Arc diagrams: Visualizing structure in strings

Proceedings - IEEE Symposium on Information Visualization, INFO VIS

Volumn 2002-January, Issue , 2002, Pages 110-116

  Wattenberg, M ^a  

^a IBM RESEARCH   (United States)

Author keywords

Autocorrelation; Chaos; Data visualization; Displays; DNA; Frequency; Histograms; Image sequence analysis; Performance analysis; Pixel

Indexed keywords

AUTOCORRELATION; CHAOS THEORY; DISPLAY DEVICES; DNA; INFORMATION ANALYSIS; INFORMATION SCIENCE; INFORMATION SYSTEMS; PIXELS; VISUALIZATION;

COMPLEX PATTERN; DESIGN AND IMPLEMENTATIONS; FREQUENCY; HISTOGRAMS; IMAGE SEQUENCE ANALYSIS; PERFORMANCE ANALYSIS; VISUALIZATION METHOD;

DATA VISUALIZATION;

EID: 84948731890     PISSN: 1522404X     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/INFVIS.2002.1173155     Document Type: Conference Paper

References (11)

1. nd ed. Sinauer Assoc. 2000.
2. Church, K.W., and Helfman, J.I. "Dotplot: A Program for Exploring Self-Similarity in Millions of Lines of Text and Code", Proceedings of the 24th Symposium on the Interface, Computing Science and Statistics V24, pp. 58-67, March, 1992.
3. Hughes, Jason et al., "Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae." Journal of Molecular Biology (2000) 296: 1205-124.
4. E. Hamori and J. Ruskin, "H-Curves, a novel method of representation of nucleotide sequences especially suited for long DNA sequences," Journal of Biological Chemistry, 258 (2):1381-1327, 1983.
5. H. J. Jeffrey. "Chaos game representation of gene structure." Nucleic Acids Research, 18(8):2163-2170, 1990.
6. D. Jerding and J. Stasko. "The Information Mural: A technique for displaying and navigating large information spaces." IEEE Visualization '95 Symposium on Information Visualization, pp 43-50.
7. Schenker, Heinrich, Five graphic music analyses, New York: Dover, 1969
8. Saccharomyces genome database, http://genomewww.stanford.edu/Saccharomyces/ (2002)
9. "TimeSketch." ECS Media. www.ecsmedia.com 2002
10. M. Wattenberg, "The Shape of Song." http://www.turbulence.org/works/Song (2001)
11. D. Wu, J. Roberge, D. J. Cork, B. G. Nguyen and T. Grace, "Computer visualization of long genomic sequences." IEEE Visualization '93, pp. 308-315.