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Volumn 129, Issue 2, 2016, Pages 273-287

Multiple-trait- and selection indices-genomic predictions for grain yield and protein content in rye for feeding purposes

Author keywords

[No Author keywords available]

Indexed keywords

GENES; PROTEINS;

EID: 84956597903     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-015-2626-6     Document Type: Article
Times cited : (83)

References (56)
  • 2
    • 84929492767 scopus 로고    scopus 로고
    • Association mapping and genomic prediction for resistance to sudden death syndrome in early maturing soybean germplasm
    • PID: 259997
    • Bao Y, Kurle JE, Anderson G, Yong ND (2015) Association mapping and genomic prediction for resistance to sudden death syndrome in early maturing soybean germplasm. Mol Breed 35:128
    • (2015) Mol Breed , vol.35 , pp. 128
    • Bao, Y.1    Kurle, J.E.2    Anderson, G.3    Yong, N.D.4
  • 3
    • 37349070327 scopus 로고    scopus 로고
    • Multiple-trait breeding values for parental selection in self-pollinating crops
    • PID: 17955207, COI: 1:STN:280:DC%2BD2sjlsVajsw%3D%
    • Bauer A, Léon J (2008) Multiple-trait breeding values for parental selection in self-pollinating crops. Theor Appl Genet 116:235–242
    • (2008) Theor Appl Genet , vol.116 , pp. 235-242
    • Bauer, A.1    Léon, J.2
  • 6
    • 80455127261 scopus 로고    scopus 로고
    • Accuracy of multi-trait genomic selection using different methods
    • PID: 217292
    • Calus MPL, Veerkamp RF (2011) Accuracy of multi-trait genomic selection using different methods. Genet Sel Evol 43:26
    • (2011) Genet Sel Evol , vol.43 , pp. 26
    • Calus, M.P.L.1    Veerkamp, R.F.2
  • 8
    • 84863723583 scopus 로고    scopus 로고
    • Single-step methods for genomic evaluation in pigs
    • PID: 22717310, COI: 1:CAS:528:DC%2BC38Xht1Gis7
    • Christensen OF, Madsen P, Nielsen B, Ostersen T, Su G (2012) Single-step methods for genomic evaluation in pigs. Animal 6:1565–1571
    • (2012) Animal , vol.6 , pp. 1565-1571
    • Christensen, O.F.1    Madsen, P.2    Nielsen, B.3    Ostersen, T.4    Su, G.5
  • 10
    • 36849039475 scopus 로고    scopus 로고
    • Prediction of response to marker-assisted and genomic selection using selection index theory
    • PID: 18076470, COI: 1:STN:280:DC%2BD2sjjvFyiuw%3D%
    • Dekkers JCM (2007) Prediction of response to marker-assisted and genomic selection using selection index theory. J Anim Breed Genet 124:331–341
    • (2007) J Anim Breed Genet , vol.124 , pp. 331-341
    • Dekkers, J.C.M.1
  • 11
    • 0030450630 scopus 로고    scopus 로고
    • Multiple trait selection in a recurrent selection population in oat (Avena sativa L.)
    • Dolan DJ, Stuthman DD, Kolb FL, Hewings AD (1996) Multiple trait selection in a recurrent selection population in oat (Avena sativa L.). Crop Sci 36:1207–1211
    • (1996) Crop Sci , vol.36 , pp. 1207-1211
    • Dolan, D.J.1    Stuthman, D.D.2    Kolb, F.L.3    Hewings, A.D.4
  • 12
    • 6844248027 scopus 로고
    • Expected and actual gains in economic value of oat lines from five selection methods
    • Eagles HA, Frey KJ (1974) Expected and actual gains in economic value of oat lines from five selection methods. Crop Sci 14:861–864
    • (1974) Crop Sci , vol.14 , pp. 861-864
    • Eagles, H.A.1    Frey, K.J.2
  • 13
    • 3043003062 scopus 로고
    • Comparison of four methods of multiple trait selection for five traits in alfalfa
    • Elgin JH, Hill RR, Zeiders KE (1970) Comparison of four methods of multiple trait selection for five traits in alfalfa. Crop Sci 10:190–193
    • (1970) Crop Sci , vol.10 , pp. 190-193
    • Elgin, J.H.1    Hill, R.R.2    Zeiders, K.E.3
  • 16
    • 84897571691 scopus 로고    scopus 로고
    • Comparison of single-trait and multiple-trait genomic prediction models
    • PID: 245932
    • Guo G, Zhao F, Wang Y, Zhang Y, Du L, Su G (2014) Comparison of single-trait and multiple-trait genomic prediction models. BMC Genet 15:30
    • (2014) BMC Genet , vol.15 , pp. 30
    • Guo, G.1    Zhao, F.2    Wang, Y.3    Zhang, Y.4    Du, L.5    Su, G.6
  • 17
    • 84873026802 scopus 로고    scopus 로고
    • A Bayesian method and its variational approximation for prediction of genomic breeding values in multiple traits
    • PID: 233632
    • Hayashi T, Iwata H (2013) A Bayesian method and its variational approximation for prediction of genomic breeding values in multiple traits. BMC Bioinformatics 14:34
    • (2013) BMC Bioinformatics , vol.14 , pp. 34
    • Hayashi, T.1    Iwata, H.2
  • 18
    • 0001724911 scopus 로고
    • The genetic basis for constructing selection indexes
    • PID: 17247099, COI: 1:STN:280:DC%2BD2s%2FmsFSktw%3D%
    • Hazel LN (1943) The genetic basis for constructing selection indexes. Genetics 28:476–490
    • (1943) Genetics , vol.28 , pp. 476-490
    • Hazel, L.N.1
  • 19
    • 0000396962 scopus 로고
    • The efficiency of three methods of selection
    • Hazel LN, Lush JL (1942) The efficiency of three methods of selection. J Hered 33:393–399
    • (1942) J Hered , vol.33 , pp. 393-399
    • Hazel, L.N.1    Lush, J.L.2
  • 20
    • 80053633450 scopus 로고    scopus 로고
    • Genomic selection accuracy for grain quality traits in biparental wheat populations
    • Heffner EL, Jannink JL, Iwata H, Souza E, Sorrells ME (2011) Genomic selection accuracy for grain quality traits in biparental wheat populations. Crop Sci 51:2597–2606
    • (2011) Crop Sci , vol.51 , pp. 2597-2606
    • Heffner, E.L.1    Jannink, J.L.2    Iwata, H.3    Souza, E.4    Sorrells, M.E.5
  • 21
    • 0016704147 scopus 로고
    • Best linear unbiased estimation and prediction under a selection model
    • PID: 1174616, COI: 1:STN:280:DyaE28%2FhvFegsA%3D%
    • Henderson CR (1975) Best linear unbiased estimation and prediction under a selection model. Biometrics 31:423–447
    • (1975) Biometrics , vol.31 , pp. 423-447
    • Henderson, C.R.1
  • 22
    • 0000676751 scopus 로고
    • Multiple trait evaluation using relatives’ records
    • Henderson CR, Quass RL (1976) Multiple trait evaluation using relatives’ records. J Anim Sci 43:1188–1197
    • (1976) J Anim Sci , vol.43 , pp. 1188-1197
    • Henderson, C.R.1    Quass, R.L.2
  • 23
    • 82955176938 scopus 로고    scopus 로고
    • Genomic selection in plant breeding: a comparison of models
    • Heslot N, Yang HP, Sorrells ME, Jannink JL (2012) Genomic selection in plant breeding: a comparison of models. Crop Sci 52:146–160
    • (2012) Crop Sci , vol.52 , pp. 146-160
    • Heslot, N.1    Yang, H.P.2    Sorrells, M.E.3    Jannink, J.L.4
  • 24
    • 84869083925 scopus 로고    scopus 로고
    • Genome-based prediction of test cross performance in two subsequent breeding cycles
    • PID: 228147
    • Hofheinz N, Borchardt D, Weissleder K, Frisch M (2012) Genome-based prediction of test cross performance in two subsequent breeding cycles. Theor Appl Genet 125:1639–1645
    • (2012) Theor Appl Genet , vol.125 , pp. 1639-1645
    • Hofheinz, N.1    Borchardt, D.2    Weissleder, K.3    Frisch, M.4
  • 25
    • 0009721301 scopus 로고
    • Evaluation of recurrent restricted index selection for increasing yield while holding seed protein constant in soybean
    • Holbrook CC, Burton JW, Carter TE (1989) Evaluation of recurrent restricted index selection for increasing yield while holding seed protein constant in soybean. Crop Sci 29:324–329
    • (1989) Crop Sci , vol.29 , pp. 324-329
    • Holbrook, C.C.1    Burton, J.W.2    Carter, T.E.3
  • 28
    • 84870707772 scopus 로고    scopus 로고
    • Multiple-trait genomic selection methods increase genetic value prediction accuracy
    • PID: 230862
    • Jia Y, Jannink JL (2012) Multiple-trait genomic selection methods increase genetic value prediction accuracy. Genetics 192:1513–1522
    • (2012) Genetics , vol.192 , pp. 1513-1522
    • Jia, Y.1    Jannink, J.L.2
  • 29
  • 30
    • 43049164092 scopus 로고    scopus 로고
    • Effects of variety and fertiliser nitrogen on alcohol yield, grain yield, starch and protein content, and protein composition of winter wheat
    • COI: 1:CAS:528:DC%2BD1cXlslyitbs%
    • Kindred DR, Verhoeven TMO, Weightman RM, Swanston JS, Agu RC, Brosnan JM, Sylvester-Bradley R (2008) Effects of variety and fertiliser nitrogen on alcohol yield, grain yield, starch and protein content, and protein composition of winter wheat. J Cereal Sci 48:46–57
    • (2008) J Cereal Sci , vol.48 , pp. 46-57
    • Kindred, D.R.1    Verhoeven, T.M.O.2    Weightman, R.M.3    Swanston, J.S.4    Agu, R.C.5    Brosnan, J.M.6    Sylvester-Bradley, R.7
  • 31
    • 0007357220 scopus 로고
    • Heritability of a linear combination of traits
    • PID: 24317530, COI: 1:STN:280:DC%2BC2c3nsVCltQ%3D%
    • Lin C, Allaire F (1977) Heritability of a linear combination of traits. Theor Appl Genet 51:1–3
    • (1977) Theor Appl Genet , vol.51 , pp. 1-3
    • Lin, C.1    Allaire, F.2
  • 32
    • 84913595028 scopus 로고    scopus 로고
    • Genomic selection for the improvement of antibody response to newcastle disease and avian influenza virus in chickens
    • Liu T, Qu H, Luo C, Li X, Shu D, Lund MS, Su G (2014) Genomic selection for the improvement of antibody response to newcastle disease and avian influenza virus in chickens. PLoS One. doi:10.1371/journal.pone.0112685
    • (2014) PLoS One
    • Liu, T.1    Qu, H.2    Luo, C.3    Li, X.4    Shu, D.5    Lund, M.S.6    Su, G.7
  • 33
    • 84930872528 scopus 로고    scopus 로고
    • Genomic selection in wheat: optimum allocation of test resources and comparison of breeding strategies for line and hybrid breeding
    • PID: 258775
    • Longin CFH, Mi X, Würschum T (2015) Genomic selection in wheat: optimum allocation of test resources and comparison of breeding strategies for line and hybrid breeding. Theor Appl Genet 128:1297–1306
    • (2015) Theor Appl Genet , vol.128 , pp. 1297-1306
    • Longin, C.F.H.1    Mi, X.2    Würschum, T.3
  • 34
    • 77949826087 scopus 로고    scopus 로고
    • Accuracy of breeding values of ‘unrelated’ individuals predicted by dense SNP genotyping
    • PID: 195198
    • Meuwissen THE (2009) Accuracy of breeding values of ‘unrelated’ individuals predicted by dense SNP genotyping. Genet Sel Evol 41:35
    • (2009) Genet Sel Evol , vol.41 , pp. 35
    • Meuwissen, T.H.E.1
  • 35
    • 0035045051 scopus 로고    scopus 로고
    • Prediction of total genetic value using genome-wide dense marker maps
    • PID: 11290733, COI: 1:CAS:528:DC%2BD3MXjsFemtbY%
    • Meuwissen THE, Hayes BJ, Goddard ME (2001) Prediction of total genetic value using genome-wide dense marker maps. Genetics 157:1819–1829
    • (2001) Genetics , vol.157 , pp. 1819-1829
    • Meuwissen, T.H.E.1    Hayes, B.J.2    Goddard, M.E.3
  • 36
    • 84871014976 scopus 로고    scopus 로고
    • Genetic architecture of complex agronomic traits examined in two testcross populations of rye (Secale cereale L.)
    • PID: 23244545, COI: 1:CAS:528:DC%2BC3sXjsVamtbo%
    • Miedaner T, Hübner M, Korzun V, Schmiedchen B, Bauer E, Haseneyer G, Wilde P, Reif JC (2012) Genetic architecture of complex agronomic traits examined in two testcross populations of rye (Secale cereale L.). BMC Genomics 13:706
    • (2012) BMC Genomics , vol.13 , pp. 706
    • Miedaner, T.1    Hübner, M.2    Korzun, V.3    Schmiedchen, B.4    Bauer, E.5    Haseneyer, G.6    Wilde, P.7    Reif, J.C.8
  • 37
    • 0342787628 scopus 로고
    • Selection indexes to modify protein concentration of soybean seeds
    • COI: 1:CAS:528:DyaL2cXitVKlsLo%
    • Openshaw SJ, Hadley HH (1984) Selection indexes to modify protein concentration of soybean seeds. Crop Sci 24:1–4
    • (1984) Crop Sci , vol.24 , pp. 1-4
    • Openshaw, S.J.1    Hadley, H.H.2
  • 38
    • 0029795948 scopus 로고    scopus 로고
    • Effects of late nitrogen fertilizer application on head rice yield, protein content, and grain quality of rice
    • COI: 1:CAS:528:DyaK28Xmt12ltLw%
    • Perez C, Juliano BO, Liboon SP, Alcantara JM, Cassman KG (1996) Effects of late nitrogen fertilizer application on head rice yield, protein content, and grain quality of rice. Cereal Chem 73:556–560
    • (1996) Cereal Chem , vol.73 , pp. 556-560
    • Perez, C.1    Juliano, B.O.2    Liboon, S.P.3    Alcantara, J.M.4    Cassman, K.G.5
  • 39
    • 37249082900 scopus 로고    scopus 로고
    • Computing heritability and selection response from unbalanced plant breeding trials
    • PID: 180398
    • Piepho HP, Möhring J (2007) Computing heritability and selection response from unbalanced plant breeding trials. Genetics 177:1881–1888
    • (2007) Genetics , vol.177 , pp. 1881-1888
    • Piepho, H.P.1    Möhring, J.2
  • 40
    • 84886485029 scopus 로고    scopus 로고
    • Preliminary evaluation of grain yield components in hexaploid tritordeum
    • Pinto RJB, Alvarez JB, Martínet LM (2002) Preliminary evaluation of grain yield components in hexaploid tritordeum. Crop Breed Appl Biotechnol 2:213–218
    • (2002) Crop Breed Appl Biotechnol , vol.2 , pp. 213-218
    • Pinto, R.J.B.1    Alvarez, J.B.2    Martínet, L.M.3
  • 41
    • 84863304598 scopus 로고    scopus 로고
    • R Foundation for Statistical Computing, Vienna, Austr
    • R Core Team (2014) R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0. http://www.R-project.org
    • (2014) R: A language and environment for statistical computing
  • 42
    • 26944465372 scopus 로고    scopus 로고
    • Trends in genetic diversity among European maize cultivars and their parental components during the past 50 years
    • PID: 160345
    • Reif JC, Hamrit S, Heckenberger M, Schipprack W, Maurer HP, Bohn M, Melchinger AE (2005) Trends in genetic diversity among European maize cultivars and their parental components during the past 50 years. Theor Appl Genet 111:838–845
    • (2005) Theor Appl Genet , vol.111 , pp. 838-845
    • Reif, J.C.1    Hamrit, S.2    Heckenberger, M.3    Schipprack, W.4    Maurer, H.P.5    Bohn, M.6    Melchinger, A.E.7
  • 43
    • 84878558210 scopus 로고    scopus 로고
    • Evaluation of genomic prediction methods for Fusarium head blight resistance in wheat
    • COI: 1:CAS:528:DC%2BC38Xht1Ggu7%2
    • Rutkoski J, Benson J, Jia Y, Brown-Guedira G, Jannink JL, Sorrells ME (2012) Evaluation of genomic prediction methods for Fusarium head blight resistance in wheat. Plant Genome 5:51–61
    • (2012) Plant Genome , vol.5 , pp. 51-61
    • Rutkoski, J.1    Benson, J.2    Jia, Y.3    Brown-Guedira, G.4    Jannink, J.L.5    Sorrells, M.E.6
  • 45
    • 84879961576 scopus 로고    scopus 로고
    • Genomic selection of seed weight based on low-density SCAR markers in soybean
    • PID: 23884761, COI: 1:CAS:528:DC%2BC3sXht1Cmsr
    • Shu Y, Yu D, Wang D, Bai X, Zhu Y, Guo C (2013) Genomic selection of seed weight based on low-density SCAR markers in soybean. Genet Mol Res 12:2178–2188
    • (2013) Genet Mol Res , vol.12 , pp. 2178-2188
    • Shu, Y.1    Yu, D.2    Wang, D.3    Bai, X.4    Zhu, Y.5    Guo, C.6
  • 46
    • 0000109385 scopus 로고
    • A discriminant function for plant selection
    • Smith HF (1936) A discriminant function for plant selection. Ann Eugen 7:240–250
    • (1936) Ann Eugen , vol.7 , pp. 240-250
    • Smith, H.F.1
  • 47
    • 54449086841 scopus 로고    scopus 로고
    • Genomic selection using different marker types and densities
    • PID: 18407980, COI: 1:CAS:528:DC%2BD1cXht1ams7
    • Solberg TR, Sonesson AK, Woolliams JA, Meuwissen T (2008) Genomic selection using different marker types and densities. J Anim Sci 86:2447–2454
    • (2008) J Anim Sci , vol.86 , pp. 2447-2454
    • Solberg, T.R.1    Sonesson, A.K.2    Woolliams, J.A.3    Meuwissen, T.4
  • 48
    • 84924428504 scopus 로고    scopus 로고
    • Genomic selection and association mapping in rice (Oryza sativa): effect of trait genetic architecture, training population composition, marker number and statistical model on accuracy of rice genomic selection in elite, tropical rice breeding lines
    • Spindel J, Begum H, Akdemir D, Virk P, Collard B, Redoña E, Atlin G, Jannink JL, McCouch SR (2015) Genomic selection and association mapping in rice (Oryza sativa): effect of trait genetic architecture, training population composition, marker number and statistical model on accuracy of rice genomic selection in elite, tropical rice breeding lines. PLoS Genet. doi:10.1371/journal.pgen.1004982
    • (2015) PLoS Genet
    • Spindel, J.1    Begum, H.2    Akdemir, D.3    Virk, P.4    Collard, B.5    Redoña, E.6    Atlin, G.7    Jannink, J.L.8    McCouch, S.R.9
  • 50
    • 79960637076 scopus 로고    scopus 로고
    • Multiple-trait genomic evaluation of linear type traits using genomic and phenotypic data in US Holsteins
    • PID: 21787955, COI: 1:CAS:528:DC%2BC3MXpsVylu7k%
    • Tsuruta S, Misztal I, Aguilar I, Lawlor TJ (2011) Multiple-trait genomic evaluation of linear type traits using genomic and phenotypic data in US Holsteins. J Dairy Sci 94:4198–4204
    • (2011) J Dairy Sci , vol.94 , pp. 4198-4204
    • Tsuruta, S.1    Misztal, I.2    Aguilar, I.3    Lawlor, T.J.4
  • 51
    • 84921409258 scopus 로고    scopus 로고
    • The accuracy of prediction of genomic selection in elite hybrid rye populations surpasses the accuracy of marker-assisted selection and is equally augmented by multiple field evaluation locations and test years
    • PID: 249971
    • Wang Y, Mette MF, Miedaner T, Gottwald M, Wilde P, Reif JC, Zhao Y (2014) The accuracy of prediction of genomic selection in elite hybrid rye populations surpasses the accuracy of marker-assisted selection and is equally augmented by multiple field evaluation locations and test years. BMC Genomics 15:556
    • (2014) BMC Genomics , vol.15 , pp. 556
    • Wang, Y.1    Mette, M.F.2    Miedaner, T.3    Gottwald, M.4    Wilde, P.5    Reif, J.C.6    Zhao, Y.7
  • 52
    • 84940703695 scopus 로고    scopus 로고
    • First insights into the genotype–phenotype map of phenotypic stability in rye
    • PID: 25873667, COI: 1:CAS:528:DC%2BC2MXitVCqu7
    • Wang Y, Mette MF, Miedaner T, Wilde P, Reif JC, Zhao Y (2015) First insights into the genotype–phenotype map of phenotypic stability in rye. J Exp Bot 66:3275–3284
    • (2015) J Exp Bot , vol.66 , pp. 3275-3284
    • Wang, Y.1    Mette, M.F.2    Miedaner, T.3    Wilde, P.4    Reif, J.C.5    Zhao, Y.6
  • 53
    • 0000920134 scopus 로고
    • The evaluation of a selection index
    • Williams JS (1962) The evaluation of a selection index. Biometrics 18:375–393
    • (1962) Biometrics , vol.18 , pp. 375-393
    • Williams, J.S.1
  • 55
    • 84956692437 scopus 로고    scopus 로고
    • Yielding ability of winter triticale in a heavy snow area of central Hokkaido
    • Yoshira T, Karasawa T, Nakatsuka K (2000) Yielding ability of winter triticale in a heavy snow area of central Hokkaido. Crop Breed Appl Biotechnol 2:213–218
    • (2000) Crop Breed Appl Biotechnol , vol.2 , pp. 213-218
    • Yoshira, T.1    Karasawa, T.2    Nakatsuka, K.3


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