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Volumn 31, Issue 9, 2015, Pages 1499-1501

The Cyni framework for network inference in Cytoscape

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; COMPUTER PROGRAM; GENE REGULATORY NETWORK;

EID: 84946184414     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btu812     Document Type: Article
Times cited : (9)

References (11)
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  • 2
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  • 3
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    • Mutual information relevance networks: Functional genomic clustering using pairwise entropy measurements
    • Butte, A.J. and Kohane, I.S. (2000) Mutual information relevance networks: functional genomic clustering using pairwise entropy measurements. Pac. Symp. Biocomput., 5, 418-429.
    • (2000) Pac. Symp. Biocomput. , vol.5 , pp. 418-429
    • Butte, A.J.1    Kohane, I.S.2
  • 4
    • 38449101120 scopus 로고    scopus 로고
    • Integration of biological networks and gene expression data using Cytoscape
    • Cline, M.S. et al. (2007) Integration of biological networks and gene expression data using Cytoscape. Nat. Protoc., 2, 2366-2382.
    • (2007) Nat. Protoc. , vol.2 , pp. 2366-2382
    • Cline, M.S.1
  • 5
    • 34249832377 scopus 로고
    • A Bayesian method for the induction of probabilistic networks from data
    • Cooper, G. and Herskovits, E. (1992) A Bayesian method for the induction of probabilistic networks from data. Mach. Learn., 9, 309-347.
    • (1992) Mach. Learn. , vol.9 , pp. 309-347
    • Cooper, G.1    Herskovits, E.2
  • 6
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    • Wisdom of crowds for robust gene network inference
    • Marbach, D. et al. (2012) Wisdom of crowds for robust gene network inference. Nat. Methods, 9, 796-804.
    • (2012) Nat. Methods , vol.9 , pp. 796-804
    • Marbach, D.1
  • 7
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    • ARACNE: An algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context
    • Margolin, A.A. et al. (2006) ARACNE: An algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context. BMC Bioinformatics, 7 (Suppl. 1), S7.
    • (2006) BMC Bioinformatics , vol.7 , pp. S7
    • Margolin, A.A.1
  • 9
    • 0242643743 scopus 로고    scopus 로고
    • A Bayesian missing value estimation method for gene expression profile data
    • Oba, S. et al. (2003) A Bayesian missing value estimation method for gene expression profile data. Bioinformatics, 19, 2088-2096.
    • (2003) Bioinformatics , vol.19 , pp. 2088-2096
    • Oba, S.1
  • 10
    • 84859359130 scopus 로고    scopus 로고
    • Integrated inference and analysis of regulatory networks from multi-level measurements
    • Poultney, C.S. et al. (2012) Integrated inference and analysis of regulatory networks from multi-level measurements. Methods Cell Biol., 110, 19-56.
    • (2012) Methods Cell Biol. , vol.110 , pp. 19-56
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  • 11
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    • Cytoscape: A software environment for integrated models of biomolecular interaction networks
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    • Shannon, P.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.