestinal tract-beyond the era of Helicobacter pylori. Aliment Pharmacol Ther 39:767-779. http://dx.doi.org/10.1111/apt.12666.
10. Mendz GL, Hazell SL, Burns BP. 1993. Glucose utilization and lactate production by Helicobacter pylori. J Gen Microbiol 139:3023-3028. http://dx.doi.org/10.1099/00221287-139-12-3023.
11. Mendz GL, Hazell SL, van Gorkom L. 1994. Pyruvate metabolism in Helicobacter pylori. Arch Microbiol 162:187-192. http://dx.doi.org/10.1007/BF00314473.
12. Stark RM, Suleiman MS, Hassan IJ, Greenman J, Millar MR. 1997. Amino acid utilisation and deamination of glutamine and asparagine by Helicobacter pylori. J Med Microbiol 46:793-800. http://dx.doi.org/10.1099/00222615-46-9-793.
13. Weinberg MV, Maier RJ. 2007. Peptide transport in Helicobacter pylori:roles of dpp and opp systems and evidence for additional peptide transporters. J Bacteriol 189:3392-3402. http://dx.doi.org/10.1128/JB.01636-06.
14. Olson JW, Maier RJ. 2002. Molecular hydrogen as an energy source for Helicobacter pylori. Science 298:1788-1790. http://dx.doi.org/10.1126/science.1077123.
15. Maier RJ, Fu C, Gilbert J, Moshiri F, Olson J, Plaut AG. 1996. Hydrogen uptake hydrogenase in Helicobacter pylori. FEMS Microbiol Lett 141:71-76. http://dx.doi.org/10.1111/j.1574-6968.1996.tb08365.x.
16. Mehta NS, Benoit S, Mysore JV, Sousa RS, Maier RJ. 2005. Helicobacter hepaticus hydrogenase mutants are deficient in hydrogen-supported amino acid uptake and in causing liver lesions in A/J mice. Infect Immun 73:5311-5318. http://dx.doi.org/10.1128/IAI.73.9.5311-5318.2005.
17. Bury-Moné S, Kaakoush NO, Asencio C, Megraud F, Thibonnier M, De Reuse H, Mendz GL. 2006. Is Helicobacter pylori a true microaerophile? Helicobacter 11:296-303. http://dx.doi.org/10.1111/j.1523-5378.2006.00413.x.
18. Xia HX, Keane CT, O'Morain CA. 1994. Culture of Helicobacter pylori under aerobic conditions on solid media. Eur J Clin Microbiol Infect Dis 13:406-409. http://dx.doi.org/10.1007/BF01971998.
19. Park SA, Ko A, Lee NG. 2011. Stimulation of growth of the human gastric pathogen Helicobacter pylori by atmospheric level of oxygen under high carbon dioxide tension. BMC Microbiol 11:96. http://dx.doi.org/10.1186/1471-2180-11-96.
20. Kelly DJ, Hughes NJ, Poole RK. 2001. Microaerobic physiology: aerobic respiration, anaerobic respiration, and carbon dioxide metabolism, p 113-124. In Mobley HLT, Mendz GL, Hazell SL (ed), Helicobacter pylori:physiology and genetics. American Society for Microbiology, Washington, DC.
21. Mendz GL, Jimenez BM, Hazell SL, Gero AM, O'Sullivan WJ. 1994. De novo synthesis of pyrimidine nucleotides by Helicobacter pylori. J Appl Bacteriol 77:1-8. http://dx.doi.org/10.1111/j.1365-2672.1994.tb03036.x.
22. Lee A, O'Rourke J, De Ungria MC, Robertson B, Daskalopoulos G, Dixon MF. 1997. A standardized mouse model of Helicobacter pylori infection: introducing the Sydney strain. Gastroenterology 112:1386-1397. http://dx.doi.org/10.1016/S0016-5085(97)70155-0.
23. Benoit SL, Maier RJ. 2014. Twin-arginine translocation system in Helicobacter pylori: TatC, but not TatB, is essential for viability. mBio 5:e01016-01013. http://dx.doi.org/10.1128/mBio.01016-13.
24. Lamichhane-Khadka R, Benoit SL, Maier SE, Maier RJ. 2013. A link between gut community metabolism and pathogenesis: molecular hydrogen-stimulated glucarate catabolism aids Salmonella virulence. Open Biol 3:130146. http://dx.doi.org/10.1098/rsob.130146.
25. Alamuri P, Maier RJ. 2006. Methionine sulfoxide reductase in Helicobacter pylori: interaction with methionine-rich proteins and stress-induced expression. J Bacteriol 188:5839-5850. http://dx.doi.org/10.1128/JB.00430-06.
26. Maier RJ. 1981. Rhizobium japonicum mutant strains unable to grow chemoautotrophically with H2. J Bacteriol 145:533-540.
27. Blanchard CZ, Lee YM, Frantom PA, Waldrop GL. 1999. Mutations at four active site residues of biotin carboxylase abolish substrate-induced synergism by biotin. Biochemistry 38:3393-3400. http://dx.doi.org/10.1021/bi982660a.
28. Lepo JE, Hanus FJ, Evans HJ. 1980. Chemoautotrophic growth of hydrogen-uptake-positive strains of Rhizobium japonicum. J Bacteriol 141:664-670.
29. Fuchs G. 2011. Alternative pathways of carbon dioxide fixation: insights into the early evolution of life? Annu Rev Microbiol 65:631-658. http://dx.doi.org/10.1146/annurev-micro-090110-102801.
30. Kuenen G. 1999. Oxidation of inorganic compounds by chemolithotrophs, p 234-260. In Lengeler J, Drews G, Schlegel H (ed), Biology of the prokaryotes. Georg Thieme, Stuttgart, Germany.