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Volumn 117, Issue 2, 2015, Pages 121-131

Phylogenetic analysis and serotyping of Vibrio splendidus-related bacteria isolated from salmon farm cleaner fish

Author keywords

Biocontrol; Cleaner fish; MLSA; Molecular characterisation; Multilocus sequence analysis; Salmon louse; Serotyping; Vibrio splendidus

Indexed keywords

BACTERIUM; BIOLOGICAL CONTROL; GENETIC ANALYSIS; PHYLOGENETICS; POPULATION STRUCTURE; SALMONID CULTURE;

EID: 84950122594     PISSN: 01775103     EISSN: 16161580     Source Type: Journal    
DOI: 10.3354/dao02938     Document Type: Article
Times cited : (17)

References (33)
  • 1
    • 84959461586 scopus 로고    scopus 로고
    • Pasteurellosis in lumpsucker cyclopterus lumpus, farmed in Norway
    • others (in press)
    • Alarcón M, Gulla S, Røsaeg MV, Rønneseth A and others (2015) Pasteurellosis in lumpsucker Cyclopterus lumpus, farmed in Norway. J Fish Dis (in press) doi: 10.1111/jfd.12366
    • (2015) J Fish Dis
    • Alarcón, M.1    Gulla, S.2    Røsaeg, M.V.3    Rønneseth, A.4
  • 2
    • 33745256005 scopus 로고    scopus 로고
    • Approximate likelihoodratio test for branches: A fast, accurate, and powerful alternative
    • Anisimova M, Gascuel O (2006) Approximate likelihoodratio test for branches: a fast, accurate, and powerful alternative. Syst Biol 55: 539-552
    • (2006) Syst Biol , vol.55 , pp. 539-552
    • Anisimova, M.1    Gascuel, O.2
  • 3
    • 34548690590 scopus 로고    scopus 로고
    • Susceptibility of corkwing wrasse symphodus melops, goldsinny wrasse ctenolabrus rupestis, and Atlantic salmon salmo salar smolt, to experimental challenge with vibrio tapetis and vibrio splendidus isolated from corkwing wrasse
    • Bergh Ø, Samuelsen OB (2007) Susceptibility of corkwing wrasse Symphodus melops, goldsinny wrasse Ctenolabrus rupestis, and Atlantic salmon Salmo salar smolt, to experimental challenge with Vibrio tapetis and Vibrio splendidus isolated from corkwing wrasse. Aquacult Int 15: 11-18
    • (2007) Aquacult Int , vol.15 , pp. 11-18
    • Bergh, O.1    Samuelsen, O.B.2
  • 4
    • 84890425927 scopus 로고    scopus 로고
    • Vibrio splendidus, vibrio ichthyoenteri and vibrio pacinii isolated from the digestive tract microflora of larval ballan wrasse, Labrus bergylta Ascanius, and goldsinny wrasse, Ctenolabrus rupestris (L.)
    • Birkbeck TH, Treasurer J.W (2014) Vibrio splendidus, Vibrio ichthyoenteri and Vibrio pacinii isolated from the digestive tract microflora of larval ballan wrasse, Labrus bergylta Ascanius, and goldsinny wrasse, Ctenolabrus rupestris (L.). J Fish Dis 37: 69-74
    • (2014) J Fish Dis , vol.37 , pp. 69-74
    • Birkbeck, T.H.1    Treasurer, J.W.2
  • 6
    • 0040460179 scopus 로고    scopus 로고
    • List of bacterial names with standing in nomenclature: A folder available on the internet
    • Euzéby JP (1997) List of bacterial names with standing in nomenclature: a folder available on the internet. Int J Syst Bacteriol 47: 590-592
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 590-592
    • Euzéby, J.P.1
  • 7
    • 1342304133 scopus 로고    scopus 로고
    • EBURST: Inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multi locus sequence typing data
    • Feil EJ, Li BC, Aanensen DM, Hanage WP, Spratt B.G (2004) eBURST: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multi locus sequence typing data. J Bacteriol 186: 1518-1530
    • (2004) J Bacteriol , vol.186 , pp. 1518-1530
    • Feil, E.J.1    Li, B.C.2    Aanensen, D.M.3    Hanage, W.P.4    Spratt, B.G.5
  • 9
    • 3242799066 scopus 로고    scopus 로고
    • Screening of vibrio isolates to develop an experimental infection model in the pacific oyster crassostrea gigas
    • Gay M, Berthe FCJ, Le Roux F (2004) Screening of Vibrio isolates to develop an experimental infection model in the Pacific oyster Crassostrea gigas. Dis Aquat Org 59: 49-56
    • (2004) Dis Aquat Org , vol.59 , pp. 49-56
    • Gay, M.1    Berthe, F.C.J.2    Le Roux, F.3
  • 10
    • 77950806408 scopus 로고    scopus 로고
    • New algorithms and methods to estimate maximum-likelihood phylogenies: Assessing the performance of PhyML 3.0
    • Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, Gascuel O (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59: 307-321
    • (2010) Syst Biol , vol.59 , pp. 307-321
    • Guindon, S.1    Dufayard, J.F.2    Lefort, V.3    Anisimova, M.4    Hordijk, W.5    Gascuel, O.6
  • 11
    • 84957841733 scopus 로고    scopus 로고
    • VapA (A-layer) typing differentiates aeromonas salmonicida subspecies and identifies a number of previously undescribed subtypes
    • (in press)
    • Gulla S, Lund V, Kristoffersen AB, Sørum H, Colquhoun DJ (2015) vapA (A-layer) typing differentiates Aeromonas salmonicida subspecies and identifies a number of previously undescribed subtypes. J Fish Dis (in press) doi: 10.1111/jfd.12367
    • (2015) J Fish Dis
    • Gulla, S.1    Lund, V.2    Kristoffersen, A.B.3    Sørum, H.4    Colquhoun, D.J.5
  • 14
    • 64549127761 scopus 로고    scopus 로고
    • The nonrandom microheterogeneity of 16S rRNA genes in vibrio splendidus may reflect adaptation to versatile lifestyles
    • Jensen S, Frost P, Torsvik V.L (2009) The nonrandom microheterogeneity of 16S rRNA genes in Vibrio splendidus may reflect adaptation to versatile lifestyles. FEMS Microbiol Lett 294: 207-215
    • (2009) FEMS Microbiol Lett , vol.294 , pp. 207-215
    • Jensen, S.1    Frost, P.2    Torsvik, V.L.3
  • 17
    • 33846922875 scopus 로고    scopus 로고
    • Vibrio splendidus
    • Thompson FL, Austin B, Swings J (eds) American Society of Microbiology, Washington, DC
    • Le Roux F, Austin B (2006) Vibrio splendidus. In: Thompson FL, Austin B, Swings J (eds) The biology of vibrios. American Society of Microbiology, Washington, DC, p 285-296
    • (2006) The Biology of Vibrios , pp. 285-296
    • Le Roux, F.1    Austin, B.2
  • 18
    • 3042532644 scopus 로고    scopus 로고
    • Phylogenetic study and identification of vibrio splendidus-related strains based on gyrB gene sequences
    • Le Roux F, Gay M, Lambert C, Nicolas JL, Gouy M, Berthe F (2004) Phylogenetic study and identification of Vibrio splendidus-related strains based on gyrB gene sequences. Dis Aquat Org 58: 143-150
    • (2004) Dis Aquat Org , vol.58 , pp. 143-150
    • Le Roux, F.1    Gay, M.2    Lambert, C.3    Nicolas, J.L.4    Gouy, M.5    Berthe, F.6
  • 20
    • 84950104705 scopus 로고    scopus 로고
    • Rensefiskhelse-kartlegging av dødelighet og dødelighetsårsaker
    • Norwegian Veterinary Institute, Trondheim (with English summary)
    • Nilsen A, Viljugrein H, Røsæg MV, Colquhoun D (2014) Rensefiskhelse-kartlegging av dødelighet og dødelighetsårsaker [Cleaner fish health - a survey of mortalities and causes of death]. Rep Ser 12-2014. Norwegian Veterinary Institute, Trondheim (with English summary)
    • (2014) Rep Ser 12-2014
    • Nilsen, A.1    Viljugrein, H.2    Røsæg, M.V.3    Colquhoun, D.4
  • 21
    • 84891817929 scopus 로고    scopus 로고
    • LPSN-list of prokaryotic names with standing in nomenclature
    • Parte AC (2014) LPSN-list of prokaryotic names with standing in nomenclature. Nucleic Acids Res 42: D613-D616
    • (2014) Nucleic Acids Res , vol.42 , pp. D613-D616
    • Parte, A.C.1
  • 22
    • 76849100045 scopus 로고    scopus 로고
    • Multilocus sequence analysis of the central clade of the genus vibrio by using the 16S rRNA, recA, pyrH, rpoD, gyrB, rctB and toxR genes
    • Pascual J, Macián MC, Arahal DR, Garay E, Pujalte M.J (2010) Multilocus sequence analysis of the central clade of the genus Vibrio by using the 16S rRNA, recA, pyrH, rpoD, gyrB, rctB and toxR genes. Int J Syst Evol Microbiol 60: 154-165
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 154-165
    • Pascual, J.1    Macián, M.C.2    Arahal, D.R.3    Garay, E.4    Pujalte, M.J.5
  • 23
    • 34447627908 scopus 로고    scopus 로고
    • Improved DNA sequencing quality and efficiency using an optimized fast cycle sequencing protocol
    • Platt AR, Woodhall RW, George A.L (2007) Improved DNA sequencing quality and efficiency using an optimized fast cycle sequencing protocol. Biotechniques 43: 58-62
    • (2007) Biotechniques , vol.43 , pp. 58-62
    • Platt, A.R.1    Woodhall, R.W.2    George, A.L.3
  • 25
    • 84892159415 scopus 로고    scopus 로고
    • Updating the vibrio clades defined by multilocus sequence phylogeny: Proposal of eight new clades, and the description of vibrio tritonius sp. Nov
    • others
    • Sawabe T, Ogura Y, Matsumura Y, Feng G and others (2013) Updating the Vibrio clades defined by multilocus sequence phylogeny: proposal of eight new clades, and the description of Vibrio tritonius sp. Nov. Front Microbiol 4: 414
    • (2013) Front Microbiol , vol.4 , pp. 414
    • Sawabe, T.1    Ogura, Y.2    Matsumura, Y.3    Feng, G.4
  • 27
    • 0035989633 scopus 로고    scopus 로고
    • Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology
    • others
    • Stackebrandt E, Frederiksen W, Garrity GM, Grimont PAD and others (2002) Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology. Int J Syst Evol Microbiol 52: 1043-1047
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1043-1047
    • Stackebrandt, E.1    Frederiksen, W.2    Garrity, G.M.3    Grimont, P.A.D.4
  • 28
    • 0032755259 scopus 로고    scopus 로고
    • Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut
    • Suau A, Bonnet R, Sutren M, Godon JJ, Gibson GR, Collins MD, Doré J (1999) Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut. Appl Environ Microbiol 65: 4799-4807
    • (1999) Appl Environ Microbiol , vol.65 , pp. 4799-4807
    • Suau, A.1    Bonnet, R.2    Sutren, M.3    Godon, J.J.4    Gibson, G.R.5    Collins, M.D.6    Doré, J.7
  • 31
    • 14544287770 scopus 로고    scopus 로고
    • Genotypic diversity within a natural coastal bacterioplankton population
    • others
    • Thompson JR, Pacocha S, Pharino C, Klepac-Ceraj V and others (2005) Genotypic diversity within a natural coastal bacterioplankton population. Science 307: 1311-1313
    • (2005) Science , vol.307 , pp. 1311-1313
    • Thompson, J.R.1    Pacocha, S.2    Pharino, C.3    Klepac-Ceraj, V.4
  • 32
  • 33
    • 78249258710 scopus 로고    scopus 로고
    • O-antigen diversity and lateral transfer of the wbe region among vibrio splendidus isolates
    • Wildschutte H, Preheim SP, Hernandez Y, Polz M.F (2010) O-antigen diversity and lateral transfer of the wbe region among Vibrio splendidus isolates. Environ Microbiol 12: 2977-2987
    • (2010) Environ Microbiol , vol.12 , pp. 2977-2987
    • Wildschutte, H.1    Preheim, S.P.2    Hernandez, Y.3    Polz, M.F.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.