The immune epitope database (IEDB) 3.0

Nucleic Acids Research

Volumn 43, Issue D1, 2015, Pages D405-D412

  Vita, Randi ^a   Overton, James A ^a   Greenbaum, Jason A ^a   Ponomarenko, Julia ^b   Clark, Jason D ^c   Cantrell, Jason R ^c   Wheeler, Daniel K ^c   Gabbard, Joseph L ^d   Hix, Deborah ^d   Sette, Alessandro ^a   Peters, Bjoern ^a  

^a LA JOLLA INSTITUTE FOR ALLERGY AND IMMUNOLOGY   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c FREDERICK NATIONAL LABORATORY FOR CANCER RESEARCH   (United States)

^d State University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EPITOPE; PROTEIN;

ACCESS TO INFORMATION; ACCURACY; ARTICLE; CONTROLLED STUDY; DATA ANALYSIS SOFTWARE; INFORMATION RETRIEVAL; INFORMATION STORAGE; ONLINE SYSTEM; PRIORITY JOURNAL; PROTEIN DATABASE; PUBLICATION; REFERENCE DATABASE; CHEMISTRY; IMMUNOLOGY; INTERNET;

DATABASES, PROTEIN; EPITOPES; INTERNET; PROTEINS;

EID: 84946076702     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gku938     Document Type: Article

References (12)

1. Roberts, R. J. (2001) PubMed Central: the GenBank of the published literature. Proc. Natl. Acad. Sci. U. S. A., 98, 381-382.
2. Vita, R., Zarebski, L., Greenbaum, J. A., Emami, H., Hoof, I., Salimi, N., Damle, R., Sette, A. and Peters, B. (2010) The immune epitope database 2.0. Nucleic Acids Res., 38, D854-D862.
3. Hastings, J., De Matos, P., Dekker, A., Ennis, M., Harsha, B., Kale, N., Muthukrishnan, V., Owen, G., Turner, S., Williams, M. et al. (2013) The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013. Nucleic Acids Res., 41, D456-D463.
4. Sayers, E. W., Barrett, T., Benson, D. A., Bryant, S. H., Canese, K., Chetvernin, V., Church, D. M., Di Cuccio, M., Edgar, R., Federhen, S. et al. (2009) Database resources of the National Center for Biotechnology Information. Nucleic Acids Res., 37, D5-D15.
5. Benson, D. A., Clark, K., Karsch-Mizrachi, I., Lipman, D. J., Ostell, J. and Sayers, E. W. (2014) GenBank. Nucleic Acids Res., 42, D32-D37.
6. The UniProt Consortium (2014) Activities at the Universal Protein Resource (UniProt). Nucleic Acids Res., 42, D191-D198.
7. Brinkman, R. R., Courtot, M., Derom, D., Fostel, J. M., He, Y., Lord, P., Malone, J., Parkinson, H., Peters, B., Rocca-Serra, P. et al. (2010) Modeling biomedical experimental processes with OBI. J. Biomed. Semantics, 22(Suppl. 1), S1-S7.
8. Schriml, L. M., Arze, C., Nadendla, S., Chang, Y. W., Mazaitis, M., Felix, V., Feng, G. and Kibbe, W. A. (2012) Disease ontology: a backbone for disease semantic integration. Nucleic Acids Res., 40, D940-D946.
9. Rose, P. W., Bi, C., Bluhm, W. F., Christie, C. H., Dimitropoulos, D., Dutta, S., Green, R. K., Goodsell, D. S., Prlic, A., Quesada, M. et al. (2013) The RCSB Protein Data Bank: new resources for research and education. Nucleic Acids Res., 41, D475-D482.
10. Kim, Y., Vaughan, K., Greenbaum, J., Peters, B., Law, M. and Sette, A. (2012) A meta-analysis of the existing knowledge of immunoreactivity against hepatitis C virus (HCV). PLoS One, 7, e38028.
11. Hartson, R. and Pyla, P. S. (2012) Modeling Biomedical Experimental Processes with OBI. Morgan Kaufmann, Burlington, MA.
12. Nielsen, J. (1993) Iterative user-interface design. Computer, 26, 32-41.