메뉴 건너뛰기




Volumn 6, Issue 7, 2015, Pages

Genome-editing tools for stem cell biology

Author keywords

[No Author keywords available]

Indexed keywords

CRISPR ASSOCIATED PROTEIN; HISTONE ACETYLTRANSFERASE; NUCLEASE; PROTEIN P53; RNA GUIDED DNA SPECIFIC NUCLEASE; TRANSCRIPTION ACTIVATOR LIKE EFFECTOR NUCLEASE; UNCLASSIFIED DRUG; ZINC FINGER PROTEIN; BACTERIAL PROTEIN; BIOLOGICAL MARKER; CAS9 PROTEIN, FRANCISELLA NOVICIDA; ENDONUCLEASE; HOMEODOMAIN PROTEIN; KRUPPEL LIKE FACTOR; KRUPPEL LIKE FACTOR 4; MYC PROTEIN; MYC PROTEIN, HUMAN; OCTAMER TRANSCRIPTION FACTOR 4; POU5F1 PROTEIN, HUMAN; REPRESSOR PROTEIN; SOX2 PROTEIN, HUMAN; TRANSCRIPTION FACTOR SOX;

EID: 84947108021     PISSN: None     EISSN: 20414889     Source Type: Journal    
DOI: 10.1038/cddis.2015.167     Document Type: Review
Times cited : (13)

References (89)
  • 1
    • 0032491416 scopus 로고    scopus 로고
    • Embryonic stem cell lines derived from human blastocysts
    • Thomson JA. Embryonic stem cell lines derived from human blastocysts. Science 1998; 282: 1145-1147.
    • (1998) Science , vol.282 , pp. 1145-1147
    • Thomson, J.A.1
  • 2
    • 33747195353 scopus 로고    scopus 로고
    • Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors
    • Takahashi K, Yamanaka S. Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell 2006; 126: 663-676.
    • (2006) Cell , vol.126 , pp. 663-676
    • Takahashi, K.1    Yamanaka, S.2
  • 3
    • 84907304288 scopus 로고    scopus 로고
    • Small molecule compound induces chromatin de-condensation and facilitates induced pluripotent stem cell generation
    • Wei X, Chen Y, Xu Y, Zhan Y., Zhang R, Wang M et al. Small molecule compound induces chromatin de-condensation and facilitates induced pluripotent stem cell generation. J Mol Cell Biol 2014; 6: 409-420.
    • (2014) J Mol Cell Biol , vol.6 , pp. 409-420
    • Wei, X.1    Chen, Y.2    Xu, Y.3    Zhan, Y.4    Zhang, R.5    Wang, M.6
  • 4
    • 84856152053 scopus 로고    scopus 로고
    • Transcriptional activators and activation mechanisms
    • Ma J. Transcriptional activators and activation mechanisms. Protein Cell 2011; 2: 879-888.
    • (2011) Protein Cell , vol.2 , pp. 879-888
    • Ma, J.1
  • 5
    • 46949085597 scopus 로고    scopus 로고
    • Induction of pluripotent stem cells by defined factors is greatly improved by small-molecule compounds
    • Huangfu D, Maehr R, Guo W, Eijkelenboom A., Snitow M, Chen AE et al. Induction of pluripotent stem cells by defined factors is greatly improved by small-molecule compounds. Nat Biotechnol 2008; 26: 795-797.
    • (2008) Nat Biotechnol , vol.26 , pp. 795-797
    • Huangfu, D.1    Maehr, R.2    Guo, W.3    Eijkelenboom, A.4    Snitow, M.5    Chen, A.E.6
  • 6
    • 84969320446 scopus 로고    scopus 로고
    • The combination of tet1 with oct4 generates high-quality mouse induced pluripotent stem cells (iPSCs)
    • Chen J, Gao Y, Huang H, Xu K., Chen X, Jiang Y et al. The combination of Tet1 with Oct4 generates high-quality mouse induced pluripotent stem cells (iPSCs). Stem Cell 2014;: 1-16.
    • (2014) Stem Cell , pp. 1-16
    • Chen, J.1    Gao, Y.2    Huang, H.3    Xu, K.4    Chen, X.5    Jiang, Y.6
  • 9
    • 44949155482 scopus 로고    scopus 로고
    • Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases
    • Doyon Y, McCammon JM, Miller JC, Faraji F, Ngo C., Katibah GE et al. Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases. Nat Biotechnol 2008; 26: 702-708.
    • (2008) Nat Biotechnol , vol.26 , pp. 702-708
    • Doyon, Y.1    McCammon, J.M.2    Miller, J.C.3    Faraji, F.4    Ngo, C.5    Katibah, G.E.6
  • 11
    • 77749273530 scopus 로고    scopus 로고
    • Generation of knockout rats with X-linked severe combined immunodeficiency (X-SCID) using zinc-finger nucleases
    • Mashimo T, Takizawa A, Voigt B, Yoshimi K., Hiai H, Kuramoto T et al. Generation of knockout rats with X-linked severe combined immunodeficiency (X-SCID) using zinc-finger nucleases. PLoS One 2010; 5: e8870.
    • (2010) PLoS One , vol.5
    • Mashimo, T.1    Takizawa, A.2    Voigt, B.3    Yoshimi, K.4    Hiai, H.5    Kuramoto, T.6
  • 12
    • 80052595740 scopus 로고    scopus 로고
    • Correction for hauschild et al., efficient generation of a biallelic knockout in pigs using zincfinger nucleases
    • Hauschild J, Petersen B, Santiago Y, Queisser A., Carnwath JW, Lucas-hahn A et al. Correction for Hauschild et al., Efficient generation of a biallelic knockout in pigs using zincfinger nucleases. Proc Natl Acad Sci USA 2011; 108: 15010-15010.
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 15010
    • Hauschild, J.1    Petersen, B.2    Santiago, Y.3    Queisser, A.4    Carnwath, J.W.5    Lucas-Hahn, A.6
  • 13
    • 18944373328 scopus 로고    scopus 로고
    • Highly efficient endogenous human gene correction using designed zinc-finger nucleases
    • Urnov FD, Miller JC, Lee Y-L, Beausejour CM, Rock J.M., Augustus S et al. Highly efficient endogenous human gene correction using designed zinc-finger nucleases. Nature 2005; 435: 646-651.
    • (2005) Nature , vol.435 , pp. 646-651
    • Urnov, F.D.1    Miller, J.C.2    Lee, Y.-L.3    Beausejour, C.M.4    Rock, J.M.5    Augustus, S.6
  • 15
    • 79960833952 scopus 로고    scopus 로고
    • Generation of isogenic pluripotent stem cells differing exclusively at two early onset Parkinson point mutations
    • Soldner F, Laganière J, Cheng AW, Hockemeyer D, Gao Q., Alagappan R et al. Generation of isogenic pluripotent stem cells differing exclusively at two early onset Parkinson point mutations. Cell 2011; 146: 318-331.
    • (2011) Cell , vol.146 , pp. 318-331
    • Soldner, F.1    Laganière, J.2    Cheng, A.W.3    Hockemeyer, D.4    Gao, Q.5    Alagappan, R.6
  • 17
    • 80054987997 scopus 로고    scopus 로고
    • Targeted gene correction of α 1-antitrypsin deficiency in induced pluripotent stem cells
    • Yusa K, Rashid ST, Strick-marchand H, Varela I, Liu P., Darche S et al. Targeted gene correction of α 1-antitrypsin deficiency in induced pluripotent stem cells. Nature 2012; 478: 391-394.
    • (2012) Nature , vol.478 , pp. 391-394
    • Yusa, K.1    Rashid, S.T.2    Strick-Marchand, H.3    Varela, I.4    Liu, P.5    Darche, S.6
  • 18
    • 84885780340 scopus 로고    scopus 로고
    • Targeted mutagenesis of arabidopsis thaliana using engineered TAL effector nucleases
    • Christian M, Qi Y, Zhang Y, Voytas DF. Targeted mutagenesis of Arabidopsis thaliana using engineered TAL effector nucleases. G3 (Bethesda) 2013; 3: 1697-1705.
    • (2013) G3 (Bethesda) , vol.3 , pp. 1697-1705
    • Christian, M.1    Qi, Y.2    Zhang, Y.3    Voytas, D.F.4
  • 20
    • 84885667762 scopus 로고    scopus 로고
    • Conditional targeted genome editing using somatically expressed TALENs in C elegans
    • Cheng Z, Yi P, Wang X, Chai Y., Feng G, Yang Y et al. Conditional targeted genome editing using somatically expressed TALENs in C elegans. Nat Biotechnol 2013; 31: 934-937.
    • (2013) Nat Biotechnol , vol.31 , pp. 934-937
    • Cheng, Z.1    Yi, P.2    Wang, X.3    Chai, Y.4    Feng, G.5    Yang, Y.6
  • 21
    • 84866072998 scopus 로고    scopus 로고
    • Highly efficient generation of heritable zebrafish gene mutations using homo- and heterodimeric TALENs
    • Cade L, Reyon D, Hwang WY, Tsai S.Q., Patel S., Khayter C et al. Highly efficient generation of heritable zebrafish gene mutations using homo- and heterodimeric TALENs. Nucleic Acid Res 2012; 40: 8001-8010.
    • (2012) Nucleic Acid Res , vol.40 , pp. 8001-8010
    • Cade, L.1    Reyon, D.2    Hwang, W.Y.3    Tsai, S.Q.4    Patel, S.5    Khayter, C.6
  • 22
    • 84867904873 scopus 로고    scopus 로고
    • Efficient targeted gene disruption in xenopus embryos using engineered transcription activator-like effector nucleases (TALENs)
    • Lei Y, Guo X, Liu Y, Cao Y., Deng Y, Chen X et al. Efficient targeted gene disruption in Xenopus embryos using engineered transcription activator-like effector nucleases (TALENs). Proc Natl Acad Sci USA 2012; 109: 17484-17489.
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 17484-17489
    • Lei, Y.1    Guo, X.2    Liu, Y.3    Cao, Y.4    Deng, Y.5    Chen, X.6
  • 23
    • 84878826580 scopus 로고    scopus 로고
    • High-efficiency and heritable gene targeting in mouse by transcription activator-like effector nucleases
    • Qiu Z, Liu M, Chen Z, Shao Y., Pan H, Wei G et al. High-efficiency and heritable gene targeting in mouse by transcription activator-like effector nucleases. Nucleic Acid Res 2013; 41: e120.
    • (2013) Nucleic Acid Res , vol.41 , pp. e120
    • Qiu, Z.1    Liu, M.2    Chen, Z.3    Shao, Y.4    Pan, H.5    Wei, G.6
  • 25
    • 84881167672 scopus 로고    scopus 로고
    • Generation of RAG 1-and 2-deficient rabbits by embryo microinjection of TALENs
    • Song J, Zhong J, Guo X, Chen Y., Zou Q, Huang J et al. Generation of RAG 1-and 2-deficient rabbits by embryo microinjection of TALENs. Cell Res 2013; 23: 1059-1062.
    • (2013) Cell Res , vol.23 , pp. 1059-1062
    • Song, J.1    Zhong, J.2    Guo, X.3    Chen, Y.4    Zou, Q.5    Huang, J.6
  • 27
    • 84876389220 scopus 로고    scopus 로고
    • Differential integrity of TALE nuclease genes following adenoviral and lentiviral vector gene transfer into human cells
    • Holkers M, Maggio I, Liu J, Janssen J.M., Miselli F., Mussolino C et al. Differential integrity of TALE nuclease genes following adenoviral and lentiviral vector gene transfer into human cells. Nucleic Acids Res 2013; 41: e63.
    • (2013) Nucleic Acids Res , vol.41 , pp. e63
    • Holkers, M.1    Maggio, I.2    Liu, J.3    Janssen, J.M.4    Miselli, F.5    Mussolino, C.6
  • 28
    • 84880287458 scopus 로고    scopus 로고
    • Characterization and DNA-binding specificities of ralstonia TAL-like effectors
    • Li L, Atef A, Piatek A, Ali Z., Piatek M, Aouida M et al. Characterization and DNA-binding specificities of Ralstonia TAL-like effectors. Mol Plant 2013; 6: 1318-1330.
    • (2013) Mol Plant , vol.6 , pp. 1318-1330
    • Li, L.1    Atef, A.2    Piatek, A.3    Ali, Z.4    Piatek, M.5    Aouida, M.6
  • 29
    • 72149090954 scopus 로고    scopus 로고
    • A simple cipher governs DNA recognition by TAL effectors
    • Moscou MJ, Bogdanove AJ. A simple cipher governs DNA recognition by TAL effectors. Science 2009; 326: 1501.
    • (2009) Science , vol.326 , pp. 1501
    • Moscou, M.J.1    Bogdanove, A.J.2
  • 30
  • 31
    • 57349088665 scopus 로고    scopus 로고
    • Photoexcited CRY2 interacts with CIB1 to regulate transcription and floral initiation in arabidopsis
    • Liu H, Yu X, Li K, Klejnot J., Yang H, Lisiero D et al. Photoexcited CRY2 interacts with CIB1 to regulate transcription and floral initiation in Arabidopsis. Science 2008; 322: 1535-1539.
    • (2008) Science , vol.322 , pp. 1535-1539
    • Liu, H.1    Yu, X.2    Li, K.3    Klejnot, J.4    Yang, H.5    Lisiero, D.6
  • 33
    • 34248374277 scopus 로고    scopus 로고
    • A putative RNA-interference-based immune system in prokaryotes: Computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action
    • Makarova KS, Grishin N V, Shabalina SA, Wolf Y.I., Koonin E V. A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol Direct 2006; 1: 7.
    • (2006) Biol Direct , vol.1 , pp. 7
    • Makarova, K.S.1    Grishin, N.V.2    Shabalina, S.A.3    Wolf, Y.I.4    Koonin, E.V.5
  • 34
    • 84865070369 scopus 로고    scopus 로고
    • A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
    • Jinek M, Chylinski K, Fonfara I, Hauer M., Doudna JA, Charpentier E. A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science 2012; 337: 816-821.
    • (2012) Science , vol.337 , pp. 816-821
    • Jinek, M.1    Chylinski, K.2    Fonfara, I.3    Hauer, M.4    Doudna, J.A.5    Charpentier, E.6
  • 35
    • 84874624936 scopus 로고    scopus 로고
    • Targeted genome engineering in human cells with the cas9 RNA-guided endonuclease
    • Cho SW, Kim S, Kim JM, Kim J-S. Targeted genome engineering in human cells with the Cas9 RNA-guided endonuclease. Nat Biotechnol 2013; 31: 230-232.
    • (2013) Nat Biotechnol , vol.31 , pp. 230-232
    • Cho, S.W.1    Kim, S.2    Kim, J.M.3    Kim, J.-S.4
  • 37
    • 84879016248 scopus 로고    scopus 로고
    • CrRNA and tracrRNA guide cas9-mediated DNA interference in streptococcus thermophilus
    • Karvelis T, Gasiunas G, Miksys A, Barrangou R., Horvath P, Siksnys V. crRNA and tracrRNA guide Cas9-mediated DNA interference in Streptococcus thermophilus. RNA Biol 2013; 10: 841-851.
    • (2013) RNA Biol , vol.10 , pp. 841-851
    • Karvelis, T.1    Gasiunas, G.2    Miksys, A.3    Barrangou, R.4    Horvath, P.5    Siksnys, V.6
  • 38
    • 84884663630 scopus 로고    scopus 로고
    • Efficient genome engineering in human pluripotent stem cells using cas9 from neisseria meningitidis
    • Hou Z, Zhang Y, Propson NE, Howden S.E., Chu L-F, Sontheimer EJ et al. Efficient genome engineering in human pluripotent stem cells using Cas9 from Neisseria meningitidis. Proc Natl Acad Sci USA 2013; 110: 15644-9.
    • (2013) Proc Natl Acad Sci USA , vol.110 , pp. 15644-15649
    • Hou, Z.1    Zhang, Y.2    Propson, N.E.3    Howden, S.E.4    Chu, L.-F.5    Sontheimer, E.J.6
  • 39
    • 84886926151 scopus 로고    scopus 로고
    • Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in arabidopsis, tobacco, sorghum and rice
    • Jiang W, Zhou H, Bi H, Fromm M., Yang B, Weeks DP. Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice. Nucleic Acid Res 2013; 41: e188.
    • (2013) Nucleic Acid Res , vol.41 , pp. e188
    • Jiang, W.1    Zhou, H.2    Bi, H.3    Fromm, M.4    Yang, B.5    Weeks, D.P.6
  • 40
    • 84903818736 scopus 로고    scopus 로고
    • Heritable/conditional genome editing in C. Elegans using a CRISPR-Cas9 feeding system
    • Liu P, Long L, Xiong K, Yu B., Chang N, Xiong J-W et al. Heritable/conditional genome editing in C. elegans using a CRISPR-Cas9 feeding system. Cell Res 2014: 1-4.
    • (2014) Cell Res , pp. 1-4
    • Liu, P.1    Long, L.2    Xiong, K.3    Yu, B.4    Chang, N.5    Xiong, J.-W.6
  • 41
    • 84892437994 scopus 로고    scopus 로고
    • Highly efficient targeted mutagenesis of drosophila with the CRISPR/Cas9 system
    • Bassett AR, Tibbit C, Ponting CP, Liu J-L. Highly efficient targeted mutagenesis of Drosophila with the CRISPR/Cas9 system. Cell Rep 2013; 4: 220-228.
    • (2013) Cell Rep , vol.4 , pp. 220-228
    • Bassett, A.R.1    Tibbit, C.2    Ponting, C.P.3    Liu, J.-L.4
  • 43
    • 84969320448 scopus 로고    scopus 로고
    • Multiple genome modifications by the CRISPR/Cas9 system in zebrafish
    • Ota S, Hisano Y, Ikawa Y, Kawahara A. Multiple genome modifications by the CRISPR/Cas9 system in zebrafish. Gene Cell 2014: 1-10.
    • (2014) Gene Cell , pp. 1-10
    • Ota, S.1    Hisano, Y.2    Ikawa, Y.3    Kawahara, A.4
  • 44
    • 84877103949 scopus 로고    scopus 로고
    • Generation of gene-modified mice via cas9/RNA-mediated gene targeting
    • Shen B, Zhang J, Wu H, Wang J., Ma K, Li Z et al. Generation of gene-modified mice via Cas9/RNA-mediated gene targeting. Cell Res 2013; 23: 720-723.
    • (2013) Cell Res , vol.23 , pp. 720-723
    • Shen, B.1    Zhang, J.2    Wu, H.3    Wang, J.4    Ma, K.5    Li, Z.6
  • 45
    • 84883819602 scopus 로고    scopus 로고
    • Heritable gene targeting in the mouse and rat using a CRISPR-Cas system
    • Li D, Qiu Z, Shao Y, Chen Y., Guan Y, Liu M et al. Heritable gene targeting in the mouse and rat using a CRISPR-Cas system. Nat Biotechnol 2013; 31: 681-683.
    • (2013) Nat Biotechnol , vol.31 , pp. 681-683
    • Li, D.1    Qiu, Z.2    Shao, Y.3    Chen, Y.4    Guan, Y.5    Liu, M.6
  • 46
    • 84905905141 scopus 로고    scopus 로고
    • An iCRISPR platform for rapid, multiplexable, and inducible genome editing in human pluripotent stem cells
    • González F., Zhu Z, Shi Z-D, Lelli K, Verma N., Li QV et al. An iCRISPR platform for rapid, multiplexable, and inducible genome editing in human pluripotent stem cells. Cell Stem Cell 2014: 1-12.
    • (2014) Cell Stem Cell , pp. 1-12
    • González, F.1    Zhu, Z.2    Shi, Z.-D.3    Lelli, K.4    Verma, N.5    Li, Q.V.6
  • 47
    • 84890460786 scopus 로고    scopus 로고
    • Cas9 effectormediated regulation of transcription and differentiation in human pluripotent stem cells
    • Kearns N.a., Genga RMJ, Enuameh MS, Garber M, Wolfe S a, Maehr R. Cas9 effectormediated regulation of transcription and differentiation in human pluripotent stem cells. Development 2014; 141: 219-223.
    • (2014) Development , vol.141 , pp. 219-223
    • Kearns, N.A.1    Genga, R.M.J.2    Enuameh, M.S.3    Garber, M.4    Wolfe, S.A.5    Maehr, R.6
  • 48
    • 0025988092 scopus 로고
    • Structure, expression and chromosomal location of the oct-4 gene
    • Young I.Y., Hae-Sook Ha. Structure, expression and chromosomal location of the Oct-4 gene. Mech Dev 1991; 35: 171-179.
    • (1991) Mech Dev , vol.35 , pp. 171-179
    • Young, I.Y.1    Ha, H.-S.2
  • 49
    • 0032582513 scopus 로고    scopus 로고
    • Formation of pluripotent stem cells in the mammalian embryo depends on the POU transcription factor oct4
    • Nichols J, Zevnik B, Anastassiadis K, Niwa H., Klewe-nebenius D, Chambers I et al. Formation of pluripotent stem cells in the mammalian embryo depends on the POU transcription factor Oct4. Cell 1998; 95: 379-391.
    • (1998) Cell , vol.95 , pp. 379-391
    • Nichols, J.1    Zevnik, B.2    Anastassiadis, K.3    Niwa, H.4    Klewe-Nebenius, D.5    Chambers, I.6
  • 50
    • 84969326023 scopus 로고    scopus 로고
    • Molecular mechanism to maintain stem cell renewal of ES cells exogenous signal to maintain ES self-renewal signal transduction of LIF LIF-independent signal
    • Niwa H. Molecular mechanism to maintain stem cell renewal of ES cells exogenous signal to maintain ES self-renewal signal transduction of LIF LIF-independent signal. ESRF 2001; 148: 137-148.
    • (2001) ESRF , vol.148 , pp. 137-148
    • Niwa, H.1
  • 51
    • 84969326025 scopus 로고    scopus 로고
    • Quantitative expression of oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES
    • Niwa H, Miyazaki J, Smith AG. Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES. cells 2000; 24: 2-6.
    • (2000) Cells , vol.24 , pp. 2-6
    • Niwa, H.1    Miyazaki, J.2    Smith, A.G.3
  • 52
    • 84969320494 scopus 로고    scopus 로고
    • Oct-4 control of totipotency and germline
    • Maurizio P, Hans S. Oct-4 control of totipotency and germline. Mol Reprod Dev 2000; 457: 452-457.
    • (2000) Mol Reprod Dev , vol.457 , pp. 452-457
    • Maurizio, P.1    Hans, S.2
  • 53
    • 0029865895 scopus 로고    scopus 로고
    • Germline regulatory element of oct-4 specific for the totipotent cycle of embryonal
    • Yeom Y, II, Fuhrmann G, Ovitt CE, Brehm A, Ohbo K, Gross M et al. Germline regulatory element of Oct-4 specific for the totipotent cycle of embryonal. cells 1996: 881-94.
    • (1996) Cells , pp. 881-894
    • Yeom, Y.1    Fuhrmann, G.2    Ovitt, C.E.3    Brehm, A.4    Ohbo, K.5    Gross, M.6
  • 55
    • 33751092246 scopus 로고    scopus 로고
    • A protein interaction network for pluripotency of embryonic stem cells
    • Wang J, Rao S, Chu J, Shen X., Levasseur DN, Theunissen TW et al. A protein interaction network for pluripotency of embryonic stem cells. Nature 2006; 444: 364-368.
    • (2006) Nature , vol.444 , pp. 364-368
    • Wang, J.1    Rao, S.2    Chu, J.3    Shen, X.4    Levasseur, D.N.5    Theunissen, T.W.6
  • 56
    • 77949881949 scopus 로고    scopus 로고
    • An expanded oct4 interaction network: Implications for stem cell biology, development, and disease
    • Pardo M, Lang B, Yu L, Prosser H., Bradley A, Babu MM et al. An expanded Oct4 interaction network: implications for stem cell biology, development, and disease. Cell Stem Cell 2010; 6: 382-395.
    • (2010) Cell Stem Cell , vol.6 , pp. 382-395
    • Pardo, M.1    Lang, B.2    Yu, L.3    Prosser, H.4    Bradley, A.5    Babu, M.M.6
  • 57
    • 79960098405 scopus 로고    scopus 로고
    • Differential recruitment of methyl CpG-binding domain factors and DNA methyltransferases by the orphan receptor germ cell nuclear factor initiates the repression and silencing of oct4
    • Gu P, Xu X, Le Menuet D, AC-K Chung, Cooney AJ. Differential recruitment of methyl CpG-binding domain factors and DNA methyltransferases by the orphan receptor germ cell nuclear factor initiates the repression and silencing of Oct4. Stem Cells 2011; 29: 1041-1051.
    • (2011) Stem Cells , vol.29 , pp. 1041-1051
    • Gu, P.1    Xu, X.2    Le Menuet, D.3    Chung, A.C.-K.4    Cooney, A.J.5
  • 58
    • 84904720491 scopus 로고    scopus 로고
    • Clinical significance of the stem cell gene oct-4 in cervical cancer
    • Yang Y, Wang Y, Yin C, Li X. Clinical significance of the stem cell gene Oct-4 in cervical cancer. Tumour Biol 2014; 35: 5339-5345.
    • (2014) Tumour Biol , vol.35 , pp. 5339-5345
    • Yang, Y.1    Wang, Y.2    Yin, C.3    Li, X.4
  • 60
    • 77950794030 scopus 로고    scopus 로고
    • Pluripotency factors lin28 and oct4 identify a sub-population of stem cell-like cells in ovarian cancer
    • Peng S, Maihle NJ, Huang Y. Pluripotency factors Lin28 and Oct4 identify a sub-population of stem cell-like cells in ovarian cancer. Oncogene 2010; 29: 2153-2159.
    • (2010) Oncogene , vol.29 , pp. 2153-2159
    • Peng, S.1    Maihle, N.J.2    Huang, Y.3
  • 61
    • 84969313293 scopus 로고    scopus 로고
    • Engineered zinc finger proteins for controlling
    • Baetsevih V.V. Engineered zinc finger proteins for controlling. Stem Cell Fate 2003: 632-637.
    • (2003) Stem Cell Fate , pp. 632-637
    • Baetsevih, V.V.1
  • 62
    • 79960677839 scopus 로고    scopus 로고
    • KAP1 protein: An enigmatic master regulator of the genome
    • Iyengar S, Farnham PJ. KAP1 protein: an enigmatic master regulator of the genome. J Biol Chem 2011; 286: 26267-26276.
    • (2011) J Biol Chem , vol.286 , pp. 26267-26276
    • Iyengar, S.1    Farnham, P.J.2
  • 65
    • 74049139555 scopus 로고    scopus 로고
    • Genomic targets of the KRAB and SCAN domain-containing zinc finger protein 263
    • Frietze S, Lan X, Jin VX, Farnham PJ. Genomic targets of the KRAB and SCAN domain-containing zinc finger protein 263. J Biol Chem 2010; 285: 1393-1403.
    • (2010) J Biol Chem , vol.285 , pp. 1393-1403
    • Frietze, S.1    Lan, X.2    Jin, V.X.3    Farnham, P.J.4
  • 66
    • 84874352327 scopus 로고    scopus 로고
    • Breaking through an epigenetic wall: Re-activation of oct4 by KRAB-containing designer zinc finger transcription factors
    • Juárez-Moreno K., Erices R, Beltran AS, Stolzenburg S, Cuello-Fredes M, Owen GI et al. Breaking through an epigenetic wall: re-activation of Oct4 by KRAB-containing designer zinc finger transcription factors. Epigenetics 2013; 8: 164-176.
    • (2013) Epigenetics , vol.8 , pp. 164-176
    • Juárez-Moreno, K.1    Erices, R.2    Beltran, A.S.3    Stolzenburg, S.4    Cuello-Fredes, M.5    Owen, G.I.6
  • 67
    • 0034999879 scopus 로고    scopus 로고
    • SCAN. Domains MINIREVIEW all in the family: The BTB/POZ, KRAB, and SCAN domains
    • Collins T, Stone JR, Williams AJ, Williams AMYJ. SCAN. Domains MINIREVIEW All in the Family: the BTB/POZ, KRAB, and SCAN Domains. Mol Cell Biol 2001; 21: 3609-3615.
    • (2001) Mol Cell Biol , vol.21 , pp. 3609-3615
    • Collins, T.1    Stone, J.R.2    Williams, A.J.3    Williams, A.M.Y.J.4
  • 68
    • 0037089626 scopus 로고    scopus 로고
    • SETDB1: A novel KAP-1-associated histone H3, lysine 9-specific methyltransferase that contributes to HP1-mediated silencing of euchromatic genes by KRAB zinc-finger proteins
    • Schultz DC, Ayyanathan K, Negorev D, Maul G.G., Rauscher FJ. SETDB1: a novel KAP-1-associated histone H3, lysine 9-specific methyltransferase that contributes to HP1-mediated silencing of euchromatic genes by KRAB zinc-finger proteins. Gene Dev 2002; 16: 919-932.
    • (2002) Gene Dev , vol.16 , pp. 919-932
    • Schultz, D.C.1    Ayyanathan, K.2    Negorev, D.3    Maul, G.G.4    Rauscher, F.J.5
  • 69
    • 84903145575 scopus 로고    scopus 로고
    • Engineered zinc-finger transcription factors activate OCT4 (POU5F1), SOX2, KLF4, c-MYC (MYC) and miR302/367
    • Ji Q, Fischer AL, Brown CR, Eastlund E.R., Dvash T., Zhong B et al. Engineered zinc-finger transcription factors activate OCT4 (POU5F1), SOX2, KLF4, c-MYC (MYC) and miR302/367. Nucleic Acid Res 2014; 42: 6158-6167.
    • (2014) Nucleic Acid Res , vol.42 , pp. 6158-6167
    • Ji, Q.1    Fischer, A.L.2    Brown, C.R.3    Eastlund, E.R.4    Dvash, T.5    Zhong, B.6
  • 70
    • 79751487297 scopus 로고    scopus 로고
    • Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription
    • Zhang F, Cong L, Lodato S, Kosuri S., Church GM, Arlotta P. Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription. Nat Biotechnol 2011; 29: 149-154.
    • (2011) Nat Biotechnol , vol.29 , pp. 149-154
    • Zhang, F.1    Cong, L.2    Lodato, S.3    Kosuri, S.4    Church, G.M.5    Arlotta, P.6
  • 71
    • 84863201964 scopus 로고    scopus 로고
    • Targeted transcriptional activation of silent oct4 pluripotency gene by combining designer TALEs and inhibition of epigenetic modifiers
    • Bultmann S, Morbitzer R, Schmidt CS, Thanisch K, Spada F., Elsaesser J et al. Targeted transcriptional activation of silent oct4 pluripotency gene by combining designer TALEs and inhibition of epigenetic modifiers. Nucleic Acid Res 2012; 40: 5368-5377.
    • (2012) Nucleic Acid Res , vol.40 , pp. 5368-5377
    • Bultmann, S.1    Morbitzer, R.2    Schmidt, C.S.3    Thanisch, K.4    Spada, F.5    Elsaesser, J.6
  • 72
    • 84881336110 scopus 로고    scopus 로고
    • Reprogramming to pluripotency using designer TALE transcription factors targeting enhancers
    • Gao X, Yang J, Tsang JCH, Ooi J, Wu D., Liu P. Reprogramming to pluripotency using designer TALE transcription factors targeting enhancers. Stem Cell Rep 2013; 1: 183-197.
    • (2013) Stem Cell Rep , vol.1 , pp. 183-197
    • Gao, X.1    Yang, J.2    Tsang, J.C.H.3    Ooi, J.4    Wu, D.5    Liu, P.6
  • 73
    • 84898998655 scopus 로고    scopus 로고
    • Direct activation of human and mouse oct4 genes using engineered TALE and cas9 transcription factors
    • Hu J, Lei Y, Wong W-K, Liu S, Lee K-C, He X et al. Direct activation of human and mouse Oct4 genes using engineered TALE and Cas9 transcription factors. Nucleic Acid Res 2014; 42: 4375-4390.
    • (2014) Nucleic Acid Res , vol.42 , pp. 4375-4390
    • Hu, J.1    Lei, Y.2    Wong, W.-K.3    Liu, S.4    Lee, K.-C.5    He, X.6
  • 74
    • 84874687019 scopus 로고    scopus 로고
    • Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression
    • Qi LS, Larson MH, Gilbert L a, Doudna J a, Weissman JS, Arkin AP et al. Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression. Cell 2013; 152: 1173-1183.
    • (2013) Cell , vol.152 , pp. 1173-1183
    • Qi, L.S.1    Larson, M.H.2    Gilbert, L.A.3    Doudna, J.A.4    Weissman, J.S.5    Arkin, A.P.6
  • 75
    • 84880571335 scopus 로고    scopus 로고
    • CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes
    • Gilbert L.a., Larson MH, Morsut L, Liu Z, Brar G a, Torres SE et al. CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes. Cell 2013; 154: 442-451.
    • (2013) Cell , vol.154 , pp. 442-451
    • Gilbert, L.A.1    Larson, M.H.2    Morsut, L.3    Liu, Z.4    Brar, G.A.5    Torres, S.E.6
  • 76
    • 84885180675 scopus 로고    scopus 로고
    • Multiplexed activation of endogenous genes by CRISPR-on, an RNA-guided transcriptional activator system
    • Cheng AW, Wang H, Yang H, Shi L., Katz Y, Theunissen TW et al. Multiplexed activation of endogenous genes by CRISPR-on, an RNA-guided transcriptional activator system. Cell Res 2013; 23: 1163-1171.
    • (2013) Cell Res , vol.23 , pp. 1163-1171
    • Cheng, A.W.1    Wang, H.2    Yang, H.3    Shi, L.4    Katz, Y.5    Theunissen, T.W.6
  • 77
    • 84964313405 scopus 로고    scopus 로고
    • Comparison of TALE designer transcription factors and the CRISPR/dCas9 in regulation of gene expression by targeting enhancers
    • Gao X, Tsang JCH, Gaba F, Wu D., Lu L, Liu P. Comparison of TALE designer transcription factors and the CRISPR/dCas9 in regulation of gene expression by targeting enhancers. Nucleic Acid Res 2014; 14: e155.
    • (2014) Nucleic Acid Res , vol.14 , pp. e155
    • Gao, X.1    Tsang, J.C.H.2    Gaba, F.3    Wu, D.4    Lu, L.5    Liu, P.6
  • 78
  • 81
    • 84899926214 scopus 로고    scopus 로고
    • Endogenous c-myc is essential for p53-induced apoptosis in response to DNA damage in vivo
    • Phesse TJ, Myant KB, Cole AM, Ridgway R.A., Pearson H., Muncan V et al. Endogenous c-Myc is essential for p53-induced apoptosis in response to DNA damage in vivo. Cell Death Differ 2014; 21: 956-966.
    • (2014) Cell Death Differ , vol.21 , pp. 956-966
    • Phesse, T.J.1    Myant, K.B.2    Cole, A.M.3    Ridgway, R.A.4    Pearson, H.5    Muncan, V.6
  • 82
    • 84886794616 scopus 로고    scopus 로고
    • Senescence and aging: The critical roles of p53
    • Rufini A, Tucci P, Celardo I, Melino G. Senescence and aging: the critical roles of p53. Oncogene 2013; 32: 5129-5143.
    • (2013) Oncogene , vol.32 , pp. 5129-5143
    • Rufini, A.1    Tucci, P.2    Celardo, I.3    Melino, G.4
  • 83
    • 84898015237 scopus 로고    scopus 로고
    • PPISURV: A novel bioinformatics tool for uncovering the hidden role of specific genes in cancer survival outcome
    • Antonov AV, Krestyaninova M, Knight RA, Rodchenkov I, Melino G., Barlev NA. PPISURV: a novel bioinformatics tool for uncovering the hidden role of specific genes in cancer survival outcome. Oncogene 2014; 33: 1621-1628.
    • (2014) Oncogene , vol.33 , pp. 1621-1628
    • Antonov, A.V.1    Krestyaninova, M.2    Knight, R.A.3    Rodchenkov, I.4    Melino, G.5    Barlev, N.A.6
  • 84
    • 84886743570 scopus 로고    scopus 로고
    • Lysine-specific modifications of p53: A matter of life and death?
    • Marouco D, Garabadgiu A V, Melino G, Barlev NA. Lysine-specific modifications of p53: a matter of life and death? Oncotarget 2013; 4: 1556-1571.
    • (2013) Oncotarget , vol.4 , pp. 1556-1571
    • Marouco, D.1    Garabadgiu, A.V.2    Melino, G.3    Barlev, N.A.4
  • 86
    • 69349094006 scopus 로고    scopus 로고
    • A p53-mediated DNA damage response limits reprogramming to ensure iPS cell genomic integrity
    • Marión R.M., Strati K, Li H, Murga M., Blanco R, Ortega S et al. A p53-mediated DNA damage response limits reprogramming to ensure iPS cell genomic integrity. Nature 2009; 460: 1149-1153.
    • (2009) Nature , vol.460 , pp. 1149-1153
    • Marión, R.M.1    Strati, K.2    Li, H.3    Murga, M.4    Blanco, R.5    Ortega, S.6
  • 87
    • 84904749034 scopus 로고    scopus 로고
    • Notch inhibition allows oncogene-independent generation of iPS cells
    • Tcw J., TCW J.
    • Ichida JK, Tcw J, TCW J, Williams LA, Carter AC, Shi Y et al. Notch inhibition allows oncogene-independent generation of iPS cells. Nat Chem Biol 2014; 10: 632-639.
    • (2014) Nat Chem Biol , vol.10 , pp. 632-639
    • Ichida, J.K.1    Williams, L.A.2    Carter, A.C.3    Shi, Y.4
  • 88
    • 84906318418 scopus 로고    scopus 로고
    • Inhibition of notch signaling facilitates the differentiation of human-induced pluripotent stem cells into neural stem cells
    • Chen C-Y, Liao W., Lou Y-L, Li Q, Hu B., Wang Y et al. Inhibition of Notch signaling facilitates the differentiation of human-induced pluripotent stem cells into neural stem cells. Mol Cell Biochem 2014; 395: 291-298.
    • (2014) Mol Cell Biochem , vol.395 , pp. 291-298
    • Chen, C.-Y.1    Liao, W.2    Lou, Y.-L.3    Li, Q.4    Hu, B.5    Wang, Y.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.