Evaluation of MPI's one-sided communication mechanism for short-range molecular dynamics on the origin2000

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 1947, Issue , 2001, Pages 356-365

  Matthey, T ^a   Hansen, J P ^a  

^a UNIVERSITY OF BERGEN   (Norway)

Author keywords

[No Author keywords available]

Indexed keywords

MOLECULAR DYNAMICS;

COMPUTATION TIME; MOLECULAR DYNAMICS SIMULATIONS; MULTICELL; ONE SIDED COMMUNICATION; PRODUCTION RUN; TIME INTEGRATION;

MESSAGE PASSING;

EID: 84957007848     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/3-540-70734-4     Document Type: Conference Paper

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3. D.M. Beazley, P.S. Lomdahl, Message-Passing Multi-Cell Molecular Dynamics on the Connection Machine 5, Theoretical Division and Advanced Computing Labora- tory Los Alamos National Laboratory, Las Alamos, New Mexico 87545, (1993).
4. P.S. Lomdahl, P. Tamayo, N. Grøbech-Jensen, and D.M. Beazley, 50 GFLops Mole- cular Dynamics on the Connection Machine 5, Theoretical Division and Advanced Computing Laboratory Los Alamos National Laboratory, Las Alamos, New Mexico 87545, (1993).
5. RS. J. Zhou, D. L. Preston, P. S. Lomdahl and D. M. Beazley, SCIENCE, 279, 1525 (1998)
6. MPI-2: Extensions to the Message-Passing Interface, http://www.mpi-forum.org/docs/docs.html.
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8. METIS - Family of Multilevel Partitioning Algorithms, http://www-users.cs.umn.edu/~karypis/metis/metis.html.