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Volumn , Issue , 2003, Pages 353-362

A new approach for gene annotation using unambiguous sequence joining

Author keywords

BLAST; dynamic programming; RefSeq; Spliced alignments

Indexed keywords

ALIGNMENT; BIOINFORMATICS; BLASTING; DNA SEQUENCES; DYNAMIC PROGRAMMING; NUCLEIC ACIDS; TESTBEDS;

EID: 84960382809     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/CSB.2003.1227336     Document Type: Conference Paper
Times cited : (5)

References (18)
  • 1
    • 0033119399 scopus 로고    scopus 로고
    • Errors in genome annotation
    • Apr
    • S. E. Brenner. Errors in genome annotation. Trends in Genetics, 15(4):132-133, Apr. 1999.
    • (1999) Trends in Genetics , vol.15 , Issue.4 , pp. 132-133
    • Brenner, S.E.1
  • 2
    • 0032247416 scopus 로고    scopus 로고
    • Evolutionary fates and origins of U12-type introns
    • C. B. Burge, R. A. Padgett, and P. A. Sharp. Evolutionary fates and origins of U12-type introns. Molecular Cell, 2:773-785, 1998.
    • (1998) Molecular Cell , vol.2 , pp. 773-785
    • Burge, C.B.1    Padgett, R.A.2    Sharp, P.A.3
  • 3
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • Feb
    • I. H. G. S. Consortium. Initial sequencing and analysis of the human genome. Nature, 409:860-921, Feb. 2001.
    • (2001) Nature , vol.409 , pp. 860-921
  • 6
    • 0037047644 scopus 로고    scopus 로고
    • Predictive identification of exonic splicing enchancers in human genes
    • W. G. Fairbrother, R.-F. Yeh, P. A. Sharp, and C. B. Burge. Predictive identification of exonic splicing enchancers in human genes. Science, 297:1007-1013, 2002.
    • (2002) Science , vol.297 , pp. 1007-1013
    • Fairbrother, W.G.1    Yeh, R.-F.2    Sharp, P.A.3    Burge, C.B.4
  • 7
    • 0031732094 scopus 로고    scopus 로고
    • A computer program for aligning a cDNA equence with a genomic DNA sequence
    • L. Florea, G. Hartzell, Z. Zhang, G. M. Rubin, and W. Miller. A computer program for aligning a cDNA equence with a genomic DNA sequence. Genome Research, 8:967-974, 1998.
    • (1998) Genome Research , vol.8 , pp. 967-974
    • Florea, L.1    Hartzell, G.2    Zhang, Z.3    Rubin, G.M.4    Miller, W.5
  • 9
    • 0016518550 scopus 로고
    • A linear-space algorithm for computing maximal common subsequences
    • Jun
    • D. S. Hirschberg. A linear-space algorithm for computing maximal common subsequences. Communications of the ACM, 18:341-343, Jun. 1975.
    • (1975) Communications of the ACM , vol.18 , pp. 341-343
    • Hirschberg, D.S.1
  • 10
    • 0036796369 scopus 로고    scopus 로고
    • Current methods of gene prediction, their strengths and weaknesses
    • C. Mathé, M.-F. Sagot, T. Schiex, and P. Rouzé. Current methods of gene prediction, their strengths and weaknesses. Nucleic Acids research, 30:4103-4117, 2002.
    • (2002) Nucleic Acids Research , vol.30 , pp. 4103-4117
    • Mathé, C.1    Sagot, M.-F.2    Schiex, T.3    Rouzé, P.4
  • 11
    • 0035011227 scopus 로고    scopus 로고
    • Comparison of genomic DNA sequences: Solved and unsolved problems
    • W. Miller. Comparison of genomic DNA sequences: solved and unsolved problems. Bioinformatics, 17(5):391-397, 2001.
    • (2001) Bioinformatics , vol.17 , Issue.5 , pp. 391-397
    • Miller, W.1
  • 12
    • 0030870076 scopus 로고    scopus 로고
    • EST GENOME: A program to align spliced DNA sequences to unspliced genomic DNA
    • R. Mott. EST GENOME: a program to align spliced DNA sequences to unspliced genomic DNA. CABIOS, 13(7):477-478, 1997.
    • (1997) CABIOS , vol.13 , Issue.7 , pp. 477-478
    • Mott, R.1
  • 14
  • 16
    • 0034129194 scopus 로고    scopus 로고
    • Optimal spliced alignment of homologous cDNA to a genomic DNA template
    • J. Usuka, W. Zhu, and V. Brendel. Optimal spliced alignment of homologous cDNA to a genomic DNA template. Bioinformatics, 16:203-211, 2000.
    • (2000) Bioinformatics , vol.16 , pp. 203-211
    • Usuka, J.1    Zhu, W.2    Brendel, V.3
  • 17
    • 0035189310 scopus 로고    scopus 로고
    • Spidey: A tool for mRNA-to-genomic alignment
    • S. J. Wheelan, D. M. Church, and J. M. Ostell. Spidey: A tool for mRNA-to-genomic alignment. Genome Research, 11:1952-1957, 2001.
    • (2001) Genome Research , vol.11 , pp. 1952-1957
    • Wheelan, S.J.1    Church, D.M.2    Ostell, J.M.3
  • 18
    • 0035002015 scopus 로고    scopus 로고
    • Computational inference of homologous gene structures in the human genome
    • R.-F. Yeh, L. P. Lim, and C. B. Burge. Computational inference of homologous gene structures in the human genome. Genome Research, 11:803-816, 2001.
    • (2001) Genome Research , vol.11 , pp. 803-816
    • Yeh, R.-F.1    Lim, L.P.2    Burge, C.B.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.