riboFrame: An improved method for microbial taxonomy profiling from non-targeted metagenomics

Frontiers in Genetics

Volumn 6, Issue NOV, 2015, Pages

  Ramazzotti, Matteo ^a   Berná, Luisa ^b   Donati, Claudio ^c   Cavalieri, Duccio ^c  

^a UNIVERSITY OF FLORENCE   (Italy)

^b INSTITUT PASTEUR DE MONTEVIDEO   (Uruguay)

^c RESEARCH AND INNOVATION CENTRE   (Italy)

Author keywords

16S rDNA gene; Community profiling; Metagenomics; Non targeted approach; Short reads; Variable region

Indexed keywords

DNA 16S;

ACCURACY; ARTICLE; CONTROLLED STUDY; DIAGNOSTIC TEST ACCURACY STUDY; DNA FINGERPRINTING; DNA SEQUENCE; METAGENOMICS; MICROBIAL GENETICS; MICROBIOME; NEXT GENERATION SEQUENCING; NONHUMAN; OVERLAPPING GENE; PYROSEQUENCING; QUALITY CONTROL; RNA ANALYSIS; RNA EXTRACTION; SENSITIVITY AND SPECIFICITY; SIMULATION; TAXONOMY;

EID: 84954157006     PISSN: None     EISSN: 16648021     Source Type: Journal    
DOI: 10.3389/fgene.2015.00329     Document Type: Article

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