Reliability of brain volume measurements: A test-retest dataset

Scientific Data

Volumn 1, Issue , 2014, Pages

  Maclaren, Julian ^a   Han, Zhaoying ^a   Vos, Sjoerd B ^a,b   Fischbein, Nancy ^a   Bammer, Roland ^a  

^a STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b UNIVERSITY MEDICAL CENTER UTRECHT   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

ANATOMY AND HISTOLOGY; BRAIN; COMPUTER PROGRAM; FEMALE; HUMAN; LATERAL BRAIN VENTRICLE; MALE; NUCLEAR MAGNETIC RESONANCE IMAGING; ORGAN SIZE; PROCEDURES; REPRODUCIBILITY;

BRAIN; FEMALE; HUMANS; LATERAL VENTRICLES; MAGNETIC RESONANCE IMAGING; MALE; ORGAN SIZE; REPRODUCIBILITY OF RESULTS; SOFTWARE;

EID: 84951986471     PISSN: None     EISSN: 20524463     Source Type: Journal    
DOI: 10.1038/sdata.2014.37     Document Type: Article

References (30)

1. Jack, C. R. Jr et al. Medial temporal atrophy on MRI in normal aging and very mild Alzheimer's disease. Neurology 49, 786-794 (1997).
2. Dubois, B. et al. Research criteria for the diagnosis of Alzheimer's disease: revising the NINCDS-ADRDA criteria. Lancet Neurology 6, 734-746 (2007).
3. Jack, C. R. Jr et al. Rates of hippocampal atrophy correlate with change in clinical status in aging and AD. Neurology 55, 484-489 (2000).
4. Kovacevic, S., Rafii, M. S. & Brewer, J. B. High-throughput, fully automated volumetry for prediction of MMSE and CDR decline in mild cognitive impairment. Alzheimer Dis. Assoc. Disord. 23, 139-145 (2009).
5. Brewer, J. B., Magda, S., Airriess, C. & Smith, M. E. Fully-automated quantification of regional brain volumes for improved detection of focal atrophy in Alzheimer disease. AJNR Am. J. Neuroradiol. 30, 578-580 (2009).
6. Dale, A. M., Fischl, B. & Sereno, M. I. Cortical surface-based analysis. I. Segmentation and surface reconstruction. Neuroimage 9, 179-194 (1999).
7. Fischl, B. FreeSurfer. NeuroImage 62, 774-781 (2012).
8. Fischl, B. et al. Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain. Neuron 33, 341-355 (2002).
9. Jack, C. R. Jr et al. The Alzheimer's Disease Neuroimaging Initiative (ADNI): MRI methods. J. Magn. Reson. Imaging 27, 685-691 (2008).
10. Brewer, J. B. Fully-automated volumetric MRI with normative ranges: translation to clinical practice. Behavioural Neurology 21, 21-28 (2009).
11. Schuff, N. et al. MRI of hippocampal volume loss in early Alzheimer's disease in relation to ApoE genotype and biomarkers. Brain 132, 1067-1077 (2009).
12. Murphy, E. A. et al. Six-month atrophy in MTL structures is associated with subsequent memory decline in elderly controls. Neuroimage 53, 1310-1317 (2010).
13. McEvoy, L. K. et al. Mild cognitive impairment: baseline and longitudinal structural MR imaging measures improve predictive prognosis. Radiology 259, 834-843 (2011).
14. Sluimer, J. D. et al. Accelerating regional atrophy rates in the progression from normal aging to Alzheimer's disease. European Radiology 19, 2826-2833 (2009).
15. Karas, G. et al. Amnestic mild cognitive impairment: structural MR imaging findings predictive of conversion to Alzheimer disease. AJNR Am. J. Neuroradiol. 29, 944-949 (2008).
16. Duning, T. et al. Dehydration confounds the assessment of brain atrophy. Neurology 64, 548-550 (2005).
17. Kempton, M. J. et al. Dehydration affects brain structure and function in healthy adolescents. Hum. Brain Mapp. 32, 71-79 (2011).
18. Hagemann, G. et al. Changes in brain size during the menstrual cycle. PLoS ONE 6, e14655 (2011).
19. Gunter, J. L. et al. Measurement of MRI scanner performance with the ADNI phantom. Medical Physics 36, 2193-2205 (2009).
20. Gronenschild, E. H. et al. The effects of FreeSurfer version, workstation type, and Macintosh operating system version on anatomical volume and cortical thickness measurements. PLoS ONE 7, e38234 (2012).
21. Massart, D. L. et al. Handbook of Chemometrics and Qualimetrics: Part A (Elsevier Science Pub Co., 1997).
22. Gluer, C. C. et al. Accurate assessment of precision errors: how to measure the reproducibility of bone densitometry techniques. Osteoporosis Int. 5, 262-270 (1995).
23. Good, P. Permutation, Parametric and Bootstrap Tests of Hypotheses (Springer, 2005).
24. Tae, W. S., Kim, S. S., Lee, K. U., Nam, E. C. & Kim, K.W. Validation of hippocampal volumes measured using a manual method and two automated methods (FreeSurfer and IBASPM) in chronic major depressive disorder. Neuroradiology 50, 569-581 (2008).
25. Jovicich, J. et al. MRI-derived measurements of human subcortical, ventricular and intracranial brain volumes: Reliability effects of scan sessions, acquisition sequences, data analyses, scanner upgrade, scanner vendors and field strengths. Neuroimage 46, 177-192 (2009).
26. Lehmann, M. et al. Atrophy patterns in Alzheimer's disease and semantic dementia: a comparison of FreeSurfer and manual volumetric measurements. NeuroImage 49, 2264-2274 (2010).
27. Kempton, M. J. et al. Effects of acute dehydration on brain morphology in healthy humans. Hum. Brain Mapp. 30, 291-298 (2009).
28. Vrenken, H. et al. Validation of the automated method VIENA: An accurate, precise, and robust measure of ventricular enlargement. Hum. Brain Mapp. 35, 1101-1110 (2013).
29. Wonderlick, J. S. et al. Reliability of MRI-derived cortical and subcortical morphometric measures: effects of pulse sequence, voxel geometry, and parallel imaging. Neuroimage 44, 1324-1333 (2009).
30. Morey, R. A. et al. Scan-rescan reliability of subcortical brain volumes derived from automated segmentation. Hum. Brain Mapp. 31, 1751-1762 (2010).