Realtime analysis and visualization of MinION sequencing data with npReader

Bioinformatics

Volumn 32, Issue 5, 2016, Pages 764-766

  Cao, Minh Duc ^a   Ganesamoorthy, Devika ^a   Cooper, Matthew A ^a   Coin, Lachlan J M ^a,b  

^a UNIVERSITY OF QUEENSLAND   (Australia)

^b IMPERIAL COLLEGE LONDON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; BIOLOGY; DNA SEQUENCE; NANOPORE; SOFTWARE;

ALGORITHMS; COMPUTATIONAL BIOLOGY; NANOPORES; SEQUENCE ANALYSIS, DNA; SOFTWARE;

EID: 84960112669     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btv658     Document Type: Article

References (3)

1. Cao M.D, et al. (2015). Real-Time strain typing and analysis of antibiotic resistance potential using Nanopore MinION sequencing. bioRxiv. doi: 10.1101/.019356.
2. Loman N.J, and Quinlan A.R. (2014). Poretools: a toolkit for analyzing nanopore sequence data. Bioinformatics. 30, 3399-3401.
3. Watson M, et al. (2015). poRe: an R package for the visualization and analysis of nanopore sequencing data. Bioinformatics. 31, 114-115.