Evaluation of fire recurrence effect on genetic diversity in maritime pine (Pinus pinaster Ait.) stands using Inter-Simple Sequence Repeat profiles

Science of the Total Environment

Volumn 572, Issue , 2016, Pages 1322-1328

  Lucas Borja, M E ^a   Ahrazem, O ^a   Candel Perez D ^a   Moya, D ^a   Fonseca, T ^b   Hernandez Tecles E ^a   De las Heras, J ^a   Gomez Gomez L ^a  

^a UNIVERSITY OF CASTILLA LA MANCHA   (Spain)

^b UNIVERSITY OF TRÁS OS MONTES AND ALTO DOURO   (Portugal)

Author keywords

Forest fire recurrence; Genetic diversity; ISSR; Maritime pine; Postfire natural regeneration

Indexed keywords

BIODIVERSITY; DEFORESTATION; REFORESTATION;

FOREST FIRES; GENETIC DIVERSITY; ISSR; MARITIME PINES; NATURAL REGENERATION;

FIRES;

CONIFEROUS TREE; DNA; FOREST FIRE; GENETIC ANALYSIS; GENETIC DIFFERENTIATION; POPULATION GENETICS; REGENERATION;

ARTICLE; DNA SEQUENCE; DNA STRUCTURE; FIRE; GENE LOCUS; GENE STRUCTURE; GENETIC EROSION; GENETIC VARIABILITY; HETEROZYGOSITY LOSS; INTER SIMPLE SEQUENCE REPEAT; NONHUMAN; PINE; PINUS PINASTER; PLANT GENETICS; POPULATION STRUCTURE; PORTUGAL; PRIORITY JOURNAL; GENETIC VARIATION; GENETICS;

PORTUGAL;

PINUS PINASTER;

MICROSATELLITE DNA;

FIRES; GENETIC VARIATION; MICROSATELLITE REPEATS; PINUS; PORTUGAL;

EID: 84955566072     PISSN: 00489697     EISSN: 18791026     Source Type: Journal    
DOI: 10.1016/j.scitotenv.2016.01.105     Document Type: Article

References (49)

1. AFN, National forest inventory of mainland Portugal (2005–2006). 2010, Autoridade Florestal Nacional, Lisbon, Portugal (in Portuguese).
2. Agee, J.K., Fire and pine ecosystems. Richardson, D.M., (eds.) Ecology and biogeography of Pinus, 1998, University Press, Cambridge, 193–218.
3. Agroconsultores-Coba, Carta dos solos, do uso actual da terra e da aptidão da terra do nordeste de Portugal. 1991, UTAD/PDRITM, Vila Real.
4. Aguirre-Planter, E., Furnier, G.R., Eguiarte, L.E., Low levels of genetic variation within and high levels of genetic differentiation among populations of species of Abies from southern Mexico and Guatemala. Am. J. Bot. 87 (2000), 362–371.
5. Aitken, S.N., Yeaman, S., Holliday, J.A., Wang, T., Curtis-McLane, S., Adaptation, migration or extirpation: climate change outcomes for tree populations. Evol. Appl. 1 (2008), 95–111.
6. Buchert, G.P., Rajora, O.P., Hood, J.V., Dancik, B.P., Effects of harvesting on genetic diversity in old-growth eastern white pine in Ontario, Canada. Conserv. Biol. 11 (1997), 747–758.
7. Budde, K.B., Heuertz, M., Hernández-Serrano, A., Pausas, J.G., Vendramin, G.G., Verdú, M., González-Martínez, S.C., In situ genetic association for serotiny, a fire-related trait, in Mediterranean maritime pine (Pinus pinaster). New Phytol. 201:1 (2014), 230–241.
8. Dale, V.H., Joyce, L.A., Mcnulty, S., Neilson, R.P., Ayres, M.P., Flannigan, M.D., Hanson, P.J., Irland, L.C., Lugo, A.E., Peterson, C.J., Simberloff, D., Swanson, F.J., Stocks, B.J., Wotton, M., Climate change and forest disturbances. Bioscience 51 (2001), 723–734.
9. De las Heras, J., Moya, D., Vega, J.A., Daskalakou, E., Vallejo, R., Grigoriadis, N., Tsitsoni, T., Baeza, J., Valdecantos, A., Fernández, C., Espelta, J., Fernandes, P., Post-fire management of serotinous pine forests. Moreira, F., Arianotsou, M., Corona, P., De las Heras, J., (eds.) Post-fire management and restoration of southern European forests Manag. For. Ecosyst., 24, 2012, 151–170.
10. Díaz-Delgado, R., Lloret, F., Pons, X., Terradas, J., Satellite evidence of decreasing resilience in Mediterranean plant communities after recurrent wildfires. Ecology 83:8 (2002), 2293–2303.
11. Doblas-Miranda, E., Martínez-Vilalta, J., Lloret, F., Álvarez, A., Ávila, A., Bonet, F.J., Brotons, L., Castro, J., Curiel Yuste, J., Díaz, M., Ferrandis, P., García-Hurtado, E., Iriondo, J.M., Keenan, T.F., Latron, J., Llusià, J., Loepfe, L., Mayol, M., Moré, G., Moya, D., Peñuelas, J., Pons, X., Poyatos, R., Sardans, J., Sus, O., Vallejo, V.R., Vayreda, J., Retana, J., Reassessing global change research priorities in Mediterranean terrestrial ecosystems: how far have we come and where do we go from here?. Glob. Ecol. Biogeogr. 24 (2015), 25–43.
12. Doyle, J.J., Doyle, J.L., A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull 19 (1987), 11–15.
13. Earl, D.A., von Holdt, B.M., STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method. Conserv. Genet. Resour. 4 (2012), 359–361.
14. Evanno, G., Reganut, E., Goudet, J., Detecting the number of clusters of individuals using STRUCTURE: a simulation study. Mol. Ecol. 14 (2005), 2611–2620.
15. Feng, F.J., Han, S.J., Wang, H.M., Genetic diversity and genetic differentiation of natural Pinus koraiensis populations. J. For. Res. 17 (2006), 21–24.
16. Fernandes, P.M., Rigolot, E., The fire ecology and management of maritime pine (Pinus pinaster Ait.). For. Ecol. Manag. 241:1–3 (2007), 1–13.
17. Fernandes, P., Loureiro, C., Botelho, H.S., Fire behaviour and severity in a maritime pine stand under differing fuel conditions. Ann. For. Sci. 61 (2004), 537–544.
18. Fernandes, P.M., Fernandes, M.M., Loureiro, C., Post-fire live residuals of maritime pine plantations in Portugal: structure, burn severity, and fire recurrence. For. Ecol. Manag. 347 (2015), 170–179.
19. Garzón, M.B., Alía, R., Robson, T.M., Zavala, M.A., Intra-specific variability and plasticity influence potential tree species distributions under climate change. Glob. Ecol. Biogeogr. 20:5 (2011), 766–778.
20. Gómez, A., Vendramin, G.G., González-Martínez, S.C., Alía, R., Genetic diversity and differentiation of two Mediterranean pines (Pinus halepensis Mill. and Pinus pinaster Ait.) along a latitudinal cline using chloroplast microsatellite markers. Divers. Distrib. 11:3 (2005), 257–263.
21. González-Martínez, S.C., Burczyk, J., Nathan, R., Nanos, N., Gil, L., Alía, R., Effective gene dispersal and female reproductive success in Mediterranean maritime pine (Pinus pinaster Aiton). Mol. Ecol. 15:14 (2006), 4577–4588.
22. Hamrick, J.L., Response of forest trees to global environmental changes. For. Ecol. Manag. 197 (2004), 323–335.
23. Hamrick, J., Godt, M., Allozyme diversity in plant species. Urbanski, K., (eds.) Differentiation patterns in higher plants, 1989, Academic Press, New York, 53–67.
24. Hernández-Serrano, A., Verdú, M., González-Martínez, S.C., Pausas, J., Fire structures pine serotiny at different scales. Am. J. Bot. 100 (2013), 2349–2356.
25. Lamont, B.B., Le Maitre, D.C., Cowling, R.M., Enright, N.J., Canopy seed storage in woody plants. Bot. Rev. 57 (1991), 277–317.
26. Lefèvre, F., Human impacts on forest genetic resources in the temperate zone: an updated review. For. Ecol. Manag. 197 (2004), 257–271.
27. Liu, G.F., Dong, J.X., Jiang, Y., Lu, Y.F., Jiang, J., Zhao, G.Y., Analysis of genetic relationship in 12 species of section Strobus with ISSR markers. J. For. Res. 16 (2005), 213–215.
28. Lloret, F., Estevan, H., Vayreda, J., Terradas, J., Fire regenerative syndromes of forest woody species across fire and climatic gradients. Oecologia 146 (2005), 461–468.
29. Maia, P., Pausas, J.G., Vasques, A., Keizer, J.J., Fire severity as a key factor in post-fire regeneration of Pinus pinaster (Ait.) in central Portugal. Ann. For. Sci. 69:4 (2012), 489–498.
30. Mariette, S., Chagné, D., Lézier, C., Pastuszka, P., Raffin, A., Plomion, C., Kremer, A., Genetic diversity within and among Pinus pinaster populations: comparison between AFLP and microsatellite markers. Heredity 86 (2001), 469–479.
31. Oliveira, S.L.J., Pereira, J.M.C., Carreiras, J.M.B., Fire frequency analysis in Portugal (1975-2005), using Landsat-based burnt area maps. Int. J. Wildland Fire 21:1 (2012), 48–60.
32. Pausas, J.G., Vallejo, V.R., The role of fire in European Mediterranean ecosystems. Chuvieco, E., (eds.) Remote sensing of large wildfires in the European Mediterranean basis, 1999, Springler-Verlag, Berlin, 3–16.
33. Peakall, R.O.D., Smouse, P.E., GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol. Ecol. Notes 6 (2006), 288–295.
34. Pereira, J.M.C., Santos, M.T., Áreas queimadas e risco de incêndio em Portugal. 2003, DGF, MADRP, Lisboa (in Portuguese).
35. Popgene, version 1.32, The user-friendly shareware for population genetic analysis. Molecular Biology and Biotechnology Center, 1997, University of Alberta, Edmonton, Canada http://www.ualberta.ca/~fyeh. Accessed 23 November 2011.
36. Pritchard, J.K., Stephens, M., Donnelly, P., Inference of population structure using multilocus genotype data. Genetics 155 (2000), 945–959.
37. Rajora, O.P., Rahman, M.H., Buchert, G.P., Dancik, B.P., Microsatellite DNA analysis of genetic effects of harvesting in old-growth eastern white pine (Pinus strobus) in Ontario, Canada. Mol. Ecol. 9 (2000), 339–348.
38. Resco, V., Fischer, C., Colinas, C., Climate change effects on Mediterranean forests and preventive measures. New For. 33 (2007), 29–40.
39. Ribeiro, M.M., Genetics of Pinus pinaster Aiton. with cytoplasmic and nuclear markers. Doctoral dissertation, 2001, Swedish University of Agricultural Sciences.
40. Ribeiro, M.M., Plomion, C., Petit, R.J., Vendramin, G.G., et al. Variation of chloroplast single-sequence repeats in Portuguese maritime pine (Pinus pinaster Ait.). Theor. Appl. Genet. 102 (2001), 97–103.
41. Rubio-Moraga, A., Candel-Pérez, D., Lucas-Borja, M.E., Tiscar, P.A., Viñegla, B., Linares, J.C., Gómez-Gómez, L., Ahrazem, O., Genetic diversity of Pinus nigra Arn. populations in southern Spain and northern Morocco revealed by inter-simple sequence repeat profiles. Int. J. Mol. Sci. 13:5 (2012), 5645–5658.
42. Salvador, L., Alía, R., Agúndez, D., Gil, L., Genetic variation and migration pathways of maritime pine (Pinus pinaster Ait) in the Iberian Peninsula. Theor. Appl. Genet. 100:1 (2000), 89–95.
43. Simental-Rodríguez, S.L., Quiñones-Pérez, C.Z., Moya, D., Hernández-Tecles, E., López-Sánchez, C.A., Wehenkel, C., The relationship between species diversity and genetic structure in the rare Picea chihuahuana tree species community, Mexico. PLoS ONE, 9(11), 2014, e111623.
44. Syphard, A.D., Franklin, J., Species traits affect the per-formance of species distribution models for plants in south-ern California. J. Veg. Sci. 21 (2010), 177–189.
45. Tapias, R., Climent, J., Pardos, J., Gil, L., Life histories of Mediterranean pines. Plant Ecol. 171 (2004), 53–68.
46. Vincenzi, S., Piotti, A., Evolution of serotiny in maritime pine (Pinus pinaster) in the light of increasing frequency of fires. Plant Ecol. 215:7 (2014), 689–701.
47. Wang, M.B., Hao, Z.Z., Rangewide genetic diversity in natural populations of Chinese pine (Pinus tabulaeformis). Biochem. Genet. 48 (2010), 590–602.
48. Yang, C.P., Wei, L., Jiang, J., Liu, G.F., Zhao, G.Y., Analysis of genetic diversity for nineteen populations of Pinus sibirica Du Tour with technique of ISSR. J. Northeast For Univ. 33 (2005), 1–3.
49. Zhang, Z.Y., Chen, Y.Y., Li, D.Z., Detection of low genetic variation in a critically endangered Chinese pine, Pinus squamata, using RAPD and ISSR markers. Biochem. Genet. 43 (2005), 239–249.