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Volumn 1264, Issue , 1997, Pages 206-223

Trie-based data structures for sequence assembly

Author keywords

[No Author keywords available]

Indexed keywords

DATA STRUCTURES; DNA SEQUENCES; GENE ENCODING; LOGIC PROGRAMMING; PATTERN MATCHING; TREES (MATHEMATICS);

EID: 84948989459     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/3-540-63220-4_61     Document Type: Conference Paper
Times cited : (18)

References (16)
  • 6
    • 0027252551 scopus 로고
    • Artificlal]y generated data sets for testing DNA fragment assembly algorithms
    • M.L. Engle and C. Burks. Artificlal]y generated data sets for testing DNA fragment assembly algorithms. Genomics, 16:286-288, 1993.
    • (1993) Genomics , vol.16 , pp. 286-288
    • Engle, M.L.1    Burks, C.2
  • 7
    • 0003614220 scopus 로고    scopus 로고
    • Genome Center, University of Washington
    • P. Green. Documentation for phrap. Genome Center, University of Washington, http://bozeman.mbt.washington.edu, 1996.
    • (1996) Documentation for Phrap
    • Green, P.1
  • 8
    • 0001468074 scopus 로고
    • Exact and approximate algorithms for the sequence reconstruction problem
    • J. Kececlogiu and E.W. Myers. Exact and approximate algorithms for the sequence reconstruction problem. Algorithmica, 13:5-51, 1995.
    • (1995) Algorithmica , vol.13 , pp. 5-51
    • Kececlogiu, J.1    Myers, E.W.2
  • 10
    • 0002406268 scopus 로고
    • The approximation of maximum subgraph problems
    • C. Lund and M. Yans. The approximation of maximum subgraph problems. In Proc. 20th ICALP, pages 40-51, 1992.
    • (1992) Proc. 20Th ICALP , pp. 40-51
    • Lund, C.1    Yans, M.2
  • 11
    • 0027681165 scopus 로고
    • Suffix arrays: A new method for on-llne string searches
    • U. Manber and E.W. Myers. Suffix arrays: A new method for on-llne string searches. SIAM J. Computing, 22:935-948, 1993.
    • (1993) SIAM J. Computing , vol.22 , pp. 935-948
    • Manber, U.1    Myers, E.W.2
  • 12
    • 0029312158 scopus 로고
    • Towards simplifying and accurateJy formulating fragment assembly
    • E. W. Myers. Towards simplifying and accurateJy formulating fragment assembly. J. Comp. Biol, 2(2):275-290, 1995.
    • (1995) J. Comp. Biol , vol.2 , Issue.2 , pp. 275-290
    • Myers, E.W.1
  • 13
    • 0023989064 scopus 로고
    • Improved took for biological sequence comparison
    • W.R. Pearson and D.J. Lipman. Improved took for biological sequence comparison. In Proc. Natl. Acad. Sci., pages 2444-2448, 1988.
    • (1988) Proc. Natl. Acad. Sci , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 14
    • 0005258725 scopus 로고
    • On approximate solutions for combinatorial optimization problems
    • H. Simon. On approximate solutions for combinatorial optimization problems. SIAM J. Discrete Math., 3:294-310, 1990.
    • (1990) SIAM J. Discrete Math , vol.3 , pp. 294-310
    • Simon, H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.