NAMD: A case study in multilingual parallel programming

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 1366, Issue , 1998, Pages 367-381

  Kale L V ^a   Bhandarkar, M ^a   Brunner, R ^a   Krawetz, N ^a   Phillips, J ^a   Shinozaki, A ^a  

^a University of Illinois at Urbana Champaign   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84957876653     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/BFb0032705     Document Type: Conference Paper

References (15)

1. Milind Bhandarkar and L. V. Kale. MICE: A Prototype MPI Implementation in Converse Environment. In Proceedings of the second MPI Developers Conference, pages 26-31, South Bend, Indiana, July 1996.
2. F. Bodin, P. Beckman, D. Gannon, S. Narayana, and S. Yang. Distributed pC++: Basic Ideas for an Object Parallel Language. Scientific Programming, 2(3), 1993.
3. N. Carriero and D. Gelemter. Linda in Context. Communications of the ACM, 32(4), April 1989.
4. A. Guxsoy. Simplified Expression of Message Driven Programs and Quantification of Their Impact on Performance. PhD thesis, University of Illinois at Urbana- Champaign, June 1994. Also, Technical Report UIUCDCS-R-94-1852
5. William F. Humphrey, Andrew Dalke, and Klaus Schulten. VMD - Visual molecular dynamics. Journal of Molecular Graphics, 14(l):33-38, 1996.
6. L. V. Kale, Milind Bhandarkar, Narain Jagathesan, Sanjeev Krishnan, and Joshua Yelon. Converse: An Interoperable Framework for Parallel Programming. In Proceedings of the 10th International Parallel Processing Symposium, pages 212-217, Honolulu, Hawaii, April 1996.
7. L. V. Kalé, Milind Bhandarkar, and Terry Wilmarth. Design and implementation of parallel java with a global object space. Technical report, Parallel Programming Laboratory, Department of Computer Science, University of Illinois at Urbana- Champaign, April 1997. Submitted for publication.
8. L.V. Kale. The Chare Kernel parallel programming language and system. In Proceedings of the International Conference on Parallel Processing, August 1990.
9. L.V. Kale and S. Krishnan. Charm++: A portable concurrent object oriented system based on C++. In Proceedings of the Conference on Object Oriented Programming Systems, Languages and Applications, September 1993.
10. L.V. Kale and Amitabh Sinha. Projections: A scalable performance tool. In Parallel Systems Fair, International Parallel Processing Symposium, pages 108-114, April 1993.
11. E. Komkven and L. V. Kale. Efficient implementation of high performance fortran via adaptive scheduling - an overview. In Proceedings of the International Workshop on Parallel Processing, Bangalore, India, December 1994.
12. Vance P. Morrison. Import/dome language reference manual. Technical report, US. Army Corps of Engineering Research Laboratory, ASSET group., 1995.
13. Mark Nelson, William Humphrey, Attila Gursoy, Andrew Dalke, Laxmikant Kale, Robert D. Skeel, and Klaus Schulten. NAMD— A parallel, object-oriented molecular dynamics program. J. Supercomputing App., 1996.
14. W. Rankin and J. Board. A portable distributed implementation of the parallel multipole tree algorithm. IEEE Symposium on High Performance Distributed Computing, 1995. [Duke University Technical Report 95-002].
15. Joshua Yelon and L. V. Kale. Agents: An undistorted representation of problem structure. In Lecture Notes in Computer Science, volume 1033, pages 551-565. Springer-Verlag, August 1995.