SCOPUS 정보 검색 플랫폼

Volumn 31, Issue 15, 2015, Pages 2589-2590

EdgeRun: An R package for sensitive, functionally relevant differential expression discovery using an unconditional exact test

(4) Dimont, Emmanuel a Shi, Jiantao a Kirchner, Rory a Hide, Winston a,b,c

a HARVARD SCHOOL OF PUBLIC HEALTH (United States)

b HARVARD STEM CELL INSTITUTE (United States)

c UNIVERSITY OF SHEFFIELD (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

RNA;

BIOLOGY; GENE EXPRESSION PROFILING; GENETIC DATABASE; GENETICS; HIGH THROUGHPUT SEQUENCING; HUMAN; MALE; PROCEDURES; PROSTATE TUMOR; SEQUENCE ANALYSIS; SOFTWARE;

COMPUTATIONAL BIOLOGY; DATABASES, GENETIC; GENE EXPRESSION PROFILING; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; MALE; PROSTATIC NEOPLASMS; RNA, NEOPLASM; SEQUENCE ANALYSIS, RNA; SOFTWARE;

EID: 84943644188 PISSN: 13674803 EISSN: 14602059 Source Type: Journal
DOI: 10.1093/bioinformatics/btv209 Document Type: Article

Times cited : (43)

References (10)

1
- 51149208557
- A new test for 2x2 tables
- Barnard, G. A. (1945) A new test for 2x2 tables. Nature, 156, 177.
- (1945) Nature , vol.156 , pp. 177
- Barnard, G.A.¹

2
- 0003493777
- Oliver and Boyd, Edinburgh
- Fisher, R. A. (1925) Statistical Methods for Research Workers. Oliver and Boyd, Edinburgh.
- (1925) Statistical Methods for Research Workers
- Fisher, R.A.¹

3
- 79959916374
- Unamplified cap analysis of gene expression on a single-molecule sequencer
- Kanamori-Katayama, M. et al. (2011) Unamplified cap analysis of gene expression on a single-molecule sequencer. Genome Res., 21, 1150-1159.
- (2011) Genome Res. , vol.21 , pp. 1150-1159
- Kanamori-Katayama, M.¹

4
- 58149490714
- Determination of tag density required for digital transcriptome analysis: Application to an androgen-sensitive prostate cancer model
- Li, H. et al. (2008) Determination of tag density required for digital transcriptome analysis: application to an androgen-sensitive prostate cancer model. PNAS, 105, 20179-20184.
- (2008) PNAS , vol.105 , pp. 20179-20184
- Li, H.¹

5
- 84924629414
- Moderated estimation of fold change and dispersion for RNA-Seq data with DESeq2
- Love, M. I. et al. (2014) Moderated estimation of fold change and dispersion for RNA-Seq data with DESeq2. Genome Biology, 15, 550
- (2014) Genome Biology , vol.15 , pp. 550
- Love, M.I.¹

6
- 46249106990
- Mapping and quantifying mammalian transcrip-tomes by RNA-Seq
- Mortazavi, A. et al. (2008) Mapping and quantifying mammalian transcrip-tomes by RNA-Seq. Nat. Methods, 5, 621-628.
- (2008) Nat. Methods , vol.5 , pp. 621-628
- Mortazavi, A.¹

7
- 84875196536
- COXPRESSdb: A database of comparative gene coexpression networks of eleven species of mammals
- Obayashi, T. et al. (2013) COXPRESSdb: a database of comparative gene coexpression networks of eleven species of mammals. Nucleic Acids Res., 41, D1014-D1020.
- (2013) Nucleic Acids Res. , vol.41 , pp. D1014-D1020
- Obayashi, T.¹

8
- 67651205715
- Identifying relationships among genomic disease regions: Predicting genes at pathogenic SNP associations and rare deletions
- Raychaudhuri, S. et al. (2009) Identifying relationships among genomic disease regions: predicting genes at pathogenic SNP associations and rare deletions. PLoS Genet., 5, e1000534.
- (2009) PLoS Genet. , vol.5 , pp. e1000534
- Raychaudhuri, S.¹

9
- 75249087100
- EdgeR: A bioconductor package for differential expression analysis of digital gene expression data
- Robinson, M. D. et al. (2010) edgeR: a bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics, 26, 139-140.
- (2010) Bioinformatics , vol.26 , pp. 139-140
- Robinson, M.D.¹

10
- 84907021033
- CompcodeR-an R package for benchmarking differential expression methods for RNA-Seq data
- Soneson, C. (2014) compcodeR-an R package for benchmarking differential expression methods for RNA-Seq data. Bioinformatics, 30, 2517-2518.
- (2014) Bioinformatics , vol.30 , pp. 2517-2518
- Soneson, C.¹

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.