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Volumn 2016, Issue 108, 2016, Pages

Fluorescence time-lapse imaging of the complete S. venezuelae life cycle using a microfluidic device

Author keywords

Development; DivIVA; Fiji software; FtsZ; Immunology; Issue 108; Microfluidic device; Polar growth; Sporulation; Streptomyces venezuelae; Time lapse microscopy

Indexed keywords

FLUORESCENCE; FLUORESCENCE MICROSCOPY; GROWTH, DEVELOPMENT AND AGING; LAB ON A CHIP; PROCEDURES; SOFTWARE; STREPTOMYCES COELICOLOR; TIME LAPSE IMAGING;

EID: 84959440113     PISSN: 1940087X     EISSN: None     Source Type: Journal    
DOI: 10.3791/53863     Document Type: Article
Times cited : (39)

References (31)
  • 1
    • 84947486837 scopus 로고    scopus 로고
    • C-di-GMP signalling and the regulation of developmental transitions in streptomycetes
    • Bush, M. J., Tschowri, N., Schlimpert, S., Flärdh, K., & Buttner, M. J. C-di-GMP signalling and the regulation of developmental transitions in streptomycetes. Nat. Rev. Microbiol. 13, 749-60 (2015).
    • (2015) Nat. Rev. Microbiol , vol.13 , pp. 749-760
    • Bush, M.J.1    Tschowri, N.2    Schlimpert, S.3    Flärdh, K.4    Buttner, M.J.5
  • 2
    • 84864109890 scopus 로고    scopus 로고
    • Cell division and DNA segregation in Streptomyces.: How to build a septum in the middle of nowhere?
    • Jakimowicz, D., & van Wezel, G. P. Cell division and DNA segregation in Streptomyces.: how to build a septum in the middle of nowhere? Mol. Microbiol. 85, 393-404 (2012).
    • (2012) Mol. Microbiol , vol.85 , pp. 393-404
    • Jakimowicz, D.1    Van Wezel, G.P.2
  • 3
    • 83355162664 scopus 로고    scopus 로고
    • Signals and regulators that govern Streptomyces.Development
    • McCormick, J. R., & Flärdh, K. Signals and regulators that govern Streptomyces.development. FEMS Microbiol. Rev. 36, 206-231 (2012).
    • (2012) FEMS Microbiol. Rev , vol.36 , pp. 206-231
    • McCormick, J.R.1    Flärdh, K.2
  • 5
    • 84865562049 scopus 로고    scopus 로고
    • The Ser/Thr protein kinase AfsK regulates polar growth and hyphal branching in the filamentous bacteria Streptomyces
    • Hempel, A. M. et al. The Ser/Thr protein kinase AfsK regulates polar growth and hyphal branching in the filamentous bacteria Streptomyces. Proc. Natl. Acad. Sci. U S A. 109, E2371-2379 (2012).
    • (2012) Proc. Natl. Acad. Sci. U S A , vol.109 , pp. E2371-E2379
    • Hempel, A.M.1
  • 6
    • 84878137161 scopus 로고    scopus 로고
    • Dynamic gradients of an intermediate filament-like cytoskeleton are recruited by a polarity landmark during apical growth
    • Fuchino, K. et al. Dynamic gradients of an intermediate filament-like cytoskeleton are recruited by a polarity landmark during apical growth. Proc. Natl. Acad. Sci. U S A. 110, E1889-1897 (2013).
    • (2013) Proc. Natl. Acad. Sci. U S A , vol.110 , pp. E1889-E1897
    • Fuchino, K.1
  • 7
    • 84873157559 scopus 로고    scopus 로고
    • Coiled-coil protein Scy is a key component of a multiprotein assembly controlling polarized growth in Streptomyces
    • Holmes, N. A. et al. Coiled-coil protein Scy is a key component of a multiprotein assembly controlling polarized growth in Streptomyces. Proc. Natl. Acad. Sci. U S A. 110, E397-406 (2013).
    • (2013) Proc. Natl. Acad. Sci. U S A , vol.110 , pp. E397-E406
    • Holmes, N.A.1
  • 8
    • 0027996226 scopus 로고
    • Growth and viability of Streptomyces coelicolor. Mutant for the cell division gene ftsZ
    • McCormick, J. R., Su, E. P., Driks, A., & Losick, R. Growth and viability of Streptomyces coelicolor. mutant for the cell division gene ftsZ. Mol. Microbiol. 14, 243-254 (1994).
    • (1994) Mol. Microbiol , vol.14 , pp. 243-254
    • McCormick, J.R.1    Su, E.P.2    Driks, A.3    Losick, R.4
  • 9
    • 27644540151 scopus 로고    scopus 로고
    • FtsZ and the division of prokaryotic cells and organelles
    • Margolin, W. FtsZ and the division of prokaryotic cells and organelles. Nat. Rev. Mol. Cell Biol. 6, 862-871 (2005).
    • (2005) Nat. Rev. Mol. Cell Biol , vol.6 , pp. 862-871
    • Margolin, W.1
  • 10
    • 17644427311 scopus 로고    scopus 로고
    • Dynamics of FtsZ assembly during sporulation in Streptomyces coelicolor.A3(2)
    • Grantcharova, N., Lustig, U., & Flärdh, K. Dynamics of FtsZ assembly during sporulation in Streptomyces coelicolor.A3(2). J. Bacteriol. 187, 3227-3237 (2005).
    • (2005) J. Bacteriol , vol.187 , pp. 3227-3237
    • Grantcharova, N.1    Lustig, U.2    Flärdh, K.3
  • 12
    • 55549130778 scopus 로고    scopus 로고
    • Assemblies of DivIVA mark sites for hyphal branching and can establish new zones of cell wall growth in Streptomyces coelicolor
    • Hempel, A. M., Wang, S. B., Letek, M., Gil, J. A., & Flärdh, K. Assemblies of DivIVA mark sites for hyphal branching and can establish new zones of cell wall growth in Streptomyces coelicolor. J. Bacteriol. 190, 7579-7583 (2008).
    • (2008) J. Bacteriol , vol.190 , pp. 7579-7583
    • Hempel, A.M.1    Wang, S.B.2    Letek, M.3    Gil, J.A.4    Flärdh, K.5
  • 13
    • 79951668336 scopus 로고    scopus 로고
    • Replisome trafficking in growing vegetative hyphae of Streptomyces coelicolor. A3(2)
    • Wolanski, M. et al. Replisome trafficking in growing vegetative hyphae of Streptomyces coelicolor. A3(2). J. Bacteriol. 193, 1273-1275 (2011).
    • (2011) J. Bacteriol , vol.193 , pp. 1273-1275
    • Wolanski, M.1
  • 14
    • 55049110121 scopus 로고    scopus 로고
    • Time-lapse microscopy of Streptomyces coelicolor.Growth and sporulation
    • Jyothikumar, V., Tilley, E. J., Wali, R., & Herron, P. R. Time-lapse microscopy of Streptomyces coelicolor.growth and sporulation. Appl. Environ. Microbiol. 74, 6774-6781 (2008).
    • (2008) Appl. Environ. Microbiol , vol.74 , pp. 6774-6781
    • Jyothikumar, V.1    Tilley, E.J.2    Wali, R.3    Herron, P.R.4
  • 15
    • 78650917468 scopus 로고    scopus 로고
    • Positive control of cell division: FtsZ is recruited by SsgB during sporulation of Streptomyces
    • Willemse, J., Borst, J. W., de Waal, E., Bisseling, T., & van Wezel, G. P. Positive control of cell division: FtsZ is recruited by SsgB during sporulation of Streptomyces. Genes. Dev. 25, 89-99 (2011).
    • (2011) Genes. Dev , vol.25 , pp. 89-99
    • Willemse, J.1    Borst, J.W.2    De Waal, E.3    Bisseling, T.4    Van Wezel, G.P.5
  • 16
  • 17
    • 84865161579 scopus 로고    scopus 로고
    • Expression of the chaplin and rodlin hydrophobic sheath proteins in Streptomyces venezuelae.Is controlled by sigma(BldN) and a cognate anti-sigma factor
    • Bibb, M. J., Domonkos, A., Chandra, G., & Buttner, M. J. Expression of the chaplin and rodlin hydrophobic sheath proteins in Streptomyces venezuelae.is controlled by sigma(BldN) and a cognate anti-sigma factor, RsbN. Mol. Microbiol. 84, 1033-1049 (2012).
    • (2012) Rsbn. Mol. Microbiol , vol.84 , pp. 1033-1049
    • Bibb, M.J.1    Domonkos, A.2    Chandra, G.3    Buttner, M.J.4
  • 18
    • 84912547374 scopus 로고    scopus 로고
    • Response regulator heterodimer formation controls a key stage in Streptomyces.Development
    • Al-Bassam, M. M., Bibb, M. J., Bush, M. J., Chandra, G., & Buttner, M. J. Response regulator heterodimer formation controls a key stage in Streptomyces.development. PLoS Genet. 10, e1004554 (2014).
    • (2014) Plos Genet , vol.10
    • Al-Bassam, M.M.1    Bibb, M.J.2    Bush, M.J.3    Chandra, G.4    Buttner, M.J.5
  • 19
    • 84887179587 scopus 로고    scopus 로고
    • Genes required for aerial growth, cell division, and chromosome segregation are targets of WhiA before sporulation in Streptomyces venezuelae
    • Bush, M. J., Bibb, M. J., Chandra, G., Findlay, K. C., & Buttner, M. J. Genes required for aerial growth, cell division, and chromosome segregation are targets of WhiA before sporulation in Streptomyces venezuelae. MBio. 4, e00684-00613 (2013).
    • (2013) Mbio , vol.4 , pp. e00684-e00613
    • Bush, M.J.1    Bibb, M.J.2    Chandra, G.3    Findlay, K.C.4    Buttner, M.J.5
  • 20
    • 84907308411 scopus 로고    scopus 로고
    • Tetrameric c-di-GMP mediates effective transcription factor dimerization to control Streptomyces.Development
    • Tschowri, N. et al. Tetrameric c-di-GMP mediates effective transcription factor dimerization to control Streptomyces.development. Cell. 158, 1136-1147 (2014).
    • (2014) Cell , vol.158 , pp. 1136-1147
    • Tschowri, N.1
  • 21
    • 84937799156 scopus 로고    scopus 로고
    • MreB-Dependent Inhibition of Cell Elongation during the Escape from Competence in Bacillus subtilis
    • Mirouze, N., Ferret, C., Yao, Z., Chastanet, A., & Carballido-Lòpez, R. MreB-Dependent Inhibition of Cell Elongation during the Escape from Competence in Bacillus subtilis. PLoS Genet. 11, e1005299 (2015).
    • (2015) Plos Genet , vol.11
    • Mirouze, N.1    Ferret, C.2    Yao, Z.3    Chastanet, A.4    Carballido-Lòpez, R.5
  • 22
    • 84880678614 scopus 로고    scopus 로고
    • Acquiring fluorescence time-lapse movies of budding yeast and analyzing single-cell dynamics using GRAFTS
    • Zopf, C. J., & Maheshri, N. Acquiring fluorescence time-lapse movies of budding yeast and analyzing single-cell dynamics using GRAFTS. J. Vis. Exp., e50456 (2013).
    • (2013) J. Vis. Exp
    • Zopf, C.J.1    Maheshri, N.2
  • 23
    • 84905650444 scopus 로고    scopus 로고
    • Subpolar addition of new cell wall is directed by DivIVA in mycobacteria
    • Meniche, X. et al. Subpolar addition of new cell wall is directed by DivIVA in mycobacteria. Proc. Natl. Acad. Sci. U S A. 111, E3243-3251 (2014).
    • (2014) Proc. Natl. Acad. Sci. U S A , vol.111 , pp. E3243-E3251
    • Meniche, X.1
  • 24
    • 84873550617 scopus 로고    scopus 로고
    • Chromosome segregation impacts on cell growth and division site selection in Corynebacterium glutamicum
    • Donovan, C., Schauss, A., Kramer, R., & Bramkamp, M. Chromosome segregation impacts on cell growth and division site selection in Corynebacterium glutamicum. PLoS One. 8, e55078 (2013).
    • (2013) Plos One , vol.8
    • Donovan, C.1    Schauss, A.2    Kramer, R.3    Bramkamp, M.4
  • 25
    • 84901675729 scopus 로고    scopus 로고
    • Response of Escherichia coli. Growth rate to osmotic shock
    • Rojas, E., Theriot, J. A., & Huang, K. C. Response of Escherichia coli. growth rate to osmotic shock. Proc. Natl. Acad. Sci. U S A. 111, 7807-7812 (2014).
    • (2014) Proc. Natl. Acad. Sci. U S A , vol.111 , pp. 7807-7812
    • Rojas, E.1    Theriot, J.A.2    Huang, K.C.3
  • 26
    • 0141789744 scopus 로고    scopus 로고
    • Essential role of DivIVA in polar growth and morphogenesis in Streptomyces coelicolor. A3(2)
    • Flärdh, K. Essential role of DivIVA in polar growth and morphogenesis in Streptomyces coelicolor. A3(2). Mol. Microbiol. 49, 1523-1536 (2003).
    • (2003) Mol. Microbiol , vol.49 , pp. 1523-1536
    • Flärdh, K.1
  • 27
    • 79955024764 scopus 로고    scopus 로고
    • High-throughput, subpixel precision analysis of bacterial morphogenesis and intracellular spatio-temporal dynamics
    • Sliusarenko, O., Heinritz, J., Emonet, T., & Jacobs-Wagner, C. High-throughput, subpixel precision analysis of bacterial morphogenesis and intracellular spatio-temporal dynamics. Mol. Microbiol. 80, 612-627 (2011).
    • (2011) Mol. Microbiol , vol.80 , pp. 612-627
    • Sliusarenko, O.1    Heinritz, J.2    Emonet, T.3    Jacobs-Wagner, C.4
  • 28
    • 84860653367 scopus 로고    scopus 로고
    • Measuring single-cell gene expression dynamics in bacteria using fluorescence time-lapse microscopy
    • Young, J. W. et al. Measuring single-cell gene expression dynamics in bacteria using fluorescence time-lapse microscopy. Nat. Protoc. 7, 80-88 (2012).
    • (2012) Nat. Protoc , vol.7 , pp. 80-88
    • Young, J.W.1
  • 29
    • 33845792555 scopus 로고    scopus 로고
    • CellProfiler: Image analysis software for identifying and quantifying cell phenotypes
    • Carpenter, A. E. et al. CellProfiler: image analysis software for identifying and quantifying cell phenotypes. Genome Biol. 7, R100 (2006).
    • (2006) Genome Biol , vol.7 , pp. R100
    • Carpenter, A.E.1
  • 30
    • 84925969842 scopus 로고    scopus 로고
    • Synthesis of fluorescent D-amino acids and their use for probing peptidoglycan synthesis and bacterial growth in situ
    • Kuru, E., Tekkam, S., Hall, E., Brun, Y. V., & Van Nieuwenhze, M. S. Synthesis of fluorescent D-amino acids and their use for probing peptidoglycan synthesis and bacterial growth in situ. Nat. Protoc. 10, 33-52 (2015).
    • (2015) Nat. Protoc , vol.10 , pp. 33-52
    • Kuru, E.1    Tekkam, S.2    Hall, E.3    Brun, Y.V.4    Van Nieuwenhze, M.S.5
  • 31
    • 84885453504 scopus 로고    scopus 로고
    • Topoisomerase I (TopA) is recruited to ParB complexes and is required for proper chromosome organization during Streptomyces coelicolor. sporulation
    • Szafran, M. et al. Topoisomerase I (TopA) is recruited to ParB complexes and is required for proper chromosome organization during Streptomyces coelicolor. sporulation. J. Bacteriol. 195, 4445-4455 (2013).
    • (2013) J. Bacteriol , vol.195 , pp. 4445-4455
    • Szafran, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.