Xylan decoration patterns and the plant secondary cell wall molecular architecture

Biochemical Society Transactions

Volumn 44, Issue , 2016, Pages 74-78

  Busse Wicher, Marta ^a   Grantham, Nicholas J ^a   Lyczakowski, Jan J ^a   Nikolovski, Nino ^a   Dupree, Paul ^a  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

Author keywords

Cell wall; Cellulose; Decoration pattern; Docking; Molecular architecture; Xylan

Indexed keywords

CARBOHYDRATE; CELLULOSE; ENZYME; GLUCURONIC ACID SUBSTITUTION OF XYLAN ENZYME; UNCLASSIFIED DRUG; VEGETABLE PROTEIN; XYLAN;

ARTICLE; CELL STRUCTURE; CELL WALL; CHEMICAL STRUCTURE; CONFORMATION; ENZYME ANALYSIS; MOLECULAR INTERACTION; NONHUMAN; PHYLOGENY; PLANT CELL; PRIORITY JOURNAL; CARBOHYDRATE METABOLISM; CHEMISTRY; METABOLISM; PLANT;

CARBOHYDRATE METABOLISM; CELL WALL; CELLULOSE; PHYLOGENY; PLANTS; XYLANS;

EID: 84957871690     PISSN: 03005127     EISSN: 14708752     Source Type: Journal    
DOI: 10.1042/BST20150183     Document Type: Article

References (32)

1. Cosgrove, D.J. and Jarvis, M.C. (2012) Comparative structure and biomechanics of plant primary and secondary cell walls. Front. Plant Sci. 3, 204 Cross Ref Pub Med
2. Fernandes, A.N., Thomas, L.H., Altaner, C.M., Callow, P., Forsyth, V.T., Apperley, D.C., Kennedy, C.J. and Jarvis, M.C. (2011) Nanostructure of cellulose microfibrils in spruce wood. Proc. Natl. Acad. Sci. U. S. A. 108, E1195-E1203 Cross Ref Pub Med
3. Newman, R.H., Hill, S.J. and Harris, P.J. (2013) Wide-angle x-ray scattering and solid-state nuclear magnetic resonance data combined to test models for cellulose microfibrils in mung bean cell walls. Plant. Physiol. 163, 1558-1567 Cross Ref Pub Med
4. Cosgrove, D.J. (2014) Re-constructing our models of cellulose and primary cell wall assembly. Curr. Opin. Plant Biol. 22, 122-131 Cross Ref Pub Med
5. Oehme, D.P., Downton, M.T., Doblin, M.S., Wagner, J., Gidley, M.J. and Bacic, A. (2015) Unique aspects of the structure and dynamics of elementary Ibeta cellulose microfibrils revealed by computational simulations. Plant Physiol. 168, 3-17 Cross Ref Pub Med
6. Ebringerová , A. and Heinze, T. (2000) Xylan and xylan derivatives - biopolymers with valuable properties, 1. Naturally occurring xylans structures, isolation procedures and properties. Macromol. Rapid Commun. 21, 542-556 Cross Ref
7. Scheller, H.V. and Ulvskov, P. (2010) Hemicelluloses. Ann. Rev. Plant Biol. 61, 263-289 Cross Ref
8. Kabel, M.A., de Waard, P., Schols, H.A. and Voragen, A.G. (2003) Location of O-acetyl substituents in xylo-oligosaccharides obtained from hydrothermally treated Eucalyptus wood. Carbohydr. Res. 338, 69-77 Cross Ref Pub Med
9. Xiong, G., Cheng, K. and Pauly, M. (2013) Xylan O-acetylation impacts xylem development and enzymatic recalcitrance as indicated by the Arabidopsis mutant tbl29. Mol. Plant 6, 1373-1375 Cross Ref Pub Med
10. Xiong, G., Dama, M. and Pauly, M. (2015) Glucuronic acid moieties on xylan are functionally equivalent to O-acetyl-substituents. Mol. Plant 8, 1119-1121 Cross Ref Pub Med
11. Urbanowicz, B.R., Pena, M.J., Moniz, H.A., Moremen, K.W. and York, W.S. (2014) Two Arabidopsis proteins synthesize acetylated xylan in vitro. Plant J. 80, 197-206 Cross Ref Pub Med
12. Busse-Wicher, M., Gomes, T.C., Tryfona, T., Nikolovski, N., Stott, K., Grantham, N.J., Bolam, D.N., Skaf, M.S. and Dupree, P. (2014) The pattern of xylan acetylation suggests xylan may interact with cellulose microfibrils as a twofold helical screw in the secondary plant cell wall of Arabidopsis thaliana. Plant J. 79, 492-506 Cross Ref Pub Med
13. Chong, S.L., Virkki, L., Maaheimo, H., Juvonen, M., Derba-Maceluch, M., Koutaniemi, S., Roach, M., Sundberg, B., Tuomainen, P., Mellerowicz, E.J. and Tenkanen, M. (2014) O-acetylation of glucuronoxylan in Arabidopsis thaliana wild type and its change in xylan biosynthesis mutants. Glycobiology 24, 494-506 Cross Ref Pub Med
14. Urbanowicz, B.R., Pena, M.J., Ratnaparkhe, S., Avci, U., Backe, J., Steet, H.F., Foston, M., Li, H., O'Neill, M.A., Ragauskas, A.J. et al. (2012) 4-O-methylation of glucuronic acid in Arabidopsis glucuronoxylan is catalyzed by a domain of unknown function family 579 protein. Proc. Natl. Acad. Sci. U.S.A. 109, 14253-14258 Cross Ref Pub Med
15. Li, X., Jackson, P., Rubtsov, D.V., Faria-Blanc, N., Mortimer, J.C., Turner, S.R., Krogh, K.B., Johansen, K.S. and Dupree, P. (2013) Development and application of a high throughput carbohydrate profiling technique for analyzing plant cell wall polysaccharides and carbohydrate active enzymes. Biotechnol. Biofuels 6, 94 Cross Ref Pub Med
16. Mortimer, J.C., Miles, G.P., Brown, D.M., Zhang, Z., Segura, M.P., Weimar, T., Yu, X., Seffen, K.A., Stephens, E., Turner, S.R. and Dupree, P. (2010) Absence of branches from xylan in Arabidopsis gux mutants reveals potential for simplification of lignocellulosic biomass. Proc. Natl. Acad. Sci. U.S.A. 107, 17409-17414 Cross Ref Pub Med
17. Bromley, J.R., Busse-Wicher, M., Tryfona, T., Mortimer, J.C., Zhang, Z., Brown, D.M. and Dupree, P. (2013) GUX1 and GUX2 glucuronyltransferases decorate distinct domains of glucuronoxylan with different substitution patterns. Plant J. 74, 423-434 Cross Ref Pub Med
18. Rennie, E.A., Hansen, S.F., Baidoo, E.E., Hadi, M.Z., Keasling, J.D. and Scheller, H.V. (2012) Three members of the Arabidopsis glycosyltransferase family 8 are xylan glucuronosyltransferases. Plant Physiol. 159, 1408-1417 Cross Ref Pub Med
19. Mortimer, J.C., Faria-Blanc, N., Yu, X., Tryfona, T., Sorieul, M., Ng, Y.Z., Zhang, Z., Stott, K., Anders, N. and Dupree, P. (2015) An unusual xylan in Arabidopsis primary cell walls is synthesised by GUX3, IRX9L, IRX10L and IRX14. Plant J. 83, 413-426 Cross Ref Pub Med
20. Hurlbert, J.C. and Preston, J.F., 3rd. (2001) Functional characterization of a novel xylanase from a corn strain of Erwinia chrysanthemi. J. Bacteriol. 183, 2093-2100 Cross Ref Pub Med
21. St John, F.J., Hurlbert, J.C., Rice, J.D., Preston, J.F. and Pozharski, E. (2011) Ligand bound structures of a glycosyl hydrolase family 30 glucuronoxylan xylanohydrolase. J. Mol. Biol. 407, 92-109 Cross Ref Pub Med
22. Urbanikova, L., Vrsanska, M., Morkeberg Krogh, K.B., Hoff, T. and Biely, P. (2011) Structural basis for substrate recognition by Erwinia chrysanthemi GH30 glucuronoxylanase. FEBS J. 278, 2105-2116 Cross Ref Pub Med
23. Vrsanska, M., Kolenova, K., Puchart, V. and Biely, P. (2007) Mode of action of glycoside hydrolase family 5 glucuronoxylan xylanohydrolase from Erwinia chrysanthemi. FEBS J. 274, 1666-1677 Cross Ref Pub Med
24. Kulkarni, A.R., Pena, M.J., Avci, U., Mazumder, K., Urbanowicz, B.R., Pattathil, S., Yin, Y., O'Neill, M.A., Roberts, A.W., Hahn, M.G. et al. (2012) The ability of land plants to synthesize glucuronoxylans predates the evolution of tracheophytes. Glycobiology 22, 439-451 Cross Ref Pub Med
25. Tamura, K., Stecher, G., Peterson, D., Filipski, A. and Kumar, S. (2013) MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Mol. Biol. Evol. 30, 2725-2729 Cross Ref Pub Med
26. Guerriero, G., Fugelstad, J. and Bulone, V. (2010) What do we really know about cellulose biosynthesis in higher plants? J. Integr. Plant Biol. 52, 161-175 Cross Ref Pub Med
27. Rennie, E.A. and Scheller, H.V. (2014) Xylan biosynthesis. Curr. Opin Biotechnol. 26, 100-107 Cross Ref Pub Med
28. McFarlane, H.E., Doring, A. and Persson, S. (2014) The cell biology of cellulose synthesis. Annu. Rev Plant Biol. 65, 69-94 Cross Ref Pub Med
29. Kumar, M. and Turner, S. (2015) Plant cellulose synthesis: CESA proteins crossing kingdoms. Phytochemistry 112, 91-99 Cross Ref Pub Med
30. Nieduszynski, I. and Marchessault, R.H. (1971) Structure of beta-D-(1->4')xylan hydrate. Nature 232, 46-47 Cross Ref Pub Med
31. Dupree, R., Simmons, T.J., Mortimer, J.C., Patel, D., Iuga, D., Brown, S.P. and Dupree, P. (2015) Probing the molecular architecture of Arabidopsis thaliana secondary cell walls using two- and three-dimensional (13)C solid state nuclear magnetic resonance spectroscopy. Biochemistry 54, 2335-2345 Cross Ref Pub Med
32. Preston, R.D. (1979) Polysaccharide conformation and cell-wall function. Ann. Rev. Plant Phys. 30, 55-78 Cross Ref