FALCON@home: A high-throughput protein structure prediction server based on remote homologue recognition

Bioinformatics

Volumn 32, Issue 3, 2016, Pages 462-464

  Wang, Chao ^a,b   Zhang, Haicang ^a,b   Zheng, Wei Mou ^c   Xu, Dong ^d   Zhu, Jianwei ^a   Wang, Bing ^a   Ning, Kang ^e   Sun, Shiwei ^a   Li, Shuai Cheng ^f   Bu, Dongbo ^a  

^a INSTITUTE OF COMPUTING TECHNOLOGY   (China)

^b INSTITUTE OF GEOLOGY AND GEOPHYSICS   (China)

^c INSTITUTE OF THEORETICAL PHYSICS   (China)

^d UNIVERSITY OF MISSOURI   (United States)

^e HUAZHONG UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

^f CITY UNIVERSITY OF HONG KONG   (Hong Kong)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN;

ALGORITHM; ANIMAL; BIOLOGY; CHEMISTRY; HIGH THROUGHPUT SCREENING; MOUSE; PROCEDURES; PROTEIN CONFORMATION; PROTEIN DATABASE; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; SOFTWARE;

ALGORITHMS; ANIMALS; COMPUTATIONAL BIOLOGY; DATABASES, PROTEIN; HIGH-THROUGHPUT SCREENING ASSAYS; MICE; PROTEIN CONFORMATION; PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, PROTEIN; SOFTWARE;

EID: 84962302439     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btv581     Document Type: Article

References (7)

1. Li S.C, et al. (2008). Fragment-hmm: a new approach to protein structure prediction. Protein Sci. 17, 1925-1934.
2. Liu B, et al. (2014). Combining evolutionary information extracted from frequency profiles with sequence-based kernels for protein remote homology detection. Bioinformatics. 30, 472-479.
3. Peng J, and Xu J. (2011). Raptorx: exploiting structure information for protein alignment by statistical inference. Proteins Struct. Funct. Bioinf. 79, 161-171.
4. Xu J, et al. (2003). Raptor: optimal protein threading by linear programming. J. Bioinf. Comput. Biol. 1, 95-117.
5. Yang J, et al. (2015). The i-Tasser suite: protein structure and function prediction. Nat. Methods. 12, 7-8.
6. Zhang H, et al. (2015). Improving protein threading accuracy via combining local and global potential using treecrf model. arXiv preprint arXiv:1509.03434.
7. Zhu J, et al. (2015). Topo: Improving remote homologue recognition via identifying common protein structure framework. arXiv preprint arXiv:1507.03197.