Characterization of novel Bovine Leukemia Virus (BLV) antisense transcripts by deep sequencing reveals constitutive expression in tumors and transcriptional interaction with viral microRNAs

Retrovirology

Volumn 13, Issue 1, 2016, Pages

  Durkin, Keith ^a   Rosewick, Nicolas ^a,b   Artesi, Maria ^a   Hahaut, Vincent ^a   Griebel, Philip ^c,d   Arsic, Natasa ^c   Burny, Arsène ^b   Georges, Michel ^a   Van den Broeke, Anne ^a,b  

^a UNIVERSITY OF LIÈGE   (Belgium)

^b JULES BORDET INSTITUTE   (Belgium)

^c UNIVERSITY OF SASKATCHEWAN   (Canada)

^d UNIVERSITY OF SASKATCHEWAN   (Canada)

Author keywords

Bovine leukemia virus; Deltaretrovirus; High throughput sequencing; Leukemogenesis; Noncoding RNA; Oxford Nanopore minION; RNA seq

Indexed keywords

DNA DIRECTED RNA POLYMERASE III; MICRORNA; RNA INDUCED SILENCING COMPLEX; RNA LIGASE; UNCLASSIFIED DRUG; VIRAL MICRORNA; BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR; COMPLEMENTARY RNA; HBZ PROTEIN, HUMAN T-CELL LEUKEMIA VIRUS TYPE I; VIRAL PROTEIN; VIRUS RNA;

3' LONG TERMINAL REPEAT; 3' RAPID AMPLIFICATION OF CDNA END; 5' LONG TERMINAL REPEAT; 5' RAPID AMPLIFICATION OF CDNA END; ANTISENSE TRANSCRIPT; ARTICLE; BOVINE LEUKEMIA VIRUS; CELLULAR DISTRIBUTION; CODING POTENTIAL; CONTROLLED STUDY; DEEP SEQUENCING; DNA STRUCTURE; GENE DELETION; GENE INTERACTION; GENE SEQUENCE; GENE SILENCING; GENERAL ASPECTS OF DISEASE; GENETIC PARAMETERS; GENETIC TRANSFECTION; HELA CELL LINE; HIGH THROUGHPUT SEQUENCING; LONG TERMINAL REPEAT; MOLECULAR CLONING; MOLECULAR GENETICS; MUTATIONAL ANALYSIS; NONHUMAN; OPEN READING FRAME; POLYADENYLATION; PROTEIN CLEAVAGE; RNA SEQUENCE; RNA SPLICING; STRUCTURE ACTIVITY RELATION; TRANSCRIPTION REGULATION; TRANSCRIPTIONAL INTERACTION; TRANSCRIPTIONAL INTERFERENCE; TUMORIGENIC POTENTIAL; VIRUS GENOME; VIRUS LOAD; ANIMAL; B CELL LEUKEMIA; B CELL LYMPHOMA; BOVINE; ENZOOTIC BOVINE LEUKOSIS; GENETIC TRANSCRIPTION; GENETICS; HUMAN; METABOLISM; SHEEP; VIROLOGY;

ANIMALS; BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTORS; CATTLE; ENZOOTIC BOVINE LEUKOSIS; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; LEUKEMIA VIRUS, BOVINE; LEUKEMIA, B-CELL; LYMPHOMA, B-CELL; MICRORNAS; RETROVIRIDAE PROTEINS; RNA, ANTISENSE; RNA, VIRAL; SHEEP; TERMINAL REPEAT SEQUENCES; TRANSCRIPTION, GENETIC;

EID: 84964734946     PISSN: None     EISSN: 17424690     Source Type: Journal    
DOI: 10.1186/s12977-016-0267-8     Document Type: Article

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