-
1
-
-
77956848635
-
Long-term restriction by APOBEC3F selects human immunodeficiency virus type 1 variants with restored Vif function
-
Albin J.S., Haché G., Hultquist J.F., Brown W.L., Harris R.S. Long-term restriction by APOBEC3F selects human immunodeficiency virus type 1 variants with restored Vif function. J. Virol. 2010, 84:10209-10219.
-
(2010)
J. Virol.
, vol.84
, pp. 10209-10219
-
-
Albin, J.S.1
Haché, G.2
Hultquist, J.F.3
Brown, W.L.4
Harris, R.S.5
-
2
-
-
78650372168
-
A single amino acid in human APOBEC3F alters susceptibility to HIV-1 Vif
-
Albin J.S., LaRue R.S., Weaver J.A., Brown W.L., Shindo K., Harjes E., Matsuo H., Harris R.S. A single amino acid in human APOBEC3F alters susceptibility to HIV-1 Vif. J. Biol. Chem. 2010, 285:40785-40792.
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 40785-40792
-
-
Albin, J.S.1
LaRue, R.S.2
Weaver, J.A.3
Brown, W.L.4
Shindo, K.5
Harjes, E.6
Matsuo, H.7
Harris, R.S.8
-
3
-
-
84976447075
-
Transcriptional regulation of APOBEC3 antiviral immunity through the CBF-β/RUNX axis
-
Anderson B.D., Harris R.S. Transcriptional regulation of APOBEC3 antiviral immunity through the CBF-β/RUNX axis. Sci. Adv. 2015, 1:e1500296.
-
(2015)
Sci. Adv.
, vol.1
-
-
Anderson, B.D.1
Harris, R.S.2
-
4
-
-
4143092717
-
Cytidine deamination of retroviral DNA by diverse APOBEC proteins
-
Bishop K.N., Holmes R.K., Sheehy A.M., Davidson N.O., Cho S.J., Malim M.H. Cytidine deamination of retroviral DNA by diverse APOBEC proteins. Curr. Biol. 2004, 14:1392-1396.
-
(2004)
Curr. Biol.
, vol.14
, pp. 1392-1396
-
-
Bishop, K.N.1
Holmes, R.K.2
Sheehy, A.M.3
Davidson, N.O.4
Cho, S.J.5
Malim, M.H.6
-
5
-
-
84878866554
-
Crystal structure of the DNA cytosine deaminase APOBEC3F: the catalytically active and HIV-1 Vif-binding domain
-
Bohn M.F., Shandilya S.M., Albin J.S., Kouno T., Anderson B.D., McDougle R.M., Carpenter M.A., Rathore A., Evans L., Davis A.N., et al. Crystal structure of the DNA cytosine deaminase APOBEC3F: the catalytically active and HIV-1 Vif-binding domain. Structure 2013, 21:1042-1050.
-
(2013)
Structure
, vol.21
, pp. 1042-1050
-
-
Bohn, M.F.1
Shandilya, S.M.2
Albin, J.S.3
Kouno, T.4
Anderson, B.D.5
McDougle, R.M.6
Carpenter, M.A.7
Rathore, A.8
Evans, L.9
Davis, A.N.10
-
6
-
-
84896692562
-
Multiple APOBEC3 restriction factors for HIV-1 and one Vif to rule them all
-
Desimmie B.A., Delviks-Frankenberrry K.A., Burdick R.C., Qi D., Izumi T., Pathak V.K. Multiple APOBEC3 restriction factors for HIV-1 and one Vif to rule them all. J. Mol. Biol. 2014, 426:1220-1245.
-
(2014)
J. Mol. Biol.
, vol.426
, pp. 1220-1245
-
-
Desimmie, B.A.1
Delviks-Frankenberrry, K.A.2
Burdick, R.C.3
Qi, D.4
Izumi, T.5
Pathak, V.K.6
-
7
-
-
0031929672
-
Identification of highly attenuated mutants of simian immunodeficiency virus
-
Desrosiers R.C., Lifson J.D., Gibbs J.S., Czajak S.C., Howe A.Y., Arthur L.O., Johnson R.P. Identification of highly attenuated mutants of simian immunodeficiency virus. J. Virol. 1998, 72:1431-1437.
-
(1998)
J. Virol.
, vol.72
, pp. 1431-1437
-
-
Desrosiers, R.C.1
Lifson, J.D.2
Gibbs, J.S.3
Czajak, S.C.4
Howe, A.Y.5
Arthur, L.O.6
Johnson, R.P.7
-
8
-
-
21744446093
-
Nuclear localization of HIV type 1 Vif isolated from a long-term asymptomatic individual and potential role in virus attenuation
-
Farrow M.A., Somasundaran M., Zhang C., Gabuzda D., Sullivan J.L., Greenough T.C. Nuclear localization of HIV type 1 Vif isolated from a long-term asymptomatic individual and potential role in virus attenuation. AIDS Res. Hum. Retroviruses 2005, 21:565-574.
-
(2005)
AIDS Res. Hum. Retroviruses
, vol.21
, pp. 565-574
-
-
Farrow, M.A.1
Somasundaran, M.2
Zhang, C.3
Gabuzda, D.4
Sullivan, J.L.5
Greenough, T.C.6
-
9
-
-
84892188402
-
Structural basis for hijacking CBF-β and CUL5 E3 ligase complex by HIV-1 Vif
-
Guo Y., Dong L., Qiu X., Wang Y., Zhang B., Liu H., Yu Y., Zang Y., Yang M., Huang Z. Structural basis for hijacking CBF-β and CUL5 E3 ligase complex by HIV-1 Vif. Nature 2014, 505:229-233.
-
(2014)
Nature
, vol.505
, pp. 229-233
-
-
Guo, Y.1
Dong, L.2
Qiu, X.3
Wang, Y.4
Zhang, B.5
Liu, H.6
Yu, Y.7
Zang, Y.8
Yang, M.9
Huang, Z.10
-
10
-
-
15744390742
-
The retroviral hypermutation specificity of APOBEC3F and APOBEC3G is governed by the C-terminal DNA cytosine deaminase domain
-
Haché G., Liddament M.T., Harris R.S. The retroviral hypermutation specificity of APOBEC3F and APOBEC3G is governed by the C-terminal DNA cytosine deaminase domain. J. Biol. Chem. 2005, 280:10920-10924.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 10920-10924
-
-
Haché, G.1
Liddament, M.T.2
Harris, R.S.3
-
11
-
-
44349179677
-
Evolution of HIV-1 isolates that use a novel Vif-independent mechanism to resist restriction by human APOBEC3G
-
Haché G., Shindo K., Albin J.S., Harris R.S. Evolution of HIV-1 isolates that use a novel Vif-independent mechanism to resist restriction by human APOBEC3G. Curr. Biol. 2008, 18:819-824.
-
(2008)
Curr. Biol.
, vol.18
, pp. 819-824
-
-
Haché, G.1
Shindo, K.2
Albin, J.S.3
Harris, R.S.4
-
12
-
-
66149158579
-
Optimal translation initiation enables Vif-deficient human immunodeficiency virus type 1 to escape restriction by APOBEC3G
-
Haché G., Abbink T.E., Berkhout B., Harris R.S. Optimal translation initiation enables Vif-deficient human immunodeficiency virus type 1 to escape restriction by APOBEC3G. J. Virol. 2009, 83:5956-5960.
-
(2009)
J. Virol.
, vol.83
, pp. 5956-5960
-
-
Haché, G.1
Abbink, T.E.2
Berkhout, B.3
Harris, R.S.4
-
13
-
-
84939942920
-
APOBECs and virus restriction
-
Harris R.S., Dudley J.P. APOBECs and virus restriction. Virology 2015, 479-480:131-145.
-
(2015)
Virology
, vol.479-480
, pp. 131-145
-
-
Harris, R.S.1
Dudley, J.P.2
-
14
-
-
80055105950
-
Human and rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H demonstrate a conserved capacity to restrict Vif-deficient HIV-1
-
Hultquist J.F., Lengyel J.A., Refsland E.W., LaRue R.S., Lackey L., Brown W.L., Harris R.S. Human and rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H demonstrate a conserved capacity to restrict Vif-deficient HIV-1. J. Virol. 2011, 85:11220-11234.
-
(2011)
J. Virol.
, vol.85
, pp. 11220-11234
-
-
Hultquist, J.F.1
Lengyel, J.A.2
Refsland, E.W.3
LaRue, R.S.4
Lackey, L.5
Brown, W.L.6
Harris, R.S.7
-
15
-
-
84867229556
-
The APOBEC3C crystal structure and the interface for HIV-1 Vif binding
-
Kitamura S., Ode H., Nakashima M., Imahashi M., Naganawa Y., Kurosawa T., Yokomaku Y., Yamane T., Watanabe N., Suzuki A., et al. The APOBEC3C crystal structure and the interface for HIV-1 Vif binding. Nat. Struct. Mol. Biol. 2012, 19:1005-1010.
-
(2012)
Nat. Struct. Mol. Biol.
, vol.19
, pp. 1005-1010
-
-
Kitamura, S.1
Ode, H.2
Nakashima, M.3
Imahashi, M.4
Naganawa, Y.5
Kurosawa, T.6
Yokomaku, Y.7
Yamane, T.8
Watanabe, N.9
Suzuki, A.10
-
16
-
-
84930414502
-
Structure of the Vif-binding domain of the antiviral enzyme APOBEC3G
-
Kouno T., Luengas E.M., Shigematsu M., Shandilya S.M., Zhang J., Chen L., Hara M., Schiffer C.A., Harris R.S., Matsuo H. Structure of the Vif-binding domain of the antiviral enzyme APOBEC3G. Nat. Struct. Mol. Biol. 2015, 22:485-491.
-
(2015)
Nat. Struct. Mol. Biol.
, vol.22
, pp. 485-491
-
-
Kouno, T.1
Luengas, E.M.2
Shigematsu, M.3
Shandilya, S.M.4
Zhang, J.5
Chen, L.6
Hara, M.7
Schiffer, C.A.8
Harris, R.S.9
Matsuo, H.10
-
18
-
-
84907992902
-
APOBEC3F determinants of HIV-1 Vif sensitivity
-
Land A.M., Shaban N.M., Evans L., Hultquist J.F., Albin J.S., Harris R.S. APOBEC3F determinants of HIV-1 Vif sensitivity. J. Virol. 2014, 88:12923-12927.
-
(2014)
J. Virol.
, vol.88
, pp. 12923-12927
-
-
Land, A.M.1
Shaban, N.M.2
Evans, L.3
Hultquist, J.F.4
Albin, J.S.5
Harris, R.S.6
-
19
-
-
4143071549
-
APOBEC3F properties and hypermutation preferences indicate activity against HIV-1 in vivo
-
Liddament M.T., Brown W.L., Schumacher A.J., Harris R.S. APOBEC3F properties and hypermutation preferences indicate activity against HIV-1 in vivo. Curr. Biol. 2004, 14:1385-1391.
-
(2004)
Curr. Biol.
, vol.14
, pp. 1385-1391
-
-
Liddament, M.T.1
Brown, W.L.2
Schumacher, A.J.3
Harris, R.S.4
-
20
-
-
84886063104
-
HIV-1 Vif adaptation to human APOBEC3H haplotypes
-
Ooms M., Brayton B., Letko M., Maio S.M., Pilcher C.D., Hecht F.M., Barbour J.D., Simon V. HIV-1 Vif adaptation to human APOBEC3H haplotypes. Cell Host Microbe 2013, 14:411-421.
-
(2013)
Cell Host Microbe
, vol.14
, pp. 411-421
-
-
Ooms, M.1
Brayton, B.2
Letko, M.3
Maio, S.M.4
Pilcher, C.D.5
Hecht, F.M.6
Barbour, J.D.7
Simon, V.8
-
21
-
-
73449121124
-
Deletion, insertion and stop codon mutations in vif genes of HIV-1 infecting slow progressor patients
-
Rangel H.R., Garzaro D., Rodríguez A.K., Ramírez A.H., Ameli G., Del Rosario Gutiérrez C., Pujol F.H. Deletion, insertion and stop codon mutations in vif genes of HIV-1 infecting slow progressor patients. J. Infect. Dev. Ctries. 2009, 3:531-538.
-
(2009)
J. Infect. Dev. Ctries.
, vol.3
, pp. 531-538
-
-
Rangel, H.R.1
Garzaro, D.2
Rodríguez, A.K.3
Ramírez, A.H.4
Ameli, G.5
Del Rosario Gutiérrez, C.6
Pujol, F.H.7
-
22
-
-
84864576348
-
Endogenous origins of HIV-1 G-to-A hypermutation and restriction in the nonpermissive T cell line CEM2n
-
Refsland E.W., Hultquist J.F., Harris R.S. Endogenous origins of HIV-1 G-to-A hypermutation and restriction in the nonpermissive T cell line CEM2n. PLoS Pathog. 2012, 8:e1002800.
-
(2012)
PLoS Pathog.
, vol.8
-
-
Refsland, E.W.1
Hultquist, J.F.2
Harris, R.S.3
-
23
-
-
84912073468
-
Natural polymorphisms in human APOBEC3H and HIV-1 Vif combine in primary T lymphocytes to affect viral G-to-A mutation levels and infectivity
-
Refsland E.W., Hultquist J.F., Luengas E.M., Ikeda T., Shaban N.M., Law E.K., Brown W.L., Reilly C., Emerman M., Harris R.S. Natural polymorphisms in human APOBEC3H and HIV-1 Vif combine in primary T lymphocytes to affect viral G-to-A mutation levels and infectivity. PLoS Genet. 2014, 10:e1004761.
-
(2014)
PLoS Genet.
, vol.10
-
-
Refsland, E.W.1
Hultquist, J.F.2
Luengas, E.M.3
Ikeda, T.4
Shaban, N.M.5
Law, E.K.6
Brown, W.L.7
Reilly, C.8
Emerman, M.9
Harris, R.S.10
-
24
-
-
34547119261
-
Identification of two distinct human immunodeficiency virus type 1 Vif determinants critical for interactions with human APOBEC3G and APOBEC3F
-
Russell R.A., Pathak V.K. Identification of two distinct human immunodeficiency virus type 1 Vif determinants critical for interactions with human APOBEC3G and APOBEC3F. J. Virol. 2007, 81:8201-8210.
-
(2007)
J. Virol.
, vol.81
, pp. 8201-8210
-
-
Russell, R.A.1
Pathak, V.K.2
-
25
-
-
59649118427
-
Distinct domains within APOBEC3G and APOBEC3F interact with separate regions of human immunodeficiency virus type 1 Vif
-
Russell R.A., Smith J., Barr R., Bhattacharyya D., Pathak V.K. Distinct domains within APOBEC3G and APOBEC3F interact with separate regions of human immunodeficiency virus type 1 Vif. J. Virol. 2009, 83:1992-2003.
-
(2009)
J. Virol.
, vol.83
, pp. 1992-2003
-
-
Russell, R.A.1
Smith, J.2
Barr, R.3
Bhattacharyya, D.4
Pathak, V.K.5
-
26
-
-
84908339006
-
APOBEC3D and APOBEC3F potently promote HIV-1 diversification and evolution in humanized mouse model
-
Sato K., Takeuchi J.S., Misawa N., Izumi T., Kobayashi T., Kimura Y., Iwami S., Takaori-Kondo A., Hu W.S., Aihara K., et al. APOBEC3D and APOBEC3F potently promote HIV-1 diversification and evolution in humanized mouse model. PLoS Pathog. 2014, 10:e1004453.
-
(2014)
PLoS Pathog.
, vol.10
-
-
Sato, K.1
Takeuchi, J.S.2
Misawa, N.3
Izumi, T.4
Kobayashi, T.5
Kimura, Y.6
Iwami, S.7
Takaori-Kondo, A.8
Hu, W.S.9
Aihara, K.10
-
27
-
-
77954535463
-
Comparison of the replication and persistence of simian-human immunodeficiency viruses expressing Vif proteins with mutation of the SLQYLA or HCCH domains in macaques
-
Schmitt K., Hill M.S., Liu Z., Ruiz A., Culley N., Pinson D.M., Stephens E.B. Comparison of the replication and persistence of simian-human immunodeficiency viruses expressing Vif proteins with mutation of the SLQYLA or HCCH domains in macaques. Virology 2010, 404:187-203.
-
(2010)
Virology
, vol.404
, pp. 187-203
-
-
Schmitt, K.1
Hill, M.S.2
Liu, Z.3
Ruiz, A.4
Culley, N.5
Pinson, D.M.6
Stephens, E.B.7
-
28
-
-
33744939997
-
Mutational alteration of human immunodeficiency virus type 1 Vif allows for functional interaction with nonhuman primate APOBEC3G
-
Schröfelbauer B., Senger T., Manning G., Landau N.R. Mutational alteration of human immunodeficiency virus type 1 Vif allows for functional interaction with nonhuman primate APOBEC3G. J. Virol. 2006, 80:5984-5991.
-
(2006)
J. Virol.
, vol.80
, pp. 5984-5991
-
-
Schröfelbauer, B.1
Senger, T.2
Manning, G.3
Landau, N.R.4
-
29
-
-
67649888155
-
Natural variation in Vif: differential impact on APOBEC3G/3F and a potential role in HIV-1 diversification
-
Simon V., Zennou V., Murray D., Huang Y., Ho D.D., Bieniasz P.D. Natural variation in Vif: differential impact on APOBEC3G/3F and a potential role in HIV-1 diversification. PLoS Pathog. 2005, 1:e6.
-
(2005)
PLoS Pathog.
, vol.1
, pp. e6
-
-
Simon, V.1
Zennou, V.2
Murray, D.3
Huang, Y.4
Ho, D.D.5
Bieniasz, P.D.6
-
30
-
-
84887276822
-
Structural determinants of HIV-1 Vif susceptibility and DNA binding in APOBEC3F
-
Siu K.K., Sultana A., Azimi F.C., Lee J.E. Structural determinants of HIV-1 Vif susceptibility and DNA binding in APOBEC3F. Nat. Commun. 2013, 4:2593.
-
(2013)
Nat. Commun.
, vol.4
, pp. 2593
-
-
Siu, K.K.1
Sultana, A.2
Azimi, F.C.3
Lee, J.E.4
-
31
-
-
78649429705
-
Identification of specific determinants of human APOBEC3F, APOBEC3C, and APOBEC3DE and African green monkey APOBEC3F that interact with HIV-1 Vif
-
Smith J.L., Pathak V.K. Identification of specific determinants of human APOBEC3F, APOBEC3C, and APOBEC3DE and African green monkey APOBEC3F that interact with HIV-1 Vif. J. Virol. 2010, 84:12599-12608.
-
(2010)
J. Virol.
, vol.84
, pp. 12599-12608
-
-
Smith, J.L.1
Pathak, V.K.2
-
32
-
-
0002027029
-
A new evolutionary law
-
Van Valen L. A new evolutionary law. Evol. Theory 1973, 1:1-30.
-
(1973)
Evol. Theory
, vol.1
, pp. 1-30
-
-
Van Valen, L.1
-
33
-
-
37049038861
-
Antiretroviral activity and Vif sensitivity of rhesus macaque APOBEC3 proteins
-
Virgen C.A., Hatziioannou T. Antiretroviral activity and Vif sensitivity of rhesus macaque APOBEC3 proteins. J. Virol. 2007, 81:13932-13937.
-
(2007)
J. Virol.
, vol.81
, pp. 13932-13937
-
-
Virgen, C.A.1
Hatziioannou, T.2
-
34
-
-
3242712200
-
A second human antiretroviral factor, APOBEC3F, is suppressed by the HIV-1 and HIV-2 Vif proteins
-
Wiegand H.L., Doehle B.P., Bogerd H.P., Cullen B.R. A second human antiretroviral factor, APOBEC3F, is suppressed by the HIV-1 and HIV-2 Vif proteins. EMBO J. 2004, 23:2451-2458.
-
(2004)
EMBO J.
, vol.23
, pp. 2451-2458
-
-
Wiegand, H.L.1
Doehle, B.P.2
Bogerd, H.P.3
Cullen, B.R.4
-
35
-
-
33646508336
-
Comparative analysis of the antiretroviral activity of APOBEC3G and APOBEC3F from primates
-
Zennou V., Bieniasz P.D. Comparative analysis of the antiretroviral activity of APOBEC3G and APOBEC3F from primates. Virology 2006, 349:31-40.
-
(2006)
Virology
, vol.349
, pp. 31-40
-
-
Zennou, V.1
Bieniasz, P.D.2
-
36
-
-
2442692812
-
Human APOBEC3F is another host factor that blocks human immunodeficiency virus type 1 replication
-
Zheng Y.H., Irwin D., Kurosu T., Tokunaga K., Sata T., Peterlin B.M. Human APOBEC3F is another host factor that blocks human immunodeficiency virus type 1 replication. J. Virol. 2004, 78:6073-6076.
-
(2004)
J. Virol.
, vol.78
, pp. 6073-6076
-
-
Zheng, Y.H.1
Irwin, D.2
Kurosu, T.3
Tokunaga, K.4
Sata, T.5
Peterlin, B.M.6
|