Smart cup: A minimally-instrumented, smartphone-based point-of-care molecular diagnostic device

Sensors and Actuators, B: Chemical

Volumn 229, Issue , 2016, Pages 232-238

  Liao, Shih Chuan ^a,c   Peng, Jing ^a   Mauk, Michael G ^a   Awasthi, Sita ^b   Song, Jinzhao ^a   Friedman, Harvey ^b   Bau, Haim H ^a   Liu, Changchun ^a  

^a UNIVERSITY OF PENNSYLVANIA   (United States)

^b UNIVERSITY OF PENNSYLVANIA   (United States)

^c NATIONAL PINGTUNG UNIVERSITY OF SCIENCE AND TECHNOLOGY   (Taiwan)

Author keywords

Chemical heating; HSV 2 virus detection; Loop mediated isothermal amplification; Microfluidics; Smartphone

Indexed keywords

CHEMICAL DETECTION; DIAGNOSIS; DISEASES; FLUORESCENCE; ISOTHERMS; MICROFLUIDICS; NUCLEIC ACIDS; PHASE CHANGE MATERIALS; SIGNAL ENCODING; SMARTPHONES; VIRUSES;

CONSTANT TEMPERATURE; EXOTHERMIC CHEMICAL REACTION; FLUORESCENCE EMISSION; HERPES SIMPLEX VIRUS TYPE-2; ISOTHERMAL AMPLIFICATIONS; LOOP MEDIATED ISOTHERMAL AMPLIFICATIONS; MOLECULAR DIAGNOSTICS; VIRUS DETECTION;

AMPLIFICATION;

EID: 84957595418     PISSN: 09254005     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.snb.2016.01.073     Document Type: Article

References (46)

1. R.W. Hart, M.G. Mauk, C. Liu, X. Qiu, J.A. Thompson, D. Chen, D. Malamud, W.R. Abrams, and H.H. Bau Point-of-care oral-based diagnostics Oral Dis. 17 2011 745 752
2. A. Niemz, T.M. Ferguson, and D.S. Boyle Point-of-care nucleic acid testing for infectious diseases Trends Biotechnol. 29 2011 240 250
3. P. Yager, T. Edwards, E. Fu, K. Helton, K. Nelson, M.R. Tam, and B.H. Weigl Microfluidic diagnostic technologies for global public health Nature 442 2006 412 418
4. N.P. Pai, C. Vadnais, C. Denkinger, N. Engel, and M. Pai Point-of-care testing for infectious diseases: diversity, complexity, and barriers in low- and middle-income countries PLoS Med. 9 2012 e1001306
5. C. Liu, X. Qiu, S. Ongagna, D. Chen, Z. Chen, W.R. Abrams, D. Malamud, P.L.A.M. Corstjens, and H.H. Bau A timer-actuated immunoassay cassette for detecting molecular markers in oral fluids Lab Chip 9 2009 768 776
6. R.J. O'Connell, T.M. Merritt, J.A. Malia, T.C. VanCott, M.J. Dolan, H. Zahwa, W.P. Bradley, B.M. Branson, N.L. Michael, and C.C. De Witt Performance of the oraquick rapid antibody test for diagnosis of human immunodeficiency virus type 1 infection in patients with various levels of exposure to highly active antiretroviral therapy J. Clin. Microbiol. 41 2003 2153 2155
7. S.D. Lawn, K. Dheda, A.D. Kerkhoff, J.G. Peter, S. Dorman, C.C. Boehme, and M.P. Nicol Determine TB-LAM lateral flow urine antigen assay for HIV-associated tuberculosis: recommendations on the design and reporting of clinical studies BMC Infect. Dis. 13 2013 407
8. R. Wong The effect of adulterants on urine screen for drugs of abuse: detection by an on-site dipstick device Am. Clin. Lab. 21 2002 37 39
9. G.A. Posthuma-Trumpie, J. Korf, and A. van Amerongen Lateral flow (immuno) assay: its strengths, weaknesses, opportunities and threats. A literature survey Anal. Bioanal. Chem. 393 2009 569 582
10. S.A. Fiscus, B. Cheng, S.M. Crowe, L. Demeter, C. Jennings, V. Miller, R. Respess, and W. Stevens Forum for collaborative HIV research alternative viral load assay working group, HIV-1 viral load assays for resource-limited settings PLoS Med. 3 2006 e417
11. J. Wang, Z. Chen, P.L. Corstjens, M.G. Mauk, and H.H. Bau A disposable microfluidic cassette for DNA amplification and detection Lab Chip 6 2006 46 53
12. D. Chen, M. Mauk, X. Qiu, C. Liu, J. Kim, S. Ramprasad, S. Ongagna, W.R. Abrams, D. Malamud, P.L.A.M. Corstjens, and H.H. Bau An integrated, self-contained microfluidic cassette for isolation, amplification, and detection of nucleic acids Biomed. Microdevices 12 2010 705 719
13. X. Qiu, J.A. Thompson, Z. Chen, C. Liu, D. Chen, S. Ramprasad, M.G. Mauk, S. Ongagna, C. Barber, W.R. Abrams, D. Malamud, P.L.A.M. Corstjens, and H.H. Bau Finger-actuated, self-contained immunoassay cassettes Biomed. Microdevices 11 2009 1175 1186
14. C.J. Easley, J.M. Karlinsey, J.M. Bienvenue, L.A. Legendre, M.G. Roper, S.H. Feldman, M.A. Hughes, E.L. Hewlett, T.J. Merkel, J.P. Ferrance, and J.P. Landers A fully integrated microfluidic genetic analysis system with sample-in-answer-out capability Proc. Natl. Acad. Sci. 103 2006 19272 19277
15. H. Zhu, S. Mavandadi, A.F. Coskun, O. Yaglidere, and A. Ozcan Optofluidic fluorescent imaging cytometry on a cell phone Anal. Chem. 83 2011 6641 6647
16. O. Mudanyali, S. Dimitrov, U. Sikora, S. Padmanabhan, I. Navruz, and A. Ozcan Integrated rapid-diagnostic-test reader platform on a cellphone Lab Chip 12 2012 2678 2686
17. L. Shen, J.A. Hagen, and I. Papautsky Point-of-care colorimetric detection with a smartphone Lab Chip 12 2012 4240 4243
18. A.K. Hall, H. Cole-Lewis, and J.M. Bernhardt Mobile text messaging for health: a systematic review of reviews Annu. Rev. Public Health 36 2015 393
19. T. Notomi, H. Okayama, H. Masubuchi, T. Yonekawa, K. Watanabe, N. Amino, and T. Hase Loop-mediated isothermal amplification of DNA Nucl. Acids Res. 28 2000 e63
20. S. Lutz, P. Weber, M. Focke, B. Faltin, J. Hoffmann, C. Müller, D. Mark, G. Roth, P. Munday, N. Armes, O. Piepenburg, R. Zengerleabe, and F. Stetten Microfluidic lab-on-a-foil for nucleic acid analysis based on isothermal recombinase polymerase amplification (RPA) Lab Chip 10 2010 887 893
21. I.K. Dimov, J.L. Garcia-Cordero, J. O'Grady, C.R. Poulsen, C. Viguier, L. Kent, P. Daly, B. Lincoln, M. Maher, R. O'Kennedy, T.J. Smith, A.J. Ricco, and L.P. Lee Integrated microfluidic tmRNA purification and real-time NASBA device for molecular diagnostics Lab Chip 8 2008 2071 2078
22. P.M. Lizardi, X. Huang, Z. Zhu, P. Bray-Ward, D.C. Thomas, and D.C. Ward Mutation detection and single-molecule counting using isothermal rolling-circle amplification Nat. Genet. 19 1998 225 232
23. P.J. Asiello, and A.J. Baeumner Miniaturized isothermal nucleic acid amplification, a review Lab Chip 11 2011 1420 1430
24. B. Weigl, G. Domingo, P. LaBarre, and J. Gerlach Towards non-and minimally instrumented, microfluidics-based diagnostic devices Lab Chip 8 2008 1999 2014
25. K.A. Curtis, D.L. Rudolph, I. Nejad, J. Singleton, A. Beddoe, B. Weigl, P. LaBarre, and S.M. Owen Isothermal amplification using a chemical heating device for point-of-care detection of HIV-1 PLoS One 7 2012 e31432
26. R. Kubota, P. Labarre, B.H. Weigl, Y. Li, P. Haydock, and D.M. Jenkins Molecular diagnostics in a teacup: non-instrumented nucleic acid amplification (NINA) for rapid low cost detection of Salmonella enterica Chin. Sci. Bull. 58 2013 1162 1168
27. C. Liu, M.G. Mauk, R. Hart, X. Qiu, and H.H. Bau A self-heating cartridge for molecular diagnostics Lab Chip 11 2011 2686 2692
28. J. Singleton, J.L. Osborn, L. Lillis, K. Hawkins, D. Guelig, W. Price, R. Johns, K. Ebels, D. Boyle, B. Weigl, and P. LaBarre Electricity-free amplification and detection for molecular point-of-care diagnosis of HIV-1 PLoS One 9 2014 e113693
29. J. Singleton, C. Zentner, J. Buser, P. Yager, P. LaBarre, and B.H. Weigl Instrument-free exothermic heating with phase change temperature control for paper microfluidic devices Proc. SPIE 8615 2013 86150R-1-14
30. C. Liu, E. Geva, M. Mauk, X. Qiu, W.R. Abrams, D. Malamud, K. Curtis, S.M. Owen, and H.H. Bau An isothermal amplification reactor with an integrated isolation membrane for point-of-care detection of infectious diseases Analyst 136 2011 2069 2076
31. C. Liu, M. Mauk, R. Gross, F.D. Bushman, P.H. Edelstein, R.G. Collman, and H.H. Bau Membrane-based, sedimentation-assisted plasma separator for point-of-care applications Anal. Chem. 85 2013 10463 10470
32. S. Awasthi, J.W. Balliet, J.A. Flynn, J.M. Lubinski, C.E. Shaw, D.J. DiStefano, M. Caia, M. Brown, J.F. Smith, R. Kowalski, R. Swoyer, J. Galli, V. Copeland, S. Rios, R.C. Davidson, M. Salnikova, S. Kingsley, J. Bryan, D.R. Casimiro, and H.M. Friedman Protection provided by a herpes simplex virus 2 (HSV-2) glycoprotein C and D subunit antigen vaccine against genital HSV-2 infection in HSV-1-seropositive guinea pigs J. Virol. 88 2014 2000 2010
33. H. Kaneko, T. Iida, K. Aoki, S. Ohno, and T. Suzutani Sensitive and rapid detection of herpes simplex virus and varicella-zoster virus DNA by loop-mediated isothermal amplification J. Clin. Microbiol. 43 2005 3290 3296
34. B. Hatano, T. Maki, T. Obara, H. Fukumoto, K. Hagisawa, Y. Matsushita, A. Okutani, B. Bazartseren, S. Inoue, T. Sata, and H. Katano LAMP using a disposable pocket warmer for anthrax detection, a highly mobile and reliable method for anti-bioterrorism Jpn. J. Infect. Dis. 63 2010 36 40
35. J. Kim, D. Byun, M.G. Mauk, and H.H. Bau A disposable, self-contained PCR chip Lab Chip 9 2009 606 612
36. C. Liu, M.G. Mauk, R. Hart, M. Bonizzoni, G. Yan, and H.H. Bau A low-cost microfluidic chip for rapid genotyping of malaria-transmitting mosquitoes PLoS One 7 2012 e42222
37. X. Zhang, M. Liao, P. Jiao, K. Luo, H. Zhang, T. Ren, G. Zhang, C. Xu, C. Xin, and W. Cao Development of a loop-mediated isothermal amplification assay for rapid detection of subgroup J avian leukosis virus J. Clin. Microbiol. 48 2010 2116 2121
38. S. Awasthi, and H.M. Friedman Status of prophylactic and therapeutic genital herpes vaccines Curr. Opin. Virol. 6 2014 6 12
39. K.J. Looker, G.P. Garnett, and G.P. Schmid An estimate of the global prevalence and incidence of herpes simplex virus type 2 infection Bull. World Health Organ. 86 2008 805 812A
40. F. Xu, M.R. Sternberg, B.J. Kottiri, G.M. McQuillan, F.K. Lee, A.J. Nahmias, S.M. Berman, and L.E. Markowitz Trends in herpes simplex virus type 1 and type 2 seroprevalence in the United States JAMA 296 2006 964 973
41. L. Corey, and A. Wald Maternal and neonatal herpes simplex virus infections N. Engl. J. Med. 361 2009 1376 1385
42. J. Compton Nucleic acid sequence-based amplification Nature 350 1991 91 92
43. G.T. Walker, M.S. Fraiser, J.L. Schram, M.C. Little, J.G. Nadeau, and D.P. Malinowski Strand displacement amplification-an isothermal, in vitro DNA amplification technique Nucl. Acids Res. 20 1992 1691 1696
44. J.C. Guatelli, K.M. Whitfield, D.Y. Kwoh, K.J. Barringer, D.D. Richman, and T.R. Gingeras Isothermal, in vitro amplification of nucleic acids by a multienzyme reaction modeled after retroviral replication Proc. Natl. Acad. Sci. U. S. A. 87 1990 1874 1878
45. A. Fire, and S.Q. Xu Rolling replication of short DNA circles Proc. Natl. Acad. Sci. U. S. A. 92 1995 4641 4645
46. E.I. Laderman, E. Whitworth, E. Dumaual, M. Jones, A. Hudak, W. Hogrefe, J. Carney, and J. Groen Rapid, sensitive, and specific lateral-flow immunochromatographic point-of-care device for detection of herpes simplex virus type 2-specific immunoglobulin G antibodies in serum and whole blood Clin. Vacc. Immunol. 15 2008 159 163