Patterns of Micronuclear genes in ciliates

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 2340, Issue , 2002, Pages 279-289

  Ehrenfeucht, Andrzej ^a   Harju, Tero ^b   Petre, Ion ^b   Rozenberg, Grzegorz ^a,c  

^a UCB 450   (United States)

^b TURKU CENTRE FOR COMPUTER SCIENCE   (Finland)

^c LEIDEN UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

CALCULATIONS; DNA;

COMPLEXITY MEASURES; DNA-COMPUTING; GENE ASSEMBLY; IN-VIVO; MICRONUCLEAR GENES; MOLECULAR OPERATIONS;

GENES;

EID: 84944897516     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/3-540-48017-x_26     Document Type: Conference Paper

References (12)

1. Ehrenfeucht, A., Harju, T., Petre, I., Prescott, D.M., and Rozenberg, G., Formal systems for gene assembly in ciliates, to appear in Theoret. Comput. Sci. (2001).
2. Ehrenfeucht, A., Harju, T., Petre, I., Prescott, D.M., and Rozenberg, G., Patterns of micronuclear genes in ciliates, manuscript.
3. Ehrenfeucht, A., Petre, I., Prescott, D. M., and Rozenberg, G., Universal and simple operations for gene assembly in ciliates, in C. Martin-Vide and V. Mitrana (eds.) Where Mathematics, Computer Science, Linguistics and Biology Meet, Kluwer Academic Publishers, Dordrecht/Boston, 329–342 (2001).
4. Ehrenfeucht, A., Petre, I., Prescott, D.M., and Rozenberg, G., String and graph reduction systems for gene assembly in ciliates, to appear in Math. Struct. in Comput. Sci. (2001).
5. Ehrenfeucht, A., Petre, I., Prescott, D.M., and Rozenberg, G., Circular gene assembly in ciliates, manuscript (2001).
6. Ehrenfeucht, A., Prescott, D.M., and Rozenberg, G., Computational aspects of gene (un)scrambling in ciliates. In Evolution as Computation, L. Landweber and E. Winfree (eds.), 45–86, Springer Verlag, Berlin, Heidelberg (2001).
7. Landweber, L.F. and Kari, L., The evolution of cellular computing: nature’s solution to a computational problem. Proceedings of the 4th DIMACS meeting on DNA based computers, Philadelphia, 3–15 (1998).
8. Landweber, L.F. and Kari, L., Universal molecular computation in ciliates. In Evolution as Computation, Landweber, L. and Winfree, E. (eds.), Springer Verlag, Berlin, Heidelberg, to appear (1999).
9. Prescott, D.M., Cutting, splicing, reordering, and elimination of DNA sequences in Hypotrichous ciliates. BioEssays, 14 (5): 317–324 (1992).
10. Prescott, D.M., The unusual organization and processing of genomic DNA in Hypotrichous ciliates. Trends in Genet. 8:439–445 (1992).
11. Prescott, D.M. and DuBois, M., Internal eliminated segments (IESs) of Oxytrichidae, J. Eukariot. Microbiol. 43, 432–441 (1996).
12. Prescott, D.M., Ehrenfeucht, A., and Rozenberg, G., Molecular operations for DNA processing in Hypotrichous ciliates, to appear in European Journal of Protistology (2001).