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Volumn 5, Issue , 2015, Pages

Soil restoration with organic amendments: Linking cellular functionality and ecosystem processes

Author keywords

[No Author keywords available]

Indexed keywords

ENZYME; SEWAGE; SOIL;

EID: 84946039296     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep15550     Document Type: Article
Times cited : (120)

References (50)
  • 1
    • 0028163643 scopus 로고
    • Land rehabilitation by urban refuse amendments in a semi-Arid environment: Effect on soil chemical properties
    • Albaladejo, J., Stocking, M., Diaz, E. & Castillo, V. Land rehabilitation by urban refuse amendments in a semi-Arid environment: effect on soil chemical properties. Soil Technology 7, 249-260 (1994
    • (1994) Soil Technology , vol.7 , pp. 249-260
    • Albaladejo, J.1    Stocking, M.2    Diaz, E.3    Castillo, V.4
  • 2
    • 0028160474 scopus 로고
    • Microbial activity in soils under mediterranean environmental conditions
    • García, C., Hernández, T. & Costa, F. Microbial activity in soils under Mediterranean environmental conditions. Soil Biol. Biochem. 26, 1185-1191 (1994
    • (1994) Soil Biol. Biochem , vol.26 , pp. 1185-1191
    • García, C.1    Hernández, T.2    Costa, F.3
  • 3
    • 33750109253 scopus 로고    scopus 로고
    • Microbiological degradation index of soils in a semiarid climate
    • Bastida, F., Moreno, J. L., Hernández, T. & García, C. Microbiological degradation index of soils in a semiarid climate. Soil Biol. Biochem. 38, 3463-3473 (2006
    • (2006) Soil Biol. Biochem , vol.38 , pp. 3463-3473
    • Bastida, F.1    Moreno, J.L.2    Hernández, T.3    García, C.4
  • 4
    • 5344280497 scopus 로고    scopus 로고
    • Effect of municipal solid waste compost amendments on soil enzyme activities and bacterial genetic diversity
    • Crecchio, C., Curci, M., Pizzigallo, M. D. R., Ricciuti, P. & Ruggiero, P. Effect of municipal solid waste compost amendments on soil enzyme activities and bacterial genetic diversity. Soil Biol. Biochem. 36, 1595-1605 (2004
    • (2004) Soil Biol. Biochem , vol.36 , pp. 1595-1605
    • Crecchio, C.1    Curci, M.2    Pizzigallo, M.D.R.3    Ricciuti, P.4    Ruggiero, P.5
  • 5
    • 33644853929 scopus 로고    scopus 로고
    • Alteration and resilience of the soil microbial community following compost amendment: Effects of compost level and compost-borne microbial community
    • Saison, C. et al. Alteration and resilience of the soil microbial community following compost amendment: effects of compost level and compost-borne microbial community. Environ. Microbiol. 8, 247-257 (2006
    • (2006) Environ. Microbiol , vol.8 , pp. 247-257
    • Saison, C.1
  • 6
    • 0037343023 scopus 로고    scopus 로고
    • Soil microbial activity after restoration of a semiarid soil by organic amendments
    • Ros, M., Hernández, M. T. & García, C. Soil microbial activity after restoration of a semiarid soil by organic amendments. Soil Biol. Biochem. 35, 463-469 (2003
    • (2003) Soil Biol. Biochem , vol.35 , pp. 463-469
    • Ros, M.1    Hernández, M.T.2    García, C.3
  • 7
    • 15244348129 scopus 로고    scopus 로고
    • Organic manure stimulates biological activity and barley growth in soil subject to secondary salinization
    • Liang, Y., Si, J., Nikolic, M., Peng, Y., Chen, W. & Jiang, Y. Organic manure stimulates biological activity and barley growth in soil subject to secondary salinization. Soil Biol. Biochem. 37, 1185-1195 (2005
    • (2005) Soil Biol. Biochem , vol.37 , pp. 1185-1195
    • Liang, Y.1    Si, J.2    Nikolic, M.3    Peng, Y.4    Chen, W.5    Jiang, Y.6
  • 8
    • 84864337343 scopus 로고    scopus 로고
    • Changes in bacterial community structure of agricultural land due to long-term organic and chemical amendments
    • Chaudhry, V., Rehman, A., Mishra, A., Chauhan, P. S. & Nautiyal, C. S. Changes in bacterial community structure of agricultural land due to long-term organic and chemical amendments. Microb. Ecol. 64, 450-460 (2012
    • (2012) Microb. Ecol , vol.64 , pp. 450-460
    • Chaudhry, V.1    Rehman, A.2    Mishra, A.3    Chauhan, P.S.4    Nautiyal, C.S.5
  • 9
    • 84904819194 scopus 로고    scopus 로고
    • Microbial diversity of a mediterranean soil and its changes after biotransformed dry olive residue amendment
    • Siles, J. A. et al. Microbial diversity of a Mediterranean soil and its changes after biotransformed dry olive residue amendment. Plos One 9, e103035 (2014
    • (2014) Plos One , vol.9 , pp. e103035
    • Siles, J.A.1
  • 10
    • 84877338299 scopus 로고    scopus 로고
    • Metaproteomics: Harnessing the power of high performance mass spectrometry to identify the suite of proteins that control metabolic activities in microbial communities
    • Hettich, R. L., Pan, C., Chourey, K. & Giannone, R. J. Metaproteomics: harnessing the power of high performance mass spectrometry to identify the suite of proteins that control metabolic activities in microbial communities. Anal. Chem. 85, 4203-4214 (2013
    • (2013) Anal. Chem , vol.85 , pp. 4203-4214
    • Hettich, R.L.1    Pan, C.2    Chourey, K.3    Giannone, R.J.4
  • 11
    • 78649854658 scopus 로고    scopus 로고
    • Direct cellular lysis/protein extraction protocol for soil metaproteomics
    • Chourey, K. et al. Direct cellular lysis/protein extraction protocol for soil metaproteomics. J. Proteome Res. 9, 6615-6622 (2010
    • (2010) J. Proteome Res , vol.9 , pp. 6615-6622
    • Chourey, K.1
  • 12
    • 84862329704 scopus 로고    scopus 로고
    • Soil metaproteomics-comparative evaluation of protein extraction protocols
    • Keiblinger, K. M. et al. Soil metaproteomics-Comparative evaluation of protein extraction protocols. Soil Biol. Biochem. 54, 14-24 (2012
    • (2012) Soil Biol. Biochem , vol.54 , pp. 14-24
    • Keiblinger, K.M.1
  • 13
    • 84894548607 scopus 로고    scopus 로고
    • Metaproteomics of soils from semiarid environment: Functional and phylogenetic information obtained with different protein extraction methods
    • Bastida, F., Hernández, T. & García, C. Metaproteomics of soils from semiarid environment: Functional and phylogenetic information obtained with different protein extraction methods. J. Proteomics 101, 31-42 (2014
    • (2014) J. Proteomics , vol.101 , pp. 31-42
    • Bastida, F.1    Hernández, T.2    García, C.3
  • 14
    • 84946054629 scopus 로고    scopus 로고
    • Exploring the functional soil-microbe interface and exoenzymes through soil metaexoproteomics
    • in press
    • Johnson-Rollings, A. S. et al. Exploring the functional soil-microbe interface and exoenzymes through soil metaexoproteomics. ISME J., in press (2015
    • (2015) ISME J
    • Johnson-Rollings, A.S.1
  • 15
    • 33947236971 scopus 로고    scopus 로고
    • Toward an ecological classification of soil bacteria
    • Fierer, N., Bradford, M. A. & Jackson, R. B. Toward an ecological classification of soil bacteria. Ecology 88, 1354-1364 (2007
    • (2007) Ecology , vol.88 , pp. 1354-1364
    • Fierer, N.1    Bradford, M.A.2    Jackson, R.B.3
  • 16
    • 0004249702 scopus 로고
    • Second edition. John Wiley and Sons, New York, New York, USA. Thornthwaite C
    • Tate, R. Soil Microbiology. Second edition. John Wiley and Sons, New York, New York, USA. Thornthwaite, C 1948 (2000
    • (1948) Soil Microbiology
    • Tate, R.1
  • 17
    • 50949105823 scopus 로고    scopus 로고
    • Application of fresh and composted organic wastes modifies structure, size and activity of soil microbial community under semiarid climate, appl
    • Bastida, F. et al. Application of fresh and composted organic wastes modifies structure, size and activity of soil microbial community under semiarid climate, Appl. Soil Ecol. 40, 318-329 (2008
    • (2008) Soil Ecol , vol.40 , pp. 318-329
    • Bastida, F.1
  • 18
    • 84890387941 scopus 로고    scopus 로고
    • Bacterial growth efficiency in soils under different land management practices
    • Lee, Z. M. & Schmidt, T. M. Bacterial growth efficiency in soils under different land management practices. Soil Biol. Biochem. 69, 282-290 (2014
    • (2014) Soil Biol. Biochem , vol.69 , pp. 282-290
    • Lee, Z.M.1    Schmidt, T.M.2
  • 19
    • 0027974467 scopus 로고
    • Effect of fungal and bacterial biomass ratio on the relationship between co2 evolution and total soil microbial biomass
    • Sakamoto, K. & Oba, Y. Effect of fungal and bacterial biomass ratio on the relationship between CO2 evolution and total soil microbial biomass. Biol. Fertil. Soils 17, 39-44 (1994
    • (1994) Biol. Fertil. Soils , vol.17 , pp. 39-44
    • Sakamoto, K.1    Oba, Y.2
  • 20
    • 33645080167 scopus 로고    scopus 로고
    • Bacterial and fungal contributions to carbon sequestration in agroecosystems
    • Six, J., Frey, S. D., Thiet, R. K. & Batten, K. M. Bacterial and fungal contributions to carbon sequestration in agroecosystems. Soil Sci. Soc. America J. 70, 555-569 (2006
    • (2006) Soil Sci. Soc. America J , vol.70 , pp. 555-569
    • Six, J.1    Frey, S.D.2    Thiet, R.K.3    Batten, K.M.4
  • 21
    • 33645240962 scopus 로고    scopus 로고
    • Do growth yield efficiencies differ between soil microbial communities differing in fungal: Bacterial ratios? Reality check and methodological issues
    • Thiet, R. K., Frey, S. D. & Six, J. Do growth yield efficiencies differ between soil microbial communities differing in fungal: bacterial ratios? Reality check and methodological issues. Soil Biol. Biochem. 38, 837-844 (2006
    • (2006) Soil Biol. Biochem , vol.38 , pp. 837-844
    • Thiet, R.K.1    Frey, S.D.2    Six, J.3
  • 22
    • 84876294242 scopus 로고    scopus 로고
    • Empirical evidence that soil carbon formation from plant inputs is positively related to microbial growth
    • Bradford, M. A., Keiser, A. D., Davies, C. A., Mersmann, C. A. & Strickland, M. S. Empirical evidence that soil carbon formation from plant inputs is positively related to microbial growth. Biogeochemistry 113, 271-281 (2013
    • (2013) Biogeochemistry , vol.113 , pp. 271-281
    • Bradford, M.A.1    Keiser, A.D.2    Davies, C.A.3    Mersmann, C.A.4    Strickland, M.S.5
  • 23
    • 84864337343 scopus 로고    scopus 로고
    • Changes in bacterial community structure of agricultural land due to long-term organic and chemical amendments
    • Chaudhry, V., Rehman, A., Mishra, A., Chauhan, P. S. & Nautiyal, C. S. Changes in bacterial community structure of agricultural land due to long-term organic and chemical amendments. Microb. Ecol. 64, 450-460 (2012
    • (2012) Microb. Ecol , vol.64 , pp. 450-460
    • Chaudhry, V.1    Rehman, A.2    Mishra, A.3    Chauhan, P.S.4    Nautiyal, C.S.5
  • 24
    • 84905280861 scopus 로고    scopus 로고
    • Soil carbon quality and nitrogen fertilization structure bacterial communities with predictable responses of major bacterial phyla
    • Cederlund, H. et al. Soil carbon quality and nitrogen fertilization structure bacterial communities with predictable responses of major bacterial phyla. Applied Soil Ecol. 84, 62-68 (2014
    • (2014) Applied Soil Ecol , vol.84 , pp. 62-68
    • Cederlund, H.1
  • 25
    • 84878739632 scopus 로고    scopus 로고
    • Phylogenetic and functional changes in the microbial community of longterm restored soils under semiarid climate
    • Bastida, F., Hernández, T., Albaladejo, J. & García, C. Phylogenetic and functional changes in the microbial community of longterm restored soils under semiarid climate. Soil Biol. Biochem. 65, 12-21 (2013
    • (2013) Soil Biol. Biochem , vol.65 , pp. 12-21
    • Bastida, F.1    Hernández, T.2    Albaladejo, J.3    García, C.4
  • 26
    • 84905119356 scopus 로고    scopus 로고
    • Predicting the responsiveness of soil biodiversity to deforestation: A cross-biome study
    • Crowther, T. W. et al. Predicting the responsiveness of soil biodiversity to deforestation: a cross-biome study. Global Change Biol. 20, 2983-2994 (2014
    • (2014) Global Change Biol , vol.20 , pp. 2983-2994
    • Crowther, T.W.1
  • 27
    • 78751503817 scopus 로고    scopus 로고
    • Soil biodiversity and carbon cycling: A review and synthesis of studies examining diversity-function relationships
    • Nielsen, U. N., Ayres, E., Wall, D. H. & Bardgett, R. D. Soil biodiversity and carbon cycling: a review and synthesis of studies examining diversity-function relationships. Eur. J. Soil Sci. 62, 105-116 (2011
    • (2011) Eur. J. Soil Sci , vol.62 , pp. 105-116
    • Nielsen, U.N.1    Ayres, E.2    Wall, D.H.3    Bardgett, R.D.4
  • 28
    • 84859911168 scopus 로고    scopus 로고
    • Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients
    • Fierer, N. et al. Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients. ISME J. 6, 1007-1017 (2012
    • (2012) ISME J , vol.6 , pp. 1007-1017
    • Fierer, N.1
  • 29
    • 84908278852 scopus 로고    scopus 로고
    • Abiotic stress tolerance and competition-related traits underlie phylogenetic clustering in soil bacterial communities
    • Goberna, M., Navarro-Cano, J. A., Valiente-Nauet, A., García, C. & Verdú, M. Abiotic stress tolerance and competition-related traits underlie phylogenetic clustering in soil bacterial communities. Ecol. Lett. 17, 1191-1201 (2014
    • (2014) Ecol. Lett , vol.17 , pp. 1191-1201
    • Goberna, M.1    Navarro-Cano, J.A.2    Valiente-Nauet, A.3    García, C.4    Verdú, M.5
  • 30
    • 77950560411 scopus 로고    scopus 로고
    • Vegetation affects the relative abundances of dominant soil bacterial taxa and soil respiration rates in an upland grassland soil
    • Thomson, B. C. et al. Vegetation affects the relative abundances of dominant soil bacterial taxa and soil respiration rates in an upland grassland soil. Microb. Ecol. 59, 335-343 (2010
    • (2010) Microb. Ecol , vol.59 , pp. 335-343
    • Thomson, B.C.1
  • 31
    • 33947232804 scopus 로고    scopus 로고
    • Increases in soil respiration following labile carbon additions linked to rapid shifts in soil microbial community composition
    • Cleveland, C. C., Nermegut, D. R., Schmidt, S. K. & Townsend, A. R. Increases in soil respiration following labile carbon additions linked to rapid shifts in soil microbial community composition. Biogeochemistry 82, 229-240 (2007
    • (2007) Biogeochemistry , vol.82 , pp. 229-240
    • Cleveland, C.C.1    Nermegut, D.R.2    Schmidt, S.K.3    Townsend, A.R.4
  • 32
    • 84455170926 scopus 로고    scopus 로고
    • Bacterial community structure and function change in association with colonizer plants during early primary succession in a glacier forefield
    • Knelman, J. E. et al. Bacterial community structure and function change in association with colonizer plants during early primary succession in a glacier forefield. Soil Biol. Biochem. 46, 172-180 (2012
    • (2012) Soil Biol. Biochem , vol.46 , pp. 172-180
    • Knelman, J.E.1
  • 33
    • 33747479446 scopus 로고    scopus 로고
    • Archaea predominate among ammonia-oxidizing prokaryotes in soils
    • Leininger, S. et al. Archaea predominate among ammonia-oxidizing prokaryotes in soils. Nature 442, 806-809 (2006
    • (2006) Nature , vol.442 , pp. 806-809
    • Leininger, S.1
  • 34
    • 58749083194 scopus 로고    scopus 로고
    • Role of amendments on n cycling in mediterranean abandoned semiarid soils
    • Bastida, F. et al. Role of amendments on N cycling in Mediterranean abandoned semiarid soils. Applied Soil Ecol. 41, 195-205 (2009
    • (2009) Applied Soil Ecol , vol.41 , pp. 195-205
    • Bastida, F.1
  • 35
    • 0034074410 scopus 로고    scopus 로고
    • Rrna operon copy number reflects ecological strategies of bacteria
    • Klappenbach, J. A., Dunbar, J. M. & Schmidt, T. M. rRNA operon copy number reflects ecological strategies of bacteria. Appl. Environ. Microbiol. 66, 1328-1333 (2000
    • (2000) Appl. Environ. Microbiol , vol.66 , pp. 1328-1333
    • Klappenbach, J.A.1    Dunbar, J.M.2    Schmidt, T.M.3
  • 36
    • 80053569422 scopus 로고    scopus 로고
    • Differential growth responses of soil bacterial taxa to carbon substrates of varying chemical recalcitrance
    • Goldfarb, K. C. et al. Differential growth responses of soil bacterial taxa to carbon substrates of varying chemical recalcitrance. Front. Microbiol. 2, 1-10 (2011
    • (2011) Front. Microbiol , vol.2 , pp. 1-10
    • Goldfarb, K.C.1
  • 37
    • 49249124904 scopus 로고    scopus 로고
    • The influence of soil properties on the structure of bacterial and fungal communities across land-use types
    • Lauber, C. L., Strickland, M. S., Bradford, M. A. & Fierer, N. The influence of soil properties on the structure of bacterial and fungal communities across land-use types. Soil Biol. Biochem. 40, 2407-2415 (2008
    • (2008) Soil Biol. Biochem , vol.40 , pp. 2407-2415
    • Lauber, C.L.1    Strickland, M.S.2    Bradford, M.A.3    Fierer, N.4
  • 38
    • 0035344248 scopus 로고    scopus 로고
    • Diversity and seasonal fluctuations of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methods
    • Smit, E. et al. Diversity and seasonal fluctuations of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methods. Appl. Environ. Microbiol. 67, 2284-2291 (2001
    • (2001) Appl. Environ. Microbiol , vol.67 , pp. 2284-2291
    • Smit, E.1
  • 39
    • 78650187493 scopus 로고    scopus 로고
    • Plot-scale manipulations of organic matter inputs to soils correlate with shifts in microbial community composition in a lowland tropical rain forest
    • Nermegut, D. R., Cleveland, C. C., Wieder, W. R., Washenberger, C. L. & Townsend, A. R. Plot-scale manipulations of organic matter inputs to soils correlate with shifts in microbial community composition in a lowland tropical rain forest. Soil Biol. Biochem. 42, 2153-2160 (2010
    • (2010) Soil Biol. Biochem , vol.42 , pp. 2153-2160
    • Nermegut, D.R.1    Cleveland, C.C.2    Wieder, W.R.3    Washenberger, C.L.4    Townsend, A.R.5
  • 40
    • 33746077722 scopus 로고    scopus 로고
    • Diversity of planctomycetes in soil in relation soil history and environmental heterogeneity
    • Buckley, D. H., Huanyuitham, V., Nelson, T. A., Rumberg, A. & Thies, J. E. Diversity of Planctomycetes in soil in relation soil history and environmental heterogeneity. Appl. Environ. Microbiol. 72, 4522-4531 (2006
    • (2006) Appl. Environ. Microbiol , vol.72 , pp. 4522-4531
    • Buckley, D.H.1    Huanyuitham, V.2    Nelson, T.A.3    Rumberg, A.4    Thies, J.E.5
  • 42
    • 84901378880 scopus 로고    scopus 로고
    • Characterization of the microbial community in biological soil crusts dominated by fulgensia desertorum (tomin) poelt and squamarina cartilaginea (with.) p. James and in the underlying soil
    • Bastida, F. et al. Characterization of the microbial community in biological soil crusts dominated by Fulgensia desertorum (Tomin) Poelt and Squamarina cartilaginea (With.) P. James and in the underlying soil. Soil Biol. Biochem. 76, 70-79 (2014
    • (2014) Soil Biol. Biochem , vol.76 , pp. 70-79
    • Bastida, F.1
  • 43
    • 33748906730 scopus 로고    scopus 로고
    • Activities of extracellular enzymes in physically isolated fractions of restored grassland soils
    • Allison, S. D. & Jastrow, J. D. Activities of extracellular enzymes in physically isolated fractions of restored grassland soils. Soil Biol. Biochem. 38, 3245-3256 (2006
    • (2006) Soil Biol. Biochem , vol.38 , pp. 3245-3256
    • Allison, S.D.1    Jastrow, J.D.2
  • 45
    • 0028175660 scopus 로고
    • Colorimetric determination of reducing sugars in soil
    • Deng, S. P. & Tabatabai, M. A. Colorimetric determination of reducing sugars in soil. Soil Biol. Biochem. 26, 473-477 (1994
    • (1994) Soil Biol. Biochem , vol.26 , pp. 473-477
    • Deng, S.P.1    Tabatabai, M.A.2
  • 46
    • 33845261493 scopus 로고
    • A rapid method for total lipid extraction and purification
    • Bligh, E. G. & Dyer, W. J. A rapid method for total lipid extraction and purification. Can. J. Biochem. Physiol. 37, 911-917 (1959
    • (1959) Can. J. Biochem. Physiol , vol.37 , pp. 911-917
    • Bligh, E.G.1    Dyer, W.J.2
  • 47
    • 0027484760 scopus 로고
    • Phospholipid fatty-Acid composition, biomass, and activity of microbial communities from 2 soil types experimentally exposed to different heavy-metals
    • Frostegard, A., Tunlid, A. & Baath, E. Phospholipid fatty-Acid composition, biomass, and activity of microbial communities from 2 soil types experimentally exposed to different heavy-metals. Appl. Environ. Microbiol. 59, 3606-3617 (1993
    • (1993) Appl. Environ. Microbiol , vol.59 , pp. 3606-3617
    • Frostegard, A.1    Tunlid, A.2    Baath, E.3
  • 48
    • 67349266694 scopus 로고    scopus 로고
    • Universal sample preparation method for proteome analysis
    • Wisniewski, J. et al. Universal sample preparation method for proteome analysis. Nat. Meth. 6, 359-362 (2009
    • (2009) Nat. Meth , vol.6 , pp. 359-362
    • Wisniewski, J.1
  • 49
    • 79959744012 scopus 로고    scopus 로고
    • Structure and function of the symbiosis partners of the lung lichen (lobaria pulmonaria l. Hoffm.) analyzed by metaproteomics
    • Schneider, T. et al. Structure and function of the symbiosis partners of the lung lichen (Lobaria pulmonaria L. Hoffm.) analyzed by metaproteomics. Proteomics 11, 2752-2756 (2011
    • (2011) Proteomics , vol.11 , pp. 2752-2756
    • Schneider, T.1
  • 50
    • 33748319353 scopus 로고    scopus 로고
    • Statistical analysis of membrane proteome expression changes in saccharomyces cerevisiae
    • Zybailov, B. et al. Statistical analysis of membrane proteome expression changes in Saccharomyces cerevisiae. J. Proteome Res. 5, 2339-2347 (2006
    • (2006) J. Proteome Res , vol.5 , pp. 2339-2347
    • Zybailov, B.1


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