Three complementary approaches to parallelization of local BLAST service on workstation clusters

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 1662, Issue , 1999, Pages 271-282

  Pedretti, K T ^a   Casavant, T L ^a   Braun, R C ^a   Scheetz, T E ^a   Birkett, C L ^a   Roberts, C A ^a  

^a University of Iowa   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84957887512     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/3-540-48387-X_29     Document Type: Conference Paper

References (8)

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2. M. Berks, “The C. elegans genome sequencing project,” Genome Research, Volume 5, 1995, pp. 99-104.
3. J. A. Blake, J. E. Richardson, M. T. Davisson, J. T. Eppig and the Mouse Genome Informatics Group. “The Mouse Genome Database (MGD). A comprehensive public resource of genetic, phenotypic and genomic data,” Nucleic Acids Res, Volume 25, Number 1, 1997, pp. 85-91.
4. Deparment of Energy, “Five Years of Progress in the Human Genome Project,” Human Genome News, Volume 7, Numbers 3-4, September-December 1995. Available via the WWW from www.ornl.govinTechResources/Human Genome/publicat/hgn/v7n3/04progre.html (September, 1997).
5. D. G. Feitelson and L. Rudolph (eds.), Springer-Verlag. “Job Scheduling Under the Portable Batch System,” Lecture Nodes in Computer Science Vol. 949, 1995.
6. R. W. Hockney and C. R. Jesshope, Parallel Computers 2: Architecture, Programming, and Algorithms, IOP Publishing, 1988.
7. T. E. Scheetz, C. L. Birkett, T. A. Braun, D. Nishimura, V. C. Sheffield, M. B. Soares, T. JL. Casavant, Depts. of Electrical and Computer Engineering, Pediatrics, and Physiology and Biophysics, University of Iowa, Iowa City. “Informatics for preparation of EST reads in a mixed-tissue cDNA library setting,” Proceedings of the 1998 meeting on Genome Mapping, Sequencing, and Biology, Cold Spring Harbor, New York, pp. 205.
8. M. B. Soares, G. Beck, B. Berger, C. L. Birkett, E. A. Black, M. F. Bonaldo, R. C. Braun, T. A. Braun, M. Donahue, S. Kaliannan, R. Kincaid, V. Miljokovic, K. J. Munn, D. Nishimura, K. T. Pedretti, T. E. Scheetz, L. H. Stier, T. L. Casavant, V. C. Sheffield, Depts. of Electrical and Computer Engineering, Pediatrics, and Physiology and Biophysics, University of Iowa, Iowa City. “A program for rat gene discovery and mapping,” Proceedings of the 1998 meeting on Genome Mapping, Sequencing, and Biology, Cold Springs Harbor, New York, pp. 212.