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Volumn 6, Issue , 2016, Pages

An integrated platform for large-scale data collection and precise perturbation of live Drosophila embryos

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; DEVICES; DROSOPHILA MELANOGASTER; EMBRYO DEVELOPMENT; EMBRYOLOGY; FLUORESCENCE IMAGING; HIGH THROUGHPUT SCREENING; HYPOXIA; IMAGE PROCESSING; LAB ON A CHIP; NONMAMMALIAN EMBRYO; PATHOLOGY; PHYSIOLOGY; PROCEDURES; SOFTWARE; ULTRASTRUCTURE;

EID: 84958568767     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep21366     Document Type: Article
Times cited : (20)

References (41)
  • 1
    • 57349128823 scopus 로고    scopus 로고
    • Dynamic analyses of drosophila gastrulation provide insights into collective cell migration
    • McMahon, A., Supatto, W., Fraser, S. E. & Stathopoulos, A. Dynamic Analyses of Drosophila Gastrulation Provide Insights into Collective Cell Migration. Science 322, 1546-1550 doi: 10.1126/science.1167094 (2008).
    • (2008) Science , vol.322 , pp. 1546-1550
    • McMahon, A.1    Supatto, W.2    Fraser, S.E.3    Stathopoulos, A.4
  • 2
    • 84859915535 scopus 로고    scopus 로고
    • Differential positioning of adherens junctions is associated with initiation of epithelial folding
    • Wang, Y. C., Khan, Z., Kaschube, M. & Wieschaus, E. F. Differential positioning of adherens junctions is associated with initiation of epithelial folding. Nature 484, 390-393 doi: 10.1038/nature10938 (2012).
    • (2012) Nature , vol.484 , pp. 390-393
    • Wang, Y.C.1    Khan, Z.2    Kaschube, M.3    Wieschaus, E.F.4
  • 3
    • 84867298752 scopus 로고    scopus 로고
    • Forces driving epithelial spreading in zebrafish gastrulation
    • Behrndt, M. et al. Forces Driving Epithelial Spreading in Zebrafish Gastrulation. Science 338, 257-260 doi: 10.1126/science.1224143 (2012).
    • (2012) Science , vol.338 , pp. 257-260
    • Behrndt, M.1
  • 4
    • 84863195203 scopus 로고    scopus 로고
    • Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy
    • Tomer, R., Khairy, K., Amat, F. & Keller, P. J. Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy. Nat Methods 9, 755-U181 doi: 10.1038/Nmeth.2062 (2012).
    • (2012) Nat Methods , vol.9 , pp. U181-755
    • Tomer, R.1    Khairy, K.2    Amat, F.3    Keller, P.J.4
  • 5
    • 84863198418 scopus 로고    scopus 로고
    • Multiview light-sheet microscope for rapid in toto imaging
    • Krzic, U., Gunther, S., Saunders, T. E., Streichan, S. J. & Hufnagel, L. Multiview light-sheet microscope for rapid in toto imaging. Nat Methods 9, 730-U304 doi: 10.1038/Nmeth.2064 (2012).
    • (2012) Nat Methods , vol.9 , pp. U304-730
    • Krzic, U.1    Gunther, S.2    Saunders, T.E.3    Streichan, S.J.4    Hufnagel, L.5
  • 6
    • 84878753732 scopus 로고    scopus 로고
    • Imaging morphogenesis: Technological advances and biological insights
    • doi: Artn1234168
    • Keller, P. J. Imaging Morphogenesis: Technological Advances and Biological Insights. Science 340, 1184-+, doi: Artn 1234168 10.1126/Science.1234168. (2013)
    • (2013) Science , vol.340 , pp. 1184
    • Keller, P.J.1
  • 7
    • 84910640991 scopus 로고    scopus 로고
    • A generalizable, tunable microfluidic platform for delivering fast temporally varying chemical signals to probe single-cell response dynamics
    • Chingozha, L., Zhan, M., Zhu, C. & Lu, H. A Generalizable, Tunable Microfluidic Platform for Delivering Fast Temporally Varying Chemical Signals to Probe Single-Cell Response Dynamics. Anal Chem 86, 10138-10147, doi: 10.1021/ac5019843 (2014)
    • (2014) Anal Chem , vol.86 , pp. 10138-10147
    • Chingozha, L.1    Zhan, M.2    Zhu, C.3    Lu, H.4
  • 8
    • 84880328076 scopus 로고    scopus 로고
    • A screen for morphological complexity identifies regulators of switch-like transitions between discrete cell shapes
    • Yin, Z. et al. A screen for morphological complexity identifies regulators of switch-like transitions between discrete cell shapes. Nat Cell Biol 15, 860-+, doi: 10.1038/ncb2764 (2013).
    • (2013) Nat Cell Biol , vol.15
    • Yin, Z.1
  • 9
    • 46249092235 scopus 로고    scopus 로고
    • Automated on-chip rapid microscopy, phenotyping and sorting of C. Elegans
    • Chung, K. H., Crane, M. M. & Lu, H. Automated on-chip rapid microscopy, phenotyping and sorting of C. elegans. Nat Methods 5, 637-643 (2008). doi: 10.1038/Nmeth.1227.
    • (2008) Nat Methods , vol.5 , pp. 637-643
    • Chung, K.H.1    Crane, M.M.2    Lu, H.3
  • 10
    • 79551572775 scopus 로고    scopus 로고
    • A microfluidic array for large-scale ordering and orientation of embryos
    • Chung, K. et al. A microfluidic array for large-scale ordering and orientation of embryos. Nat Methods 8, 171-U103 doi: 10.1038/Nmeth.1548 (2011).
    • (2011) Nat Methods , vol.8 , pp. U103-171
    • Chung, K.1
  • 11
    • 84875505752 scopus 로고    scopus 로고
    • Microfluidic trap array for massively parallel imaging of Drosophila embryos
    • Levario, T. J., Zhan, M., Lim, B., Shvartsman, S. Y. & Lu, H. Microfluidic trap array for massively parallel imaging of Drosophila embryos. Nat Protoc 8, 721-736, doi: 10.1038/nprot.2013.034 (2013).
    • (2013) Nat Protoc , vol.8 , pp. 721-736
    • Levario, T.J.1    Zhan, M.2    Lim, B.3    Shvartsman, S.Y.4    Lu, H.5
  • 12
    • 80054884866 scopus 로고    scopus 로고
    • A computational statistics approach for estimating the spatial range of morphogen gradients
    • Kanodia, J. S. et al. A computational statistics approach for estimating the spatial range of morphogen gradients. Development 138, 4867-4874 doi: 10.1242/Dev.071571 (2011).
    • (2011) Development , vol.138 , pp. 4867-4874
    • Kanodia, J.S.1
  • 13
    • 79958195843 scopus 로고    scopus 로고
    • Gene regulation by MAPK substrate competition
    • Kim, Y. et al. Gene Regulation by MAPK Substrate Competition. Dev Cell 20, 880-887 doi: 10.1016/j.devcel.2011.05.009 (2011).
    • (2011) Dev Cell , vol.20 , pp. 880-887
    • Kim, Y.1
  • 14
    • 84879321818 scopus 로고    scopus 로고
    • Kinetics of gene derepression by ERK signaling
    • Lim, B. et al. Kinetics of gene derepression by ERK signaling. P Natl Acad Sci USA 110, 10330-10335 doi: 10.1073/pnas.1303635110 (2013).
    • (2013) P Natl Acad Sci USA , vol.110 , pp. 10330-10335
    • Lim, B.1
  • 15
    • 84937524573 scopus 로고    scopus 로고
    • Dynamics of inductive ERK signaling in the drosophila embryo
    • Lim, B. et al. Dynamics of Inductive ERK Signaling in the Drosophila Embryo. Curr Biol 25, 1784-1790 doi: 10.1016/j. cub.2015.05.039 (2015).
    • (2015) Curr Biol , vol.25 , pp. 1784-1790
    • Lim, B.1
  • 16
    • 84884595363 scopus 로고    scopus 로고
    • Talin Autoinhibition is Required for Morphogenesis
    • Ellis, S. J. et al. Talin Autoinhibition Is Required for Morphogenesis. Curr Biol 23, 1825-1833 doi: 10.1016/j.cub.2013.07.054 (2013).
    • (2013) Curr Biol , vol.23 , pp. 1825-1833
    • Ellis, S.J.1
  • 17
    • 84903975376 scopus 로고    scopus 로고
    • Automated multidimensional image analysis reveals a role for Abl in embryonic wound repair
    • Zulueta-Coarasa, T., Tamada, M., Lee, E. J. & Fernandez-Gonzalez, R. Automated multidimensional image analysis reveals a role for Abl in embryonic wound repair. Development 141, 2901-2911 doi: 10.1242/Dev.106898 (2014).
    • (2014) Development , vol.141 , pp. 2901-2911
    • Zulueta-Coarasa, T.1    Tamada, M.2    Lee, E.J.3    Fernandez-Gonzalez, R.4
  • 18
    • 84930575028 scopus 로고    scopus 로고
    • Decrease in cell volume generates contractile forces driving dorsal closure
    • Saias, L. et al. Decrease in Cell Volume Generates Contractile Forces Driving Dorsal Closure. Dev Cell 33, 611-621 doi: 10.1016/j. devcel.2015.03.016 (2015).
    • (2015) Dev Cell , vol.33 , pp. 611-621
    • Saias, L.1
  • 19
    • 12344281742 scopus 로고    scopus 로고
    • Hypoxia induces major effects on cell cycle kinetics and protein expression in Drosophila melanogaster embryos
    • Douglas, R. M. et al. Hypoxia induces major effects on cell cycle kinetics and protein expression in Drosophila melanogaster embryos. American journal of physiology. Regulatory, integrative and comparative physiology 288, R511-521 doi: 10.1152/ajpregu.00520.2004 (2005).
    • (2005) American Journal of Physiology. Regulatory, Integrative and Comparative Physiology , vol.288 , pp. R511-521
    • Douglas, R.M.1
  • 20
    • 0020497301 scopus 로고
    • Flow in curved pipes
    • Berger, S. A., Talbot, L. & Yao, L. S. Flow in Curved Pipes. Annu Rev Fluid Mech 15, 461-512 doi: 10.1146/annurev. fl.15.010183.002333 (1983).
    • (1983) Annu Rev Fluid Mech , vol.15 , pp. 461-512
    • Berger, S.A.1    Talbot, L.2    Yao, L.S.3
  • 21
    • 37649022478 scopus 로고    scopus 로고
    • Continuous inertial focusing, ordering, and separation of particles in microchannels
    • Di Carlo, D., Irimia, D., Tompkins, R. G. & Toner, M. Continuous inertial focusing, ordering, and separation of particles in microchannels. P Natl Acad Sci USA 104, 18892-18897 doi: 10.1073/pnas.0704958104 (2007).
    • (2007) P Natl Acad Sci USA , vol.104 , pp. 18892-18897
    • Di Carlo, D.1    Irimia, D.2    Tompkins, R.G.3    Toner, M.4
  • 22
    • 54349103530 scopus 로고    scopus 로고
    • Continuous particle separation in spiral microchannels using dean flows and differential migration
    • Bhagat, A. A. S., Kuntaegowdanahalli, S. S. & Papautsky, I. Continuous particle separation in spiral microchannels using dean flows and differential migration. Lab Chip 8, 1906-1914 doi: 10.1039/B807107a (2008).
    • (2008) Lab Chip , vol.8 , pp. 1906-1914
    • Bhagat, A.A.S.1    Kuntaegowdanahalli, S.S.2    Papautsky, I.3
  • 23
    • 84879902242 scopus 로고    scopus 로고
    • CLIP-continuous live imaging platform for direct observation of C. Elegans physiological processes
    • Krajniak, J., Hao, Y., Mak, H. Y. & Lu, H. CLIP-continuous live imaging platform for direct observation of C. elegans physiological processes. Lab Chip 13, 2963-2971 doi: 10.1039/C3lc50300c (2013).
    • (2013) Lab Chip , vol.13 , pp. 2963-2971
    • Krajniak, J.1    Hao, Y.2    Mak, H.Y.3    Lu, H.4
  • 24
    • 84908284941 scopus 로고    scopus 로고
    • A multi-channel device for high-density target-selective stimulation and long-term monitoring of cells and subcellular features in C. Elegans
    • Lee, H. et al. A multi-channel device for high-density target-selective stimulation and long-term monitoring of cells and subcellular features in C. elegans. Lab Chip 14, 4513-4522 doi: 10.1039/C4lc00789a (2014).
    • (2014) Lab Chip , vol.14 , pp. 4513-4522
    • Lee, H.1
  • 25
    • 0020531221 scopus 로고
    • Studies of nuclear and cytoplasmic behavior during the 5 mitotic-cycles that precede gastrulation in drosophila embryogenesis
    • Foe, V. E. & Alberts, B. M. Studies of Nuclear and Cytoplasmic Behavior during the 5 Mitotic-Cycles That Precede Gastrulation in Drosophila Embryogenesis. J Cell Sci 61, 31-70 (1983).
    • (1983) J Cell Sci , vol.61 , pp. 31-70
    • Foe, V.E.1    Alberts, B.M.2
  • 26
    • 0030026954 scopus 로고    scopus 로고
    • Hypoxia alters early gestation human cytotrophoblast differentiation/invasion in vitro and models the placental defects that occur in preeclampsia
    • Genbacev, O., Joslin, R., Damsky, C. H., Polliotti, B. M. & Fisher, S. J. Hypoxia alters early gestation human cytotrophoblast differentiation/invasion in vitro and models the placental defects that occur in preeclampsia. The Journal of clinical investigation 97, 540-550 doi: 10.1172/JCI118447 (1996).
    • (1996) The Journal of Clinical Investigation , vol.97 , pp. 540-550
    • Genbacev, O.1    Joslin, R.2    Damsky, C.H.3    Polliotti, B.M.4    Fisher, S.J.5
  • 27
    • 0033538439 scopus 로고    scopus 로고
    • Nitric oxide contributes to behavioral, cellular, and developmental responses to low oxygen in Drosophila
    • Wingrove, J. A. & O'Farrell, P. H. Nitric oxide contributes to behavioral, cellular, and developmental responses to low oxygen in Drosophila. Cell 98, 105-114 doi: 10.1016/S0092-8674(00)80610-8 (1999).
    • (1999) Cell , vol.98 , pp. 105-114
    • Wingrove, J.A.1    O'Farrell, P.H.2
  • 28
    • 41149115123 scopus 로고    scopus 로고
    • The role of oxygen availability in embryonic development and stem cell function
    • Simon, M. C. & Keith, B. The role of oxygen availability in embryonic development and stem cell function. Nature reviews. Molecular cell biology 9, 285-296 doi: 10.1038/nrm2354 (2008).
    • (2008) Nature Reviews. Molecular Cell Biology , vol.9 , pp. 285-296
    • Simon, M.C.1    Keith, B.2
  • 29
    • 71649094085 scopus 로고    scopus 로고
    • The role of hypoxia in development of the Mammalian embryo
    • Dunwoodie, S. L. The role of hypoxia in development of the Mammalian embryo. Dev Cell 17, 755-773 doi: 10.1016/j. devcel.2009.11.008 (2009).
    • (2009) Dev Cell , vol.17 , pp. 755-773
    • Dunwoodie, S.L.1
  • 30
    • 0035910512 scopus 로고    scopus 로고
    • Hypoxia and nitric oxide induce a rapid, reversible cell cycle arrest of the drosophila syncytial divisions
    • DiGregorio, P. J., Ubersax, J. A. & O'Farrell, P. H. Hypoxia and nitric oxide induce a rapid, reversible cell cycle arrest of the drosophila syncytial divisions. J Biol Chem 276, 1930-1937 (2001).
    • (2001) J Biol Chem , vol.276 , pp. 1930-1937
    • DiGregorio, P.J.1    Ubersax, J.A.2    O'Farrell, P.H.3
  • 31
    • 0035041604 scopus 로고    scopus 로고
    • Cell cycle progression and cell division are sensitive to hypoxia in Drosophila melanogaster embryos
    • Douglas, R. M., Xu, T. & Haddad, G. G. Cell cycle progression and cell division are sensitive to hypoxia in Drosophila melanogaster embryos. Am J Physiol-Reg I 280, R1555-R1563 (2001).
    • (2001) Am J Physiol-Reg I , vol.280 , pp. R1555-R1563
    • Douglas, R.M.1    Xu, T.2    Haddad, G.G.3
  • 32
    • 9244221681 scopus 로고    scopus 로고
    • The mitotic arrest in response to hypoxia and of polar bodies during early embryogenesis requires Drosophila Mps1
    • Fischer, M. G., Heeger, S., Hacker, U. & Lehner, C. F. The mitotic arrest in response to hypoxia and of polar bodies during early embryogenesis requires Drosophila Mps1. Curr Biol 14, 2019-2024 doi: 10.1016/j.cub.2004.11.008 (2004).
    • (2004) Curr Biol , vol.14 , pp. 2019-2024
    • Fischer, M.G.1    Heeger, S.2    Hacker, U.3    Lehner, C.F.4
  • 33
    • 34548570003 scopus 로고    scopus 로고
    • Rapid effects of acute anoxia on spindle kinetochore interactions activate the mitotic spindle checkpoint
    • Pandey, R., Heeger, S. & Lehner, C. F. Rapid effects of acute anoxia on spindle kinetochore interactions activate the mitotic spindle checkpoint. J Cell Sci 120, 2807-2818 doi: 10.1242/Jcs.007690 (2007).
    • (2007) J Cell Sci , vol.120 , pp. 2807-2818
    • Pandey, R.1    Heeger, S.2    Lehner, C.F.3
  • 34
    • 0021952110 scopus 로고
    • Reversible chromosome condensation induced in drosophila embryos by anoxia-visualization of interphase nuclear-organization
    • Foe, V. E. & Alberts, B. M. Reversible Chromosome Condensation Induced in Drosophila Embryos by Anoxia-Visualization of Interphase Nuclear-Organization. J Cell Biol 100, 1623-1636 doi: 10.1083/jcb.100.5.1623 (1985).
    • (1985) J Cell Biol , vol.100 , pp. 1623-1636
    • Foe, V.E.1    Alberts, B.M.2
  • 35
    • 0037415685 scopus 로고    scopus 로고
    • Nitric oxide-induced suspended animation promotes survival during hypoxia
    • Teodoro, R. O. & O'Farrell, P. H. Nitric oxide-induced suspended animation promotes survival during hypoxia. Embo J 22, 580-587 doi: 10.1093/Emboj/Cdg070 (2003).
    • (2003) Embo J , vol.22 , pp. 580-587
    • Teodoro, R.O.1    O'Farrell, P.H.2
  • 36
    • 0032185810 scopus 로고    scopus 로고
    • Localization of ASH1 mRNA particles in living yeast
    • Bertrand, E. et al. Localization of ASH1 mRNA particles in living yeast. Molecular cell 2, 437-445 (1998).
    • (1998) Molecular Cell , vol.2 , pp. 437-445
    • Bertrand, E.1
  • 37
    • 0038376482 scopus 로고    scopus 로고
    • Live imaging of endogenous RNA reveals a diffusion and entrapment mechanism for nanos mRNA localization in Drosophila
    • Forrest, K. M. & Gavis, E. R. Live imaging of endogenous RNA reveals a diffusion and entrapment mechanism for nanos mRNA localization in Drosophila. Curr Biol 13, 1159-1168 (2003).
    • (2003) Curr Biol , vol.13 , pp. 1159-1168
    • Forrest, K.M.1    Gavis, E.R.2
  • 38
    • 79956091059 scopus 로고    scopus 로고
    • A Drosophila model for fetal alcohol syndrome disorders: Role for the insulin pathway
    • McClure, K. D., French, R. L. & Heberlein, U. A Drosophila model for fetal alcohol syndrome disorders: role for the insulin pathway. Dis Model Mech 4, 335-346 doi: 10.1242/Dmm.006411 (2011).
    • (2011) Dis Model Mech , vol.4 , pp. 335-346
    • McClure, K.D.1    French, R.L.2    Heberlein, U.3
  • 39
    • 84887217839 scopus 로고    scopus 로고
    • The microcephaly protein Asp regulates neuroepithelium morphogenesis by controlling the spatial distribution of myosin II
    • Rujano, M. A., Sanchez-Pulido, L., Pennetier, C., le Dez, G. & Basto, R. The microcephaly protein Asp regulates neuroepithelium morphogenesis by controlling the spatial distribution of myosin II. Nat Cell Biol 15, 1294-U1287 doi: 10.1038/Ncb2858 (2013).
    • (2013) Nat Cell Biol , vol.15 , pp. U1287-1294
    • Rujano, M.A.1    Sanchez-Pulido, L.2    Pennetier, C.3    Le Dez, G.4    Basto, R.5
  • 40
    • 79955749505 scopus 로고    scopus 로고
    • Human Disease Models in Drosophila melanogaster and the Role of the Fly in Therapeutic Drug Discovery
    • Pandey, U. B. & Nichols, C. D. Human Disease Models in Drosophila melanogaster and the Role of the Fly in Therapeutic Drug Discovery. Pharmacol Rev 63, 411-436 doi: 10.1124/pr.110.003293 (2011).
    • (2011) Pharmacol Rev , vol.63 , pp. 411-436
    • Pandey, U.B.1    Nichols, C.D.2
  • 41
    • 0032403465 scopus 로고    scopus 로고
    • Rapid prototyping of microfluidic systems in poly(dimethylsiloxane)
    • Duffy, D. C., McDonald, J. C., Schueller, O. J. A. & Whitesides, G. M. Rapid prototyping of microfluidic systems in poly(dimethylsiloxane). Anal Chem 70, 4974-4984 doi: 10.1021/Ac980656z (1998).
    • (1998) Anal Chem , vol.70 , pp. 4974-4984
    • Duffy, D.C.1    McDonald, J.C.2    Schueller, O.J.A.3    Whitesides, G.M.4


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