메뉴 건너뛰기




Volumn 109, Issue 11, 2015, Pages 2103-2110

Draft genome sequence of Cercospora canescens: A leaf spot causing pathogen

Author keywords

Cercospora canescens; Functional annotation; Gene prediction; Sequencing and assembly; Vigna radiata

Indexed keywords


EID: 84950993838     PISSN: 00113891     EISSN: None     Source Type: Journal    
DOI: 10.18520/cs/v109/i11/2103-2110     Document Type: Article
Times cited : (23)

References (47)
  • 1
    • 84886076916 scopus 로고    scopus 로고
    • Stability and environmental indices analyses for yield attributing traits in Indian Vigna radiata genotypes under arid conditions
    • Raturi, A., Singh, S. K., Sharma, V. and Pathak, R., Stability and environmental indices analyses for yield attributing traits in Indian Vigna radiata genotypes under arid conditions. Asian J. Agric. Sci., 2012, 4, 126-133.
    • (2012) Asian J. Agric. Sci. , vol.4 , pp. 126-133
    • Raturi, A.1    Singh, S.K.2    Sharma, V.3    Pathak, R.4
  • 2
    • 84950984824 scopus 로고    scopus 로고
    • Project coordinator's report (mungbean and urdbean), All India coordinated research project on MULLaRP, Indian Institute of Pulses Research, Kanpur
    • Project coordinator's report (mungbean and urdbean), All India coordinated research project on MULLaRP, Indian Institute of Pulses Research, Kanpur, 2013-2014.
    • (2013)
  • 3
    • 1242315159 scopus 로고
    • Control of cercospora leaf spot of mungbean by foliar fungicides
    • Iqbal, S. M., Jubair, M. and Malik, B. A., Control of cercospora leaf spot of mungbean by foliar fungicides. Pak. J. Phytopathol., 1995, 7, 84-85.
    • (1995) Pak. J. Phytopathol. , vol.7 , pp. 84-85
    • Iqbal, S.M.1    Jubair, M.2    Malik, B.A.3
  • 4
    • 46349083461 scopus 로고    scopus 로고
    • Management of mungbean cercospora leaf spot through fungicides
    • Kapadiya, H. J. and Dhruj, I. U., Management of mungbean cercospora leaf spot through fungicides. Indian Phytopathol., 1999, 52(1), 96-97.
    • (1999) Indian Phytopathol. , vol.52 , Issue.1 , pp. 96-97
    • Kapadiya, H.J.1    Dhruj, I.U.2
  • 5
    • 79960032845 scopus 로고    scopus 로고
    • Quantitative trait loci mapping of cercospora leaf spot resistance in mungbean, Vigna radiata, Mol
    • Sompong, C., Somta, P., Sorjjapinum, W. and Srinives, P., Quantitative trait loci mapping of cercospora leaf spot resistance in mungbean, Vigna radiata, Mol. Breed., 2011, 28, 255-264.
    • (2011) Breed. , vol.28 , pp. 255-264
    • Sompong, C.1    Somta, P.2    Sorjjapinum, W.3    Srinives, P.4
  • 6
    • 42549087763 scopus 로고
    • Control of cercospora leaf spot of greengram by spraying bavistin
    • Grewal, J. S., Pal, M. and Kulshrestha, D. D., Control of cercospora leaf spot of greengram by spraying bavistin. Indian J. Agric. Sci., 1980, 50, 707-711.
    • (1980) Indian J. Agric. Sci. , vol.50 , pp. 707-711
    • Grewal, J.S.1    Pal, M.2    Kulshrestha, D.D.3
  • 8
    • 84951035656 scopus 로고    scopus 로고
    • First report of a new pathogenic variant of Cercospora canescens on mungbean (Vigna radiata) from India
    • org/10.5197/j.2044-0588.2012.026.006
    • Chand, R., Singh, V., Pal, C., Kumar, P. and Kumar, M., First report of a new pathogenic variant of Cercospora canescens on mungbean (Vigna radiata) from India. New Dis. Rep., 2012, 26, 6; doi: org/10.5197/j.2044-0588.2012.026.006.
    • (2012) New Dis. Rep. , vol.26 , pp. 6
    • Chand, R.1    Singh, V.2    Pal, C.3    Kumar, P.4    Kumar, M.5
  • 9
    • 84888836375 scopus 로고    scopus 로고
    • Development and characterization of genic SSR markers for mungbean (Vigna radiata (L.) Wilczek
    • Gupta, S. K., Bansal, R. and Gopalakrishna, T., Development and characterization of genic SSR markers for mungbean (Vigna radiata (L.) Wilczek) Euphytica, 2014, 195, 245-258; doi: 10.1007/s10681-013-0993-0.
    • (2014) Euphytica , vol.195 , pp. 245-258
    • Gupta, S.K.1    Bansal, R.2    Gopalakrishna, T.3
  • 10
    • 84995991952 scopus 로고
    • What we have learned from the international mungbean nurseries
    • University of Phillipines, Los Banos
    • Poehlman, J. M., What we have learned from the international mungbean nurseries. In Proceedings of the First International mungbean Symposium, University of Phillipines, Los Banos, 1977, pp. 97-100.
    • (1977) In Proceedings of the First International mungbean Symposium , pp. 97-100
    • Poehlman, J.M.1
  • 12
    • 84932991808 scopus 로고
    • Detection and characterization and Cercospora citrullina isolates that sporulate readily in culture
    • Goode, M. J. and Brown, G. R., Detection and characterization and Cercospora citrullina isolates that sporulate readily in culture. Phytopathology, 1970, 30, 1502-1503.
    • (1970) Phytopathology , vol.30 , pp. 1502-1503
    • Goode, M.J.1    Brown, G.R.2
  • 13
    • 84951114442 scopus 로고    scopus 로고
    • Technique for spore production in Cercospora canescens
    • Chand, R., Kumar, P., Singh, V. and Pal, C., Technique for spore production in Cercospora canescens. Indian Phytopthol., 2013, 66, 159-163.
    • (2013) Indian Phytopthol. , vol.66 , pp. 159-163
    • Chand, R.1    Kumar, P.2    Singh, V.3    Pal, C.4
  • 14
    • 0000203692 scopus 로고
    • Cercosporin, a photosensitizing toxin from Cercospora species
    • Daub, M. E., Cercosporin, a photosensitizing toxin from Cercospora species Phytopathology, 1982, 72, 370-374.
    • (1982) Phytopathology , vol.72 , pp. 370-374
    • Daub, M.E.1
  • 15
    • 84876320366 scopus 로고    scopus 로고
    • Species concepts in Cercospora: spotting the weeds among the roses
    • Groenewald, J. Z. et al., Species concepts in Cercospora: spotting the weeds among the roses. Stud. Mycol., 2013, 75, 115-170.
    • (2013) Stud. Mycol. , vol.75 , pp. 115-170
    • Groenewald, J.Z.1
  • 16
    • 34247540410 scopus 로고    scopus 로고
    • Molecular analysis of the cercosporin biosynthetic gene cluster in Cercospora nicotianae
    • Chen, H., Lee, M. H., Daub, M. E. and Chung, K. R., Molecular analysis of the cercosporin biosynthetic gene cluster in Cercospora nicotianae. Mol. Microbiol., 2007, 64, 755-770.
    • (2007) Mol. Microbiol. , vol.64 , pp. 755-770
    • Chen, H.1    Lee, M.H.2    Daub, M.E.3    Chung, K.R.4
  • 17
    • 84865956256 scopus 로고    scopus 로고
    • First report of the soybean frogeye leaf spot fungus (Cercospora sojina) resistant to quinone outside inhibitor fungicides in North America
    • Zhang, G. R., Newman, M. A. and Bradley, C. A., First report of the soybean frogeye leaf spot fungus (Cercospora sojina) resistant to quinone outside inhibitor fungicides in North America. Plant Dis., 2012, 96, 767.
    • (2012) Plant Dis. , vol.96 , pp. 767
    • Zhang, G.R.1    Newman, M.A.2    Bradley, C.A.3
  • 18
    • 33645285002 scopus 로고    scopus 로고
    • Control of benzimidazoleand DMI-resistant strains of Cercospora beticola with strobilurin fungicides
    • Karaoglanidis, G. S. and Bardas, G., Control of benzimidazoleand DMI-resistant strains of Cercospora beticola with strobilurin fungicides. Plant Dis., 2006, 90, 419-424.
    • (2006) Plant Dis. , vol.90 , pp. 419-424
    • Karaoglanidis, G.S.1    Bardas, G.2
  • 19
    • 0019321718 scopus 로고
    • Rapid isolation of high molecular weight plant DNA
    • Murray, M. G. and Thompson, W. F., Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res., 1980, 8, 4325.
    • (1980) Nucleic Acids Res. , vol.8 , pp. 4325
    • Murray, M.G.1    Thompson, W.F.2
  • 20
    • 23144444421 scopus 로고    scopus 로고
    • AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints
    • Stanke, M. and Morgenstern, B., AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints. Nucleic Acids Res., 2005, 33, W465-W467.
    • (2005) Nucleic Acids Res. , vol.33 , pp. W465-W467
    • Stanke, M.1    Morgenstern, B.2
  • 22
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: tool for the unification of biology
    • Ashburner, M. et al., Gene ontology: tool for the unification of biology. Gene Ontol. Consort. Nature Genet., 2000, 25, 25-29.
    • (2000) Gene Ontol. Consort. Nature Genet. , vol.25 , pp. 25-29
    • Ashburner, M.1
  • 23
    • 0037854629 scopus 로고    scopus 로고
    • Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.)
    • Thiel, T., Michalek, W., Varshney, R. K. and Graner, A., Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.). Theor. Appl. Genet., 2003, 106, 411-422.
    • (2003) Theor. Appl. Genet. , vol.106 , pp. 411-422
    • Thiel, T.1    Michalek, W.2    Varshney, R.K.3    Graner, A.4
  • 25
    • 34447321852 scopus 로고    scopus 로고
    • Enhancements and modifications of primer design program Primer3
    • Koressaar, T. and Remm, M., Enhancements and modifications of primer design program Primer3. Bioinformatics, 2007, 23, 1289-1291.
    • (2007) Bioinformatics , vol.23 , pp. 1289-1291
    • Koressaar, T.1    Remm, M.2
  • 26
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G. and Gibson, T. J., CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 1994, 22, 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 27
    • 0028294049 scopus 로고
    • MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers
    • Kumar, S., Tamura, K. and Nei, M., MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers. Comput. Appl. Biosci., 1994, 10, 189-191.
    • (1994) Comput. Appl. Biosci. , vol.10 , pp. 189-191
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 28
    • 58149203231 scopus 로고    scopus 로고
    • InterPro: the integrative protein signature database
    • Hunter, S. et al., InterPro: the integrative protein signature database. Nucleic Acids Res., 2009, 37, D211-D215.
    • (2009) Nucleic Acids Res. , vol.37 , pp. D211-D215
    • Hunter, S.1
  • 29
    • 43149115851 scopus 로고    scopus 로고
    • Velvet: algorithms for de novo short read assembly using de Bruijn graphs
    • Zerbino, D. R. and Birney, E., Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res., 2008, 18, 821-829.
    • (2008) Genome Res. , vol.18 , pp. 821-829
    • Zerbino, D.R.1    Birney, E.2
  • 30
    • 84869878610 scopus 로고    scopus 로고
    • Next generation sequencing and de novo transcriptome analysis of Costus pictus D. Don, a non-model plant with potent anti-diabetic properties
    • Annadurai, R. S. et al., Next generation sequencing and de novo transcriptome analysis of Costus pictus D. Don, a non-model plant with potent anti-diabetic properties. BMC Genomics, 2012, 13, 663.
    • (2012) BMC Genomics , vol.13 , pp. 663
    • Annadurai, R.S.1
  • 31
    • 20244366844 scopus 로고    scopus 로고
    • The genome sequence of the rice blast fungus Magnaporthe grisea
    • Dean, R. A. et al., The genome sequence of the rice blast fungus Magnaporthe grisea. Nature, 2005,434, 980-986.
    • (2005) Nature , vol.434 , pp. 980-986
    • Dean, R.A.1
  • 32
    • 79960976768 scopus 로고    scopus 로고
    • UniProt Knowledgebase: a hub of integrated protein data
    • Magrane, M. and Consortium, U., UniProt Knowledgebase: a hub of integrated protein data. Database (Oxford). 2011; doi: 10.1093/database/bar009.
    • (2011) Database (Oxford)
    • Magrane, M.1    Consortium, U.2
  • 33
    • 84930472632 scopus 로고    scopus 로고
    • The mitogen-activated protein kinase signal transduction pathways in Alternaria species
    • H., Xu, X., Wang, Y., Bajpai, V. K., Huang, L., Chen, Y. and Baek, K. H., The mitogen-activated protein kinase signal transduction pathways in Alternaria species. Plant Pathol. J., 2012, 28, 227-238.
    • (2012) Plant Pathol. J. , vol.28 , pp. 227-238
    • H.1    Xu, X.2    Wang, Y.3    Bajpai, V.K.4    Huang, L.5    Chen, Y.6    Baek, K.H.7
  • 34
    • 34547901845 scopus 로고    scopus 로고
    • Functional characterization of three genes encoding putative oxidoreductases required for cercosporin toxin biosynthesis in the fungus Cercospora nicotianae
    • Chen, H. Q., Lee, M. H. and Chung, K. R., Functional characterization of three genes encoding putative oxidoreductases required for cercosporin toxin biosynthesis in the fungus Cercospora nicotianae. Microbiology, 2007, 153, 2781-2790.
    • (2007) Microbiology , vol.153 , pp. 2781-2790
    • Chen, H.Q.1    Lee, M.H.2    Chung, K.R.3
  • 35
    • 0042694607 scopus 로고    scopus 로고
    • CZK3, a MAP kinase kinase kinase homolog in Cercospora zeaemaydis, regulates cercosporin biosynthesis, fungal development, and pathogenesis
    • Shim, W. B. and Dunkle, L. D., CZK3, a MAP kinase kinase kinase homolog in Cercospora zeaemaydis, regulates cercosporin biosynthesis, fungal development, and pathogenesis. Mol. Plant Microbe Interact., 2003, 16, 760-768.
    • (2003) Mol. Plant Microbe Interact. , vol.16 , pp. 760-768
    • Shim, W.B.1    Dunkle, L.D.2
  • 36
    • 0033213665 scopus 로고    scopus 로고
    • Independent signaling pathways regulate cellular turgor during hyperosmotic stress and appressorium-mediated plant infection by Magnaporthe grisea
    • Dixon, K. P., Xu, J. R., Smirnoff, N. and Talbot, N. J., Independent signaling pathways regulate cellular turgor during hyperosmotic stress and appressorium-mediated plant infection by Magnaporthe grisea. Plant Cell, 1999, 11, 2045-2058.
    • (1999) Plant Cell , vol.11 , pp. 2045-2058
    • Dixon, K.P.1    Xu, J.R.2    Smirnoff, N.3    Talbot, N.J.4
  • 37
    • 0000873340 scopus 로고
    • External growth, penetration and development of Cercospora zea-maydis in corn leaves
    • Beckman, P. M. and Payne, G. A., External growth, penetration and development of Cercospora zea-maydis in corn leaves. Phytopathology, 1982, 72, 810-815.
    • (1982) Phytopathology , vol.72 , pp. 810-815
    • Beckman, P.M.1    Payne, G.A.2
  • 38
    • 0029846423 scopus 로고    scopus 로고
    • MAP kinase and cAMP signaling regulate infection structure formation and pathogenic growth in the rice blast fungus Magnaporthe grisea
    • Xu, J. R. and Hamer, J. E., MAP kinase and cAMP signaling regulate infection structure formation and pathogenic growth in the rice blast fungus Magnaporthe grisea. Genes Dev., 1996, 10, 2696-2706.
    • (1996) Genes Dev. , vol.10 , pp. 2696-2706
    • Xu, J.R.1    Hamer, J.E.2
  • 40
    • 0029645404 scopus 로고
    • Structures and mechanisms of glycosyl hydrolases
    • Davies, G. and Henrissat, B., Structures and mechanisms of glycosyl hydrolases. Structure, 1995, 3, 853-859.
    • (1995) Structure , vol.3 , pp. 853-859
    • Davies, G.1    Henrissat, B.2
  • 41
    • 84872800633 scopus 로고    scopus 로고
    • Current understanding of HOG-MAPK pathways in Aspergillus fumigatus
    • Ma, D. and Li, R., Current understanding of HOG-MAPK pathways in Aspergillus fumigatus. Mycopathology, 2013, 175, 13-23.
    • (2013) Mycopathology , vol.175 , pp. 13-23
    • Ma, D.1    Li, R.2
  • 42
    • 84866276946 scopus 로고    scopus 로고
    • Tools to kill: genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina
    • Islam, M. S. et al., Tools to kill: genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina. BMC Genomics, 2012, 13, 493.
    • (2012) BMC Genomics , vol.13 , pp. 493
    • Islam, M.S.1
  • 43
    • 27944509040 scopus 로고    scopus 로고
    • Novel Gprotein-coupled receptor-like proteins in the plant pathogenic fungus Magnaporthe grisea
    • Kulkarni, R. D., Thon, M. R., Pan, H. and Dean, R. A., Novel Gprotein-coupled receptor-like proteins in the plant pathogenic fungus Magnaporthe grisea. Genome Biol., 2005, 6, R24.
    • (2005) Genome Biol. , vol.6 , pp. R24
    • Kulkarni, R.D.1    Thon, M.R.2    Pan, H.3    Dean, R.A.4
  • 44
    • 0031278132 scopus 로고    scopus 로고
    • The adenylate cyclase gene MAC1 of Magnaporthe grisea controls appressorium formation and other aspects of growth and development
    • Choi, W. and Dean, R. A., The adenylate cyclase gene MAC1 of Magnaporthe grisea controls appressorium formation and other aspects of growth and development. Plant Cell, 1997, 9, 1973-1983.
    • (1997) Plant Cell , vol.9 , pp. 1973-1983
    • Choi, W.1    Dean, R.A.2
  • 45
    • 0025152833 scopus 로고
    • The multi-functional 6-methylsalicylic acid synthase gene of Penicillium patulum: its gene structure relative to that of other polyketide synthases
    • Beck, J., Ripka, S., Siegner, A., Schiltz, E. and Schweizer, E., The multi-functional 6-methylsalicylic acid synthase gene of Penicillium patulum: its gene structure relative to that of other polyketide synthases. Eur. J. Biochem., 1990, 192, 487-498.
    • (1990) Eur. J. Biochem. , vol.192 , pp. 487-498
    • Beck, J.1    Ripka, S.2    Siegner, A.3    Schiltz, E.4    Schweizer, E.5
  • 46
    • 70249086774 scopus 로고    scopus 로고
    • Cercosporin: a phytoactivated toxin in plant disease
    • Daub, M. E. and Chung, K.-R., Cercosporin: a phytoactivated toxin in plant disease. APSnetFeatures., 2007, doi: 10.1094/APSnetFeature/2007-0207.
    • (2007) APSnetFeatures.
    • Daub, M.E.1    Chung, K.-R.2
  • 47
    • 14544279926 scopus 로고    scopus 로고
    • Survey of simple sequence repeats in completed fungal genomes
    • Karaoglu, H., Lee, C. M. Y. and Meyer, W., Survey of simple sequence repeats in completed fungal genomes. Mol. Biol. Evol., 2005, 22, 639-649.
    • (2005) Mol. Biol. Evol. , vol.22 , pp. 639-649
    • Karaoglu, H.1    Lee, C.M.Y.2    Meyer, W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.