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Volumn 96, Issue 10, 2015, Pages 3090-3098

Phylogenomic evidence for recombination of adenoviruses in wild gorillas

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CENTRAL AFRICA; CHIMPANZEE; DNA BASE COMPOSITION; GENE LOCUS; GENOMIC FRAGMENT; GORILLA; HUMAN; HUMAN ADENOVIRUS B; MACACA FASCICULARIS; MOLECULAR PHYLOGENY; NEXT GENERATION SEQUENCING; NONHUMAN; PHYLOGENETIC TREE; PHYLOGENOMICS; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; VIRUS GENOME; VIRUS TRANSMISSION; ADENOVIRIDAE; ADENOVIRUS INFECTION; AFRICA; ANIMAL; APE DISEASE; CHEMISTRY; CLASSIFICATION; CLUSTER ANALYSIS; DNA SEQUENCE; GENETIC RECOMBINATION; GENETIC VARIABILITY; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; PHYLOGENY; SEQUENCE HOMOLOGY; VETERINARY; VIROLOGY;

EID: 84944810381     PISSN: 00221317     EISSN: 14652099     Source Type: Journal    
DOI: 10.1099/jgv.0.000250     Document Type: Article
Times cited : (11)

References (39)
  • 1
    • 34247585475 scopus 로고    scopus 로고
    • Comparative seroprevalence and immunogenicity of six rare serotype recombinant adenovirus vaccine vectors from subgroups B and D
    • other authors
    • Abbink, P., Lemckert, A. A., Ewald, B. A., Lynch, D. M., Denholtz, M., Smits, S., Holterman, L., Damen, I., Vogels, R. & other authors (2007). Comparative seroprevalence and immunogenicity of six rare serotype recombinant adenovirus vaccine vectors from subgroups B and D. J Virol 81, 4654–4663
    • (2007) J Virol , vol.81 , pp. 4654-4663
    • Abbink, P.1    Lemckert, A.A.2    Ewald, B.A.3    Lynch, D.M.4    Denholtz, M.5    Smits, S.6    Holterman, L.7    Damen, I.8    Vogels, R.9
  • 3
    • 0037270315 scopus 로고    scopus 로고
    • AVID: A global alignment program
    • Bray, N., Dubchak, I. & Pachter, L. (2003). AVID: a global alignment program. Genome Res 13, 97–102
    • (2003) Genome Res , vol.13 , pp. 97-102
    • Bray, N.1    Dubchak, I.2    Pachter, L.3
  • 4
    • 79960965049 scopus 로고    scopus 로고
    • Cross-species transmission of a novel adenovirus associated with a fulminant pneumonia outbreak in a New World monkey colony
    • other authors
    • Chen, E. C., Yagi, S., Kelly, K. R., Mendoza, S. P., Tarara, R. P., Canfield, D. R., Maninger, N., Rosenthal, A., Spinner, A. & other authors (2011). Cross-species transmission of a novel adenovirus associated with a fulminant pneumonia outbreak in a New World monkey colony. PLoS Pathog 7, e1002155
    • (2011) Plos Pathog , vol.7
    • Chen, E.C.1    Yagi, S.2    Kelly, K.R.3    Mendoza, S.P.4    Tarara, R.P.5    Canfield, D.R.6    Maninger, N.7    Rosenthal, A.8    Spinner, A.9
  • 5
    • 84880056702 scopus 로고    scopus 로고
    • A novel adenovirus species associated with an acute respiratory outbreak in a baboon colony and evidence of coincident human infection
    • other authors
    • Chiu, C. Y., Yagi, S., Lu, X., Yu, G., Chen, E. C., Liu, M., Dick, E. J. Jr, Carey, K. D., Erdman, D. D. & other authors (2013). A novel adenovirus species associated with an acute respiratory outbreak in a baboon colony and evidence of coincident human infection. MBio 4, e00084
    • (2013) Mbio , vol.4
    • Chiu, C.Y.1    Yagi, S.2    Lu, X.3    Yu, G.4    Chen, E.C.5    Liu, M.6    Dick, E.J.7    Carey, K.D.8    Erdman, D.D.9
  • 6
    • 84864453108 scopus 로고    scopus 로고
    • JModelTest 2: More models, new heuristics and parallel computing
    • Darriba, D., Taboada, G. L., Doallo, R. & Posada, D. (2012). jModelTest 2: more models, new heuristics and parallel computing. Nat Methods 9, 772
    • (2012) Nat Methods , vol.9
    • Darriba, D.1    Taboada, G.L.2    Doallo, R.3    Posada, D.4
  • 7
    • 84885235459 scopus 로고    scopus 로고
    • Simian adenovirus type 35 has a recombinant genome comprising human and simian adenovirus sequences, which predicts its potential emergence as a human respiratory pathogen
    • Dehghan, S., Seto, J., Jones, M. S., Dyer, D. W., Chodosh, J. & Seto, D. (2013a). Simian adenovirus type 35 has a recombinant genome comprising human and simian adenovirus sequences, which predicts its potential emergence as a human respiratory pathogen. Virology 447, 265–273
    • (2013) Virology , vol.447 , pp. 265-273
    • Dehghan, S.1    Seto, J.2    Jones, M.S.3    Dyer, D.W.4    Chodosh, J.5    Seto, D.6
  • 8
    • 84880790481 scopus 로고    scopus 로고
    • Computational analysis of four human adenovirus type 4 genomes reveals molecular evolution through two interspecies recombination events
    • Dehghan, S., Seto, J., Liu, E. B., Walsh, M. P., Dyer, D. W., Chodosh, J. & Seto, D. (2013b). Computational analysis of four human adenovirus type 4 genomes reveals molecular evolution through two interspecies recombination events. Virology 443, 197–207
    • (2013) Virology , vol.443 , pp. 197-207
    • Dehghan, S.1    Seto, J.2    Liu, E.B.3    Walsh, M.P.4    Dyer, D.W.5    Chodosh, J.6    Seto, D.7
  • 12
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon, S. & Gascuel, O. (2003). A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52, 696–704
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 13
    • 77950806408 scopus 로고    scopus 로고
    • New algorithms and methods to estimate maximum-likelihood phylogenies: Assessing the performance of PhyML 3.0
    • Guindon, S., Dufayard, J. F., Lefort, V., Anisimova, M., Hordijk, W. & Gascuel, O. (2010). New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59, 307–321
    • (2010) Syst Biol , vol.59 , pp. 307-321
    • Guindon, S.1    Dufayard, J.F.2    Lefort, V.3    Anisimova, M.4    Hordijk, W.5    Gascuel, O.6
  • 15
    • 77953719476 scopus 로고    scopus 로고
    • Molecular epidemiology and brief history of emerging adenovirus 14-associated respiratory disease in the United States
    • Kajon, A. E., Lu, X., Erdman, D. D., Louie, J., Schnurr, D., George, K. S., Koopmans, M. P., Allibhai, T. & Metzgar, D. (2010). Molecular epidemiology and brief history of emerging adenovirus 14-associated respiratory disease in the United States. J Infect Dis 202, 93–103
    • (2010) J Infect Dis , vol.202 , pp. 93-103
    • Kajon, A.E.1    Lu, X.2    Erdman, D.D.3    Louie, J.4    Schnurr, D.5    George, K.S.6    Koopmans, M.P.7    Allibhai, T.8    Metzgar, D.9
  • 17
    • 0035180289 scopus 로고    scopus 로고
    • Genome analysis of adenovirus type 7 and adenovirus type 11
    • Kitamura, N. (2001). Genome analysis of adenovirus type 7 and adenovirus type 11. Jpn J Ophthalmol 45, 22–30
    • (2001) Jpn J Ophthalmol , vol.45 , pp. 22-30
    • Kitamura, N.1
  • 18
    • 84890881385 scopus 로고    scopus 로고
    • Field immobilization for treatment of an unknown illness in a wild chimpanzee (Pan troglodytes schweinfurthii) at Gombe National Park, Tanzania: Findings, challenges, and lessons learned
    • other authors
    • Lonsdorf, E., Travis, D., Ssuna, R., Lantz, E., Wilson, M., Gamble, K., Terio, K., Leendertz, F., Ehlers, B. & other authors (2014). Field immobilization for treatment of an unknown illness in a wild chimpanzee (Pan troglodytes schweinfurthii) at Gombe National Park, Tanzania: findings, challenges, and lessons learned. Primates 55, 89–99
    • (2014) Primates , vol.55 , pp. 89-99
    • Lonsdorf, E.1    Travis, D.2    Ssuna, R.3    Lantz, E.4    Wilson, M.5    Gamble, K.6    Terio, K.7    Leendertz, F.8    Ehlers, B.9
  • 19
    • 41649116518 scopus 로고    scopus 로고
    • Evidence of frequent recombination among human adenoviruses
    • Lukashev, A. N., Ivanova, O. E., Eremeeva, T. P. & Iggo, R. D. (2008). Evidence of frequent recombination among human adenoviruses. J Gen Virol 89, 380–388
    • (2008) J Gen Virol , vol.89 , pp. 380-388
    • Lukashev, A.N.1    Ivanova, O.E.2    Eremeeva, T.P.3    Iggo, R.D.4
  • 22
    • 27544500054 scopus 로고    scopus 로고
    • Serological detection of adenoviruses in non-human primates maintained in a colony in Kenya
    • Mwenda, J. M., Nyachieo, A., Langat, D. K. & Steele, D. A. (2005). Serological detection of adenoviruses in non-human primates maintained in a colony in Kenya. East Afr Med J 82, 371–375
    • (2005) East Afr Med J , vol.82 , pp. 371-375
    • Mwenda, J.M.1    Nyachieo, A.2    Langat, D.K.3    Steele, D.A.4
  • 25
    • 69249213616 scopus 로고    scopus 로고
    • Computational analysis of human adenovirus type 22 provides evidence for recombination among species D human adenoviruses in the penton base gene
    • Robinson, C. M., Rajaiya, J., Walsh, M. P., Seto, D., Dyer, D. W., Jones, M. S. & Chodosh, J. (2009). Computational analysis of human adenovirus type 22 provides evidence for recombination among species D human adenoviruses in the penton base gene. J Virol 83, 8980–8985
    • (2009) J Virol , vol.83 , pp. 8980-8985
    • Robinson, C.M.1    Rajaiya, J.2    Walsh, M.P.3    Seto, D.4    Dyer, D.W.5    Jones, M.S.6    Chodosh, J.7
  • 28
    • 70049118306 scopus 로고    scopus 로고
    • Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates
    • other authors
    • Roy, S., Vandenberghe, L. H., Kryazhimskiy, S., Grant, R., Calcedo, R., Yuan, X., Keough, M., Sandhu, A., Wang, Q. & other authors (2009). Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates. PLoS Pathog 5, e1000503
    • (2009) Plos Pathog , vol.5
    • Roy, S.1    Vandenberghe, L.H.2    Kryazhimskiy, S.3    Grant, R.4    Calcedo, R.5    Yuan, X.6    Keough, M.7    Sandhu, A.8    Wang, Q.9
  • 29
    • 0036499213 scopus 로고    scopus 로고
    • Large epidemic of respiratory illness due to adenovirus types 7 and 3 in healthy young adults
    • Ryan, M. A., Gray, G. C., Smith, B., McKeehan, J. A., Hawksworth, A. W. & Malasig, M. D. (2002). Large epidemic of respiratory illness due to adenovirus types 7 and 3 in healthy young adults. Clin Infect Dis 34, 577–582
    • (2002) Clin Infect Dis , vol.34 , pp. 577-582
    • Ryan, M.A.1    Gray, G.C.2    Smith, B.3    McKeehan, J.A.4    Hawksworth, A.W.5    Malasig, M.D.6
  • 30
    • 0035211450 scopus 로고    scopus 로고
    • Epidemic of adenovirus-induced respiratory illness among US military recruits: Epidemiologic and immunologic risk factors in healthy, young adults
    • other authors
    • Sanchez, J. L., Binn, L. N., Innis, B. L., Reynolds, R. D., Lee, T., Mitchell-Raymundo, F., Craig, S. C., Marquez, J. P., Shepherd, G. A. & other authors (2001). Epidemic of adenovirus-induced respiratory illness among US military recruits: epidemiologic and immunologic risk factors in healthy, young adults. J Med Virol 65, 710–718
    • (2001) J Med Virol , vol.65 , pp. 710-718
    • Sanchez, J.L.1    Binn, L.N.2    Innis, B.L.3    Reynolds, R.D.4    Lee, T.5    Mitchell-Raymundo, F.6    Craig, S.C.7    Marquez, J.P.8    Shepherd, G.A.9
  • 31
    • 84925014506 scopus 로고    scopus 로고
    • Adenovirus and herpesvirus diversity in free-ranging great apes in the Sangha region of the Republic of Congo
    • other authors
    • Seimon, T. A., Olson, S. H., Lee, K. J., Rosen, G., Ondzie, A., Cameron, K., Reed, P., Anthony, S. J., Joly, D. O. & other authors (2015). Adenovirus and herpesvirus diversity in free-ranging great apes in the Sangha region of the Republic of Congo. PLoS One 10, e0118543
    • (2015) Plos One , vol.10
    • Seimon, T.A.1    Olson, S.H.2    Lee, K.J.3    Rosen, G.4    Ondzie, A.5    Cameron, K.6    Reed, P.7    Anthony, S.J.8    Joly, D.O.9
  • 32
    • 78651460003 scopus 로고    scopus 로고
    • Adenovirus serotype 7 associated with a severe lower respiratory tract disease outbreak in infants in Shaanxi Province, China
    • Tang, L., Wang, L., Tan, X. & Xu, W. (2011). Adenovirus serotype 7 associated with a severe lower respiratory tract disease outbreak in infants in Shaanxi Province, China. Virol J 8, 23
    • (2011) Virol J , vol.8
    • Tang, L.1    Wang, L.2    Tan, X.3    Xu, W.4
  • 33
    • 65549122251 scopus 로고    scopus 로고
    • Outbreak of severe respiratory disease associated with emergent human adenovirus serotype 14 at a US air force training facility in 2007
    • other authors
    • Tate, J. E., Bunning, M. L., Lott, L., Lu, X., Su, J., Metzgar, D., Brosch, L., Panozzo, C. A., Marconi, V. C. & other authors (2009). Outbreak of severe respiratory disease associated with emergent human adenovirus serotype 14 at a US air force training facility in 2007. J Infect Dis 199, 1419–1426
    • (2009) J Infect Dis , vol.199 , pp. 1419-1426
    • Tate, J.E.1    Bunning, M.L.2    Lott, L.3    Lu, X.4    Su, J.5    Metzgar, D.6    Brosch, L.7    Panozzo, C.A.8    Marconi, V.C.9
  • 34
    • 0021118250 scopus 로고
    • Molecular epidemiology of human adenoviruses
    • Wadell, G. (1984). Molecular epidemiology of human adenoviruses. Curr Top Microbiol Immunol 110, 191–220
    • (1984) Curr Top Microbiol Immunol , vol.110 , pp. 191-220
    • Wadell, G.1
  • 35
    • 66749181110 scopus 로고    scopus 로고
    • Evidence of molecular evolution driven by recombination events influencing tropism in a novel human adenovirus that causes epidemic keratoconjunctivitis
    • other authors
    • Walsh, M. P., Chintakuntlawar, A., Robinson, C. M., Madisch, I., Harrach, B., Hudson, N. R., Schnurr, D., Heim, A., Chodosh, J. & other authors (2009). Evidence of molecular evolution driven by recombination events influencing tropism in a novel human adenovirus that causes epidemic keratoconjunctivitis. PLoS One 4, e5635
    • (2009) Plos One , vol.4
    • Walsh, M.P.1    Chintakuntlawar, A.2    Robinson, C.M.3    Madisch, I.4    Harrach, B.5    Hudson, N.R.6    Schnurr, D.7    Heim, A.8    Chodosh, J.9
  • 37
    • 80054992504 scopus 로고    scopus 로고
    • Novel adenoviruses in wild primates: A high level of genetic diversity and evidence of zoonotic transmissions
    • other authors
    • Wevers, D., Metzger, S., Babweteera, F., Bieberbach, M., Boesch, C., Cameron, K., Couacy-Hymann, E., Cranfield, M., Gray, M. & other authors (2011). Novel adenoviruses in wild primates: a high level of genetic diversity and evidence of zoonotic transmissions. J Virol 85, 10774–10784
    • (2011) J Virol , vol.85 , pp. 10774-10784
    • Wevers, D.1    Metzger, S.2    Babweteera, F.3    Bieberbach, M.4    Boesch, C.5    Cameron, K.6    Couacy-Hymann, E.7    Cranfield, M.8    Gray, M.9
  • 38
    • 36348964753 scopus 로고    scopus 로고
    • Ecological origins of novel human pathogens
    • Woolhouse, M. & Gaunt, E. (2007). Ecological origins of novel human pathogens. Crit Rev Microbiol 33, 231–242
    • (2007) Crit Rev Microbiol , vol.33 , pp. 231-242
    • Woolhouse, M.1    Gaunt, E.2


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