Genetic data and de novo mutation rates in father-son pairs of 23 Y-STR loci in Southern Brazil population

International Journal of Legal Medicine

Volumn 129, Issue 6, 2015, Pages 1221-1223

  Da Fré, Nicole Nascimento ^a,b   Rodenbusch, Rodrigo ^a,b   Gastaldo, André Zoratto ^a,b   Hanson, Erin ^c,d   Ballantyne, Jack ^c,d   Alho, Clarice Sampaio ^a  

^a PONTIFICAL CATHOLIC UNIVERSITY OF RIO GRANDE DO SUL   (Brazil)

^b Fundacao Estadual de Producao e Pesquisa em Saude   (Brazil)

^c UNIVERSITY OF CENTRAL FLORIDA   (United States)

^d National Center for Forensic Science   (United States)

Author keywords

DNA; Genetic marker; Mutation rate; Paternity; Y STR

Indexed keywords

MICROSATELLITE DNA;

BRAZIL; DNA FINGERPRINTING; GENE FREQUENCY; HAPLOTYPE; HUMAN; MALE; MUTATION; NUCLEAR FAMILY; POLYMERASE CHAIN REACTION; POPULATION GENETICS; Y CHROMOSOME;

BRAZIL; CHROMOSOMES, HUMAN, Y; DNA FINGERPRINTING; GENE FREQUENCY; GENETICS, POPULATION; HAPLOTYPES; HUMANS; MALE; MICROSATELLITE REPEATS; MUTATION; NUCLEAR FAMILY; POLYMERASE CHAIN REACTION;

EID: 84943820285     PISSN: 09379827     EISSN: 14371596     Source Type: Journal    
DOI: 10.1007/s00414-014-1101-2     Document Type: Review

References (13)

1. Instituto Brasileiro de Geografia e Estatística–IBGE (2000) Brasil 500 anos de povoamento. IBGE, Rio de Janeiro
2. Gusmão L, Butler JM, Carracedo A, Gill P, Kayser M, Mayr WR, Morling N, Prinz M, Roewer L, Tyler-Smith C, Schneider PM, International Society of Forensic Genetics (2006) DNA Commission of the International Society of Forensic Genetics (ISFG): an update of the recommendations on the use of Y-STRs in forensic analysis. Int J Legal Med 120(4):191–200
3. Carracedo A, Butler JM, Gusmão L, Parson W, Roewer L, Schneider PM (2010) Publication of population data for forensic purposes. Forensic Sci Int Genet 4(3):145–147
4. Davis C, Ge J, Sprecher C, Chidambaram A, Thompson J, Ewing M, Fulmer P, Rabbach D, Storts D, Budowle B (2013) Prototype PowerPlex® Y23 system: a concordance study. Forensic Sci Int Genet 7(1):204–208
5. Thompson JM, Ewing MM, Frank WE, Pogemiller JJ, Nolde CA, Koehler DJ, Shaffer AM, Rabbach DR, Fulmer PM, Sprecher CJ, Storts DR (2013) Developmental validation of the PowerPlex® Y23 system: a single multiplex Y-STR analysis system for casework and database samples. Forensic Sci Int Genet 7:240–250
6. Excoffier L, Lischer HE (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10(3):564–567
7. Willuweit S, Roewer L (2007) International forensic Y chromosome user group, Y chromosome haplotype reference database (YHRD): update. Forensic Sci Int Genet 1(2):83–87
8. Leite FP, Callegari-Jacques SM, Carvalho BA, Kommers T, Matte CH, Raimann PE, Schwengber SP, Sortica VA, Tsuneto LT, Petzl-Erler ML, Salzano FM, Hutz MH (2008) Y-STR analysis in Brazilian and South Amerindian populations. Am J Hum Biol 20:359–363
9. Schwengber SP, Kommers T, Matte CH, Raimann PE, Carvalho BA, Leite FP, Medeiros MA, Souza LF, Castro CS, Chassot FG, Bonatto SL (2009) Population data of 17 Y-STR loci from Rio Grande do Sul state (South Brazil). Forensic Sci Int Genet 4:e31–e33
10. Ge J, Budowle B, Aranda XG, Planz JV, Eisenberg AJ, Chakraborty R (2009) Mutation rates at Y chromosome short tandem repeats in Texas populations. Forensic Sci Int Genet 3(3):179–184
11. Dupuy BM, Stenersen M, Egeland T, Olaisen B (2004) Y-chromosomal microsatellite mutation rates: differences in mutation rate between and within loci. Hum Mutat 23(2):117–124
12. Gusmão L, Sánchez-Diz P, Calafell F, Martín P, Alonso CA, Alvarez-Fernández F, Alves C, Borjas-Fajardo L, Bozzo WR, Bravo ML, Builes JJ, Capilla J, Carvalho M, Castillo C, Catanesi CI, Corach D, Di Lonardo AM, Espinheira R, Fagundes de Carvalho E, Farfán MJ, Figueiredo HP, Gomes I, Lojo MM, Marino M, Pinheiro MF, Pontes ML, Prieto V, Ramos-Luis E, Riancho JA, Souza Góes AC, Santapa OA, Sumita DR, Vallejo G, Vidal Rioja L, Vide MC, Vieira da Silva CI, Whittle MR, Zabala W, Zarrabeitia MT, Alonso A, Carracedo A, Amorim A (2005) Mutation rates at Y chromosome specific microsatellites. Hum Mutat 26(6):520–528
13. Goedbloed M, Vermeulen M, Fang RN, Lembring M, Wollstein A, Ballantyne K, Lao O, Brauer S, Krüger C, Roewer L, Lessig R, Ploski R, Dobosz T, Henke L, Henke J, Furtado MR, Kayser M (2009) Comprehensive mutation analysis of 17 Y-chromosomal short tandem repeat polymorphisms included in the AmpFℓSTR Yfiler PCR amplification kit. Int J Legal Med 123(6):471–482