Inference of random walk models to describe leukocyte migration

Physical Biology

Volumn 12, Issue 6, 2015, Pages

  Jones, Phoebe J M ^a   Sim, Aaron ^a   Taylor, Harriet B ^a,b   Bugeon, Laurence ^a   Dallman, Magaret J ^a   Pereira, Bernard ^c   Stumpf, Michael P H ^a   Liepe, Juliane ^a  

^a IMPERIAL COLLEGE LONDON   (United Kingdom)

^b NATIONAL INSTITUTE FOR MEDICAL RESEARCH   (United Kingdom)

^c UNIVERSITY OF CAMBRIDGE   (United Kingdom)

Author keywords

approximate Bayesian computation; in vivo imaging; innate immune signalling

Indexed keywords

ANIMAL; BAYES THEOREM; BIOLOGICAL MODEL; CELL MOTION; LEUKOCYTE; MACROPHAGE; NEUTROPHIL; PHYSIOLOGY; ZEBRA FISH;

ANIMALS; BAYES THEOREM; CELL MOVEMENT; LEUKOCYTES; MACROPHAGES; MODELS, BIOLOGICAL; NEUTROPHILS; ZEBRAFISH;

EID: 84953776411     PISSN: 14783967     EISSN: 14783975     Source Type: Journal    
DOI: 10.1088/1478-3975/12/6/066001     Document Type: Article

References (39)

1. An G, Mi Q, Dutta-Moscato J and Vodovotz Y 2009 Wiley Interdiscip. Rev.: Syst. Biol. Med. 1 159-71
2. Berg H C 1993 Random Walks in Biology (Princeton, NJ: Princeton University Press)
3. Bogle G and Dunbar P R 2009 Immunology Cell Biol. 88 172-9
4. Boroughs L K, Antonyak M A, Johnson J L and Cerione R A 2011 J. Biol. Chem. 286 37094-107
5. Breitenberger E 1963 Biometrika 50 81-8
6. Chiacchio F, Pennisi M, Russo G, Motta S and Pappalardo F 2014 BioMed Res. Int. 2014 907171
7. Codling E A, Plank M J and Benhamou S 2008 J. R. Soc. Interface 5 813-34
8. Codling E and Hill N 2005 J. Theor. Biol. 233 573-88
9. Dada J O and Mendes P 2011 Integrative Biol. 3 86-96
10. Deza M M and Deza E 2006 Dictionary of Distances (Amsterdam: Elsevier)
11. Dohnal G 1987 J. Appl. Probab. 24 105-14
12. Duan J, Gao T and He G 2012 arXiv:1204.0855
13. Edwards A M et al 2007 Nature 449 1044-8
14. Fearnhead P and Prangle D 2012 J. R. Stat. Soc. B 74 419-74
15. Filippi S, Stumpf M P H, Barnes C P and Cornebise J 2013 Stat. Appl. Genetics Mol. Biol. 12 87-107
16. Gray C, Loynes C A, Whyte M K, Crossman D C, Renshaw S A and Chico T J 2011 Thrombosis Haemostasis 105 811
17. Holmes G R, Dixon G, Anderson S R, Reyes-Aldasoro C C, Elks P M, Billings S A, Whyte M K, Kadirkamanathan V and Renshaw S A 2012 Adv. Hematology 2012 792163
18. Horstemeyer M 2010 Practical Aspects of Computational Chemistry (Berlin: Springer) pp 87-135
19. Liepe J, Taylor H, Barnes C, Huvet M, Bugeon L, Thorne T, Lamb J, Dallman M and Stumpf M 2012 Integr. Biol. 10 335-45
20. Masopust D and Schenkel J M 2013 Nat. Rev. Immunology 13 309-20
21. Mathias J R, Walters K B and Huttenlocher A 2009 Chemotaxis (Berlin: Springer) pp 151-66
22. Neisyy A 2008 IUST Int. J. Eng. Sci. 19 17-19
23. Niethammer P, Grabher C, Look A T and Mitchison T J 2009 Nature 459 996-9
24. Potdar A A, Jeon J, Weaver A M, Quaranta V and Cummings P T 2010 PLoS One 5 e9636
25. Prangle D, Fearnhead P, Cox M P, Biggs P J and French N P 2014 Stat. Appl. Gen. Mol. Biol. 13 67-82
26. Razzell W, Evans I R, Martin P and Wood W 2013 Curr. Biol. 23 424-9
27. Ridley A J, Schwartz M A, Burridge K, Firtel R A, Ginsberg M H, Borisy G, Parsons J T and Horwitz A R 2003 Science 302 1704-9
28. Robert C and Casella G 2013 Monte Carlo Statistical Methods (Berlin: Springer)
29. Rosser G, Fletcher A, Maini P and Baker R 2013 J. R. Soc. Interface 10 20130273
30. Schiwon M et al 2014 Cell 156 456-68
31. Silk D, Filippi S and Stumpf M P H 2013 Stat. Appl. Gen. Mol. Biol. 12 603-18
32. Sim A, Liepe J and Stumpf M P H 2015 Phys. Rev. E 91 042115
33. Skinner M 2011 Nat. Rev. Mol. Cell Biol. 13 2-3
34. Taylor H, Liepe J, Barthen C, Bugeon C, Huvet M, Kirk P, Brown S, Lamb J, Dallman M and Stumpf M 2013 Immunol. Cell Biol. 91 60-69
35. Toni T, Welch D, Strelkowa N, Ipsen A and Stumpf M P 2009 J. R. Soc. Interface 6 187-202
36. Turner B M and van Zandt T 2012 J. Math. Psychology 56 69-85
37. Wilke C and Lee C 1955 Ind. Eng. Chem. 47 1253-7
38. Wilkinson R D 2013 Stat. Appl. Gen. Mol. Biol. 12 129-41
39. Wood W, Faria C and Jacinto A 2006 J. Cell Biol. 173 405-16