Bayesian Spatiotemporal Pattern and Eco-climatological Drivers of Striped Skunk Rabies in the North Central Plains

PLoS Neglected Tropical Diseases

Volumn 10, Issue 4, 2016, Pages

  Raghavan, Ram K ^a   Hanlon, Cathleen A ^b   Goodin, Douglas G ^a   Davis, Rolan ^a   Moore, Michael ^a   Moore, Susan ^a   Anderson, Gary A ^a  

^a KANSAS STATE UNIVERSITY   (United States)

^b CENTERS FOR DISEASE CONTROL AND PREVENTION   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL MODEL; ARTICLE; CLIMATE CHANGE; MATHEMATICAL MODEL; NONHUMAN; NORTH AMERICA; RABIES; RETROSPECTIVE STUDY; SKUNK; UNITED STATES; ANIMAL; BAYES THEOREM; CLIMATE; ISOLATION AND PURIFICATION; RABIES VIRUS; SPATIOTEMPORAL ANALYSIS; TOPOGRAPHY; VETERINARY;

ANIMALS; BAYES THEOREM; CLIMATE; MEPHITIDAE; NORTH AMERICA; RABIES; RABIES VIRUS; SPATIO-TEMPORAL ANALYSIS; TOPOGRAPHY, MEDICAL;

EID: 84964872109     PISSN: 19352727     EISSN: 19352735     Source Type: Journal    
DOI: 10.1371/journal.pntd.0004632     Document Type: Article

References (56)

1. CDC Rabies Website. Available: http://www.cdc.gov/rabies/location/usa/index.html.
2. Davis R, Nadin-Davis SA, Moore M, Hanlon CA, Genetic characterization and phylogenetic analysis of skunk-associated rabies viruses in North America with special emphasis on the Central Plains. Virus research2013;174: 27–36.2. doi: 10.1016/j.virusres.2013.02.00823524137
3. Kuzmina NA, Lemey P, Kuzmin IV, Mayes BC, Ellison JA, et al. The phylogeography and spatiotemporal spread of south-central skunk rabies virus. PLoS ONE8(12): e82348. doi: 10.1371/journal.pone.008234824312657
4. Burt WH, (1980) A field guide to the mammals: North America north of Mexico. Vol. 5. Houghton Mifflin Harcourt.
5. Charlton KM, Webster WA, Casey GA, Rupprecht CE, (1988). Skunk rabies. Review of Infectious diseases10: S626–S628.
6. Rupprecht CE, Smith JS, Fekadu M, Childs JE, The ascension of wildlife rabies: a cause for public health concern or intervention. Emerg Infect Dis1995;1: 107–14. 8903179
7. Talbot B, Garant D, Rioux Paquette S, Mainguy J, Pelletier F, Lack of Genetic Structure and Female-Specific Effect of Dispersal Barriers in a Rabies Vector, the Striped Skunk (Mephitis mephitis). PLoS ONE7(11): e49736. doi: 10.1371/journal.pone.004973623166760
8. Slate D, Algeo TP, Nelson KM, Chipman RB, Donovan D, Blanton JD, et al. (2009) Oral Rabies Vaccination in North America: Opportunities, Complexities, and Challenges. PLoS Negl Trop Dis3(12): e549. doi: 10.1371/journal.pntd.000054920027214
9. Brown LJ, Rosatte RC, Fehlner-Gardiner C, Bachmann P, Ellison JA, Jackson FR, et al. Oral vaccination and protection of red foxes (Vulpes vulpes) against rabies using ONRAB, an adenovirus-rabies recombinant vaccine. Vaccine. 2014Feb12;32(8):984–9. doi: 10.1016/j.vaccine.2013.12.01524374501
10. Brown LJ, Rosatte RC Fehlner-Gardiner C, Ellison JA, Jackson FR, Bachmann P, et al. Oral vaccination and protection of striped skunks (Mephitis mephitis) against rabies using ONRAB. Vaccine. 2014Jun17;32(29):3675–9. Epub 2014 May 6. doi: 10.1016/j.vaccine.2014.04.02924814554
11. Tolson ND, Charlton KM, Stewart RB, Campbell JB, Wiktor TJ, (1987) Immune response in skunks to a vaccinia virus recombinant expressing the rabies virus glycoprotein. Can. J. Vet. Res. 51:363–366. 3651890
12. 2010 Census urban and rural classification and urban area criteria. Available: https://www.census.gov/geo/reference/ua/urban-rural-2010.html.
13. Houseknecht CR, Tester JR, (1978) Denning habits of striped skunks (Mephitis mephitis). American Midland Naturalist100: 424–430.
14. Wade-Smith J, Verts B, (1982) Mephitis mephitis. Mammalian Species, 173:1–7.
15. Whitaker J, (1996) National Audubon Society Field Guide To North American Mammals, Revised Edition. New York, NY. Knopf, Inc.
16. Fry J, Xian G, Jin S, Dewitz J, Homer C, et al. (2011) Completion of the 2006 National Land Cover Database for the Conterminous United States. PE&RS77:858–864.
17. McGarigal, K., SA Cushman, and E Ene. 2012. FRAGSTATS v4: Spatial Pattern Analysis Program for Categorical and Continuous Maps. Computer software program produced by the authors at the University of Massachusetts, Amherst. Available: http://www.umass.edu/landeco/research/fragstats/fragstats.html.
18. Land Processes Distributed Active Archive Center. MODIS Overview. Available: https://lpdaac.usgs.gov/products/modis_products_table/modis_overview.
19. White J, Hoogenboom G, Stackhouse P, Hoell J, (2008) Evaluation of NASA satellite and assimilation model-derived long-term daily temperature data over the continental US. Agr Forest Meteorol148: 1574–1584.
20. White J, Hoogenboom G, Wilkens P, Stackhouse P, Hoell J, 2011: Evaluation of Satellite-Based, Modeled-Derived Daily Solar Radiation Data for the Continental United States. Agron J103: 1242–1251.
21. Hosmer DW, Lemeshow S, Model-Building Strategies and Methods for Logistic Regression. Applied Logistic Regression1990:91–142.
22. Allison PD, Logistic regression using SAS: Theory and application. 2012. SAS Institute.
23. Besag J, York JC, Mollié A, (1991) Bayesian image restoration, with two applications in spatial statistics. Ann. Inst. Statist. Math. 43:1–109.
24. Best N, Richardson S, Thomson A, (2005) A comparison of Bayesian spatial models for disease mapping. Stat Methods Med Res. 2005 Feb;14(1):35–59.
25. R-INLA Random Walk Model of Order 1 Website. Available: http://www.math.ntnu.no/inla/r-inla.org/doc/latent/rw1.pdf.
26. Schrödle D, Held L, (2011) Spatio-temporal disease mapping using INLA. Environmentrics, 22: 725–734.
27. Lawson AB, (2013) Bayesian disease mapping. Hierarchical modeling in spatial epidemiology. Second Edition. CRC PressNew York.
28. R-INLA Project Website. Available: http://www.r-inla.org/.
29. Beocat Documentation Website. Available: http://www.cis.ksu.edu/beocat/documentation.
30. Gelman A, Carlin JB, Stern HS, Rubin DB, (2004) Posterior simulation: In: Bayesian Data Analysis. Boca Raton, FL: Chapmann and Hall/CRC. pp 283–310.
31. Bernardinelli L, Clayton D, Pascutto C, Montomoli C, Ghislandi M, et al. Bayesian analysis of space-time variation in disease risk. Stat Med. 1995Nov15–30;14(21–22):2433–43. 8711279
32. Elliott P, Wakefield JC, Best N, Briggs DJ, (2000). Spatial epidemiology: methods and applications. Oxford University Press, Oxford, UK.
33. Osnas EE, Heisey DM, Rolley RE, Samuel MD, Spatial and temporal patterns of chronic wasting disease: fine-scale mapping of a wildlife epidemic in Wisconsin. Ecol Appl. 2009Jul;19(5):1311–22. 19688937
34. Mörner T, Obendorf DL, Artois M, Woodford MH, Surveillance and monitoring of wildlife diseases. Rev Sci Tech. 2002Apr;21(1):67–76. 11974631
35. Stallknecht DE, (2007) Impediments to wildlife disease surveillance, research, and diagnostics. In: Wildlife and Emerging Zoonotic Diseases: The Biology, Circumstances and Consequences of Cross-Species Transmission, pp. 445–461. Springer BerlinHeidelberg.
36. Gelman A, Carlin B, Stern HS, Rubin DB, (2004) Bayesian data analysis. Second Edition. Chapman and Hall, New York, New York, USA.
37. National Land Cover Database 2006. Product Legend. Available: http://www.mrlc.gov/nlcd06_leg.php.
38. Kretser HE, Sullivan PJ, Knuth BA, (2008) Housing density as an indicator of spatial patterns of reported human–wildlife interactions in Northern New York. Landscape Urban Plan84:282–292.
39. Hansen AJ, Knight RL, Marzluff JM, Powell S, Brown K, et al. (2005) Effects of exurban development on biodiversity: patterns, mechanisms, and research needs. Ecological Appl15:1893–1905.
40. Saunders SC, Mislivets MR, Chen JQ, Cleland DT, (2002) Effects of roads on landscape structure within nested ecological units of the Northern Great Lakes Region, USA. Biol Conserv103:209–225.
41. Laurance WF, Lovejoy TE, Vasconcelos HL, Bruna EM, Didham RK, et al. (2002) Ecosystem decay of Amazonian forest fragments: a 22-year investigation. Conserv Biol16: 605–618.
42. Keesing F, Belden LK, Daszak P, Dobson A, Harvell CD, et al. (2010) Impacts of biodiversity on the emergence and transmission of infectious diseases. Nature468: 647–652. doi: 10.1038/nature0957521124449
43. Shirer HW, Fitch HS, (1970) Comparison from radiotracking of movements and denning habits of the raccoon, striped skunk, and opossum in northeastern Kansas. J Mammal: 491–503.
44. Dijak WD, Thompson FR, III (2000) Landscape and edge effects on the distribution of mammalian predators in Missouri. J Wildlife Manag64:209–216.
45. Neiswenter SA, Dowler RC, (2007) Habitat use of western spotted skunks and striped skunks in Texas. J Wildlife Manag71:583–586.
46. Crooks KR, (2002) Relative sensitivities of mammalian carnivores to habitat fragmentation. Conserv Biol16:488–502.
47. Ordeñana MA, Crooks KR, Boydston EE, Fisher RN, Lyren LM, et al. (2010) Effects of urbanization on carnivore species distribution and richness. J Mammal91:1322–1331.
48. Larivière S, Messier F, (2000) Habitat selection and use of edges by striped skunks in the Canadian prairies. Canadian J Zool78:366–372.
49. Rioux Paquette S, Talbot B, Garant D, Mainguy J, Pelletier F, (2014) Modelling the dispersal of the two main hosts of the raccoon rabies variant in heterogeneous environments with landscape genetics. Evolutionary Applications, 7: 734–749. doi: 10.1111/eva.1216125469156
50. Githeko AK, Lindsay SW, Confalonieri UE, Patz JA, (2000) Climate change and vector-borne diseases: a regional analysis. Bulletin of the World Health Organization78:1136–1147. 11019462
51. Karl TR, Jones PD, Knight RW, Kukla G, Plummer N, et al. (1993) A new perspective on recent global warming—asymmetric trends of daily maximum and minimum temperature. Bull Amer Meteor Soc74:1007–1023. doi: 10.1175/1520-0477(1993)074<1007:ANPORG>2.0.CO;2
52. Braganza K, Karoly DJ, Arblaster JM, (2004) Diurnal temperature range as an index of global climate change during the twentieth century. Geophys Res Lett31: L13217
53. Easterling DR, Horton B, Jones PD, Peterson TC, Karl TR, Parker DE, et al. (1997). Maximum and minimum temperature trends for the globe. Science, 277: 364–367.
54. Karl TR, Kukla G, Razuvayev VN, Changery MJ, Quayle RG, et al. (1991) Global warming—evidence for asymmetric diurnal temperature-change. Geophys Res Lett18:2253–2256.
55. Bowe S, (2009) The influence of host ecology and land cover change on rabies virus epidemiology in the Flint Hills. Doctoral dissertation, Kansas State University.
56. Patz JA, Githeko AK, McCarty JP, Hussain S, Confalonieri U, McMichael AJ, Campbell-Lendrum DH, Corvalan CF, Ebi KL, Githeko A, Scheraga JD, Woodward A, et al. (2003). Climate change and infectious diseases. In: Climate change and human health. Eds: 103–132. World Health Organization, 2003. Geneva, Switzerland.