-
1
-
-
84867310470
-
The revised classification of eukaryotes
-
Adl SM, Simpson AG, Lane CE, Luke J, Bass D, Bowser SS, BrownM, Burki F, Dunthorn M, Hampl V, et al. 2012. The revised classification of eukaryotes. J Eukaryot Microbiol. 59(5):429-514.
-
(2012)
J Eukaryot Microbiol.
, vol.59
, Issue.5
, pp. 429-514
-
-
Adl, S.M.1
Simpson, A.G.2
Lane, C.E.3
Luke, J.4
Bass, D.5
Bowser, S.S.6
BrownM Burki, F.7
Dunthorn, M.8
Hampl, V.9
-
2
-
-
0026822377
-
Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: An example from the compositae
-
Baldwin BG. 1992. Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the compositae. Mol Phylogenet Evol. 1(1):3-16.
-
(1992)
Mol Phylogenet Evol.
, vol.1
, Issue.1
, pp. 3-16
-
-
Baldwin, B.G.1
-
3
-
-
77649108109
-
Validation of the ITS2 region as a novel DNA barcode for identifying medicinal plant species
-
Chen S, Yao H, Han J, Liu C, Song J, Shi L, Zhu Y, Ma X, Gao T, Pang X, et al. 2010. Validation of the ITS2 region as a novel DNA barcode for identifying medicinal plant species. PLoS One 5(1):e8613.
-
(2010)
PLoS One
, vol.5
, Issue.1
, pp. e8613
-
-
Chen, S.1
Yao, H.2
Han, J.3
Liu, C.4
Song, J.5
Shi, L.6
Zhu, Y.7
Ma, X.8
Gao, T.9
Pang, X.10
-
4
-
-
0037677692
-
ITS2 is a double-edged tool for eukaryote evolutionary comparisons
-
Coleman AW. 2003. ITS2 is a double-edged tool for eukaryote evolutionary comparisons. Trends Genet. 19(7):370-375.
-
(2003)
Trends Genet.
, vol.19
, Issue.7
, pp. 370-375
-
-
Coleman, A.W.1
-
5
-
-
57649155508
-
Is there a molecular key to the level of biological species in eukaryotes? A DNA guide
-
Coleman AW. 2009. Is there a molecular key to the level of biological species in eukaryotes? A DNA guide. Mol Phylogenet Evol. 50(1):197-203.
-
(2009)
Mol Phylogenet Evol.
, vol.50
, Issue.1
, pp. 197-203
-
-
Coleman, A.W.1
-
6
-
-
84856562355
-
The ncbi taxonomy database
-
Database issue
-
Federhen, S. 2012. The NCBI Taxonomy database. Nucleic Acids Res. 40(Database issue):D136-D143.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. D136-D143
-
-
Federhen, S.1
-
7
-
-
84924247676
-
Evaluating multiplexed next-generation sequencing as a method in palynology for mixed pollen samples
-
Keller A, Danner N, Grimmer G, AnkenbrandM, von der OheK, von der Ohe W, Rost S, Heartel S, Steffan-Dewenter I. 2015. Evaluating multiplexed next-generation sequencing as a method in palynology for mixed pollen samples. Plant Biol. 17(2):558-566.
-
(2015)
Plant Biol.
, vol.17
, Issue.2
, pp. 558-566
-
-
Keller, A.1
Danner, N.2
Grimmer, G.3
Von Der A.OheK.4
Von Der Ohe, W.5
Rost, S.6
Heartel, S.7
Steffan-Dewenter, I.8
-
8
-
-
76749097624
-
Including RNA secondary structures improves accuracy and robustness in reconstruction of phylogenetic trees
-
Keller A, Feorster F, Meuller T, Dandekar T, Schultz J, Wolf M. 2010. Including RNA secondary structures improves accuracy and robustness in reconstruction of phylogenetic trees. Biol Direct. 5(1):4.
-
(2010)
Biol Direct.
, vol.5
, Issue.1
, pp. 4
-
-
Keller, A.1
Feorster, F.2
Meuller, T.3
Dandekar, T.4
Schultz, J.5
Wolf, M.6
-
9
-
-
58049115079
-
5.8s-28s rRNA interaction and HMM-based ITS2 annotation
-
Keller A, Schleicher T, Schultz J, Meuller T, Dandekar T, Wolf M. 2009. 5.8s-28s rRNA interaction and HMM-based ITS2 annotation. Gene 430(12):50-57.
-
(2009)
Gene
, vol.430
, Issue.12
, pp. 50-57
-
-
Keller, A.1
Schleicher, T.2
Schultz, J.3
Meuller, T.4
Dandekar, T.5
Wolf, M.6
-
10
-
-
75549088448
-
The ITS2 Database III: Sequences and structures for phylogeny
-
Database issue
-
Koetschan C, Feorster F, Keller A, Schleicher T, Ruderisch B, Schwarz R, Meuller T, Wolf M, Schultz J. 2010. The ITS2 Database III: sequences and structures for phylogeny. Nucleic Acids Res. 38(Database issue):D275-D279.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. D275-D279
-
-
Koetschan, C.1
Feorster, F.2
Keller, A.3
Schleicher, T.4
Ruderisch, B.5
Schwarz, R.6
Meuller, T.7
Wolf, M.8
Schultz, J.9
-
11
-
-
84859841345
-
ITS2 Database IV interactive taxon sampling for internal transcribed spacer 2 based phylogenies
-
Koetschan C, Hackl T, Meuller T, Wolf M, Feorster F, Schultz J. 2012. ITS2 Database IV: interactive taxon sampling for internal transcribed spacer 2 based phylogenies. Mol Phylogenet Evol. 63(3):585-588.
-
(2012)
Mol Phylogenet Evol.
, vol.63
, Issue.3
, pp. 585-588
-
-
Koetschan, C.1
Hackl, T.2
Meuller, T.3
Wolf, M.4
Feorster, F.5
Schultz, J.6
-
12
-
-
84934438960
-
UNAFold: Software for nucleic acid folding and hybridization
-
MarkhamNR, ZukerM. 2008. UNAFold: software for nucleic acid folding and hybridization. Methods Mol Biol. 453:3-31.
-
(2008)
Methods Mol Biol.
, vol.453
, pp. 3-31
-
-
Markham, N.R.1
Zuker, M.2
-
13
-
-
84863746871
-
The ITS2 database
-
Merget B, Koetschan C, Hackl T, Feorster F, Dandekar T, Me uller T, Schultz J, Wolf M. 2012. The ITS2 database. J Vis Exp. (61):3806.
-
(2012)
J Vis Exp.
, vol.61
, pp. 3806
-
-
Merget, B.1
Koetschan, C.2
Hackl, T.3
Feorster, F.4
Dandekar, T.5
Meuller, T.6
Schultz, J.7
Wolf, M.8
-
14
-
-
34548352883
-
Distinguishing species
-
Meuller T, Philippi N, Dandekar T, Schultz J, Wolf M. 2007. Distinguishing species. RNA 13(9):1469-1472.
-
(2007)
RNA
, vol.13
, Issue.9
, pp. 1469-1472
-
-
Meuller, T.1
Philippi, N.2
Dandekar, T.3
Schultz, J.4
Wolf, M.5
-
15
-
-
84946027595
-
Database resources of the National Center for Biotechnology Information
-
NCBI Resource Coordinators. Database issue
-
NCBI Resource Coordinators. 2015. Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 43(Database issue):D6-D17.
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D6-D17
-
-
-
16
-
-
84879213068
-
Use of the potential DNA barcode ITS2 to identify herbal materials
-
Pang X, Shi L, Song J, Chen X, Chen S. 2012. Use of the potential DNA barcode ITS2 to identify herbal materials. J NatMed. 67(3):571-575.
-
(2012)
J NatMed.
, vol.67
, Issue.3
, pp. 571-575
-
-
Pang, X.1
Shi, L.2
Song, J.3
Chen, X.4
Chen, S.5
-
17
-
-
34248149943
-
Bold: The barcode of life data system
-
Ratnasingham S, Hebert PDN. 2007. bold: the Barcode of Life Data System (http://www.barcodinglife.org). Mol Ecol Notes. 7(3):355-364.
-
(2007)
Mol Ecol Notes.
, vol.7
, Issue.3
, pp. 355-364
-
-
Ratnasingham, S.1
Hebert, P.D.N.2
-
18
-
-
73149085504
-
Compensatory base changes illuminate morphologically difficult taxonomy
-
Ruhl MW, Wolf M, Jenkins TM. 2010. Compensatory base changes illuminate morphologically difficult taxonomy. Mol Phylogenet Evol. 54(2):664-669.
-
(2010)
Mol Phylogenet Evol.
, vol.54
, Issue.2
, pp. 664-669
-
-
Ruhl, M.W.1
Wolf, M.2
Jenkins, T.M.3
-
19
-
-
84859972408
-
Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi
-
Fungal Barcoding Consortium.
-
Schoch CL, Seifert KA, Huhndorf S, Robert V, Spouge JL, Levesque CA, Chen W, Fungal Barcoding Consortium. 2012. Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi. Proc Natl Acad Sci U S A. 109(16):6241-6246.
-
(2012)
Proc Natl Acad Sci U S A.
, vol.109
, Issue.16
, pp. 6241-6246
-
-
Schoch, C.L.1
Seifert, K.A.2
Huhndorf, S.3
Robert, V.4
Spouge, J.L.5
Levesque, C.A.6
Chen, W.7
-
20
-
-
15444361843
-
A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota
-
Schultz J, Maisel S, Gerlach D, Meuller T, Wolf M. 2005. A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota. RNA 11(4):361-364.
-
(2005)
RNA
, vol.11
, Issue.4
, pp. 361-364
-
-
Schultz, J.1
Maisel, S.2
Gerlach, D.3
Meuller, T.4
Wolf, M.5
-
21
-
-
33747844305
-
The internal transcribed spacer 2 databasea web server for (not only) low level phylogenetic analyses
-
Schultz J, Meuller T, Achtziger M, Seibel PN, Dandekar T, Wolf M. 2006. The internal transcribed spacer 2 databasea web server for (not only) low level phylogenetic analyses. Nucleic Acids Res. 34(Suppl 2):W704-W707.
-
(2006)
Nucleic Acids Res.
, vol.34
, Issue.SUPPL2
, pp. W704-W707
-
-
Schultz, J.1
Meuller, T.2
Achtziger, M.3
Seibel, P.N.4
Dandekar, T.5
Wolf, M.6
-
22
-
-
67349271005
-
ITS2 sequencestructure analysis in phylogenetics: A how-Do manual for molecular systematics
-
Schultz J, Wolf M. 2009. ITS2 sequencestructure analysis in phylogenetics: a how-Do manual for molecular systematics. Mol Phylogenet Evol. 52(2):520-523.
-
(2009)
Mol Phylogenet Evol.
, vol.52
, Issue.2
, pp. 520-523
-
-
Schultz, J.1
Wolf, M.2
-
23
-
-
38549087890
-
The its2 database II homology modelling RNA structure for molecular systematics
-
Database issue
-
Selig C, Wolf M, Meuller T, Dandekar T, Schultz J. 2008. The ITS2 Database II: homology modelling RNA structure for molecular systematics. Nucleic Acids Res. 36(Database issue):D377-D380.
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. D377-D380
-
-
Selig, C.1
Wolf, M.2
Meuller, T.3
Dandekar, T.4
Schultz, J.5
-
24
-
-
84937239051
-
Increased efficiency in identifying mixed pollen samples by meta-barcoding with a dual-indexing approach
-
Sickel W, Ankenbrand MJ, Grimmer G, Holzschuh A, Heartel S, Lanzen J, Steffan-Dewenter I, Keller A. 2015. Increased efficiency in identifying mixed pollen samples by meta-barcoding with a dual-indexing approach. BMC Ecol. 15(1):20.
-
(2015)
BMC Ecol.
, vol.15
, Issue.1
, pp. 20
-
-
Sickel, W.1
Ankenbrand, M.J.2
Grimmer, G.3
Holzschuh, A.4
Heartel, S.5
Lanzen, J.6
Steffan-Dewenter, I.7
Keller, A.8
-
25
-
-
27144461969
-
Homology modeling revealed more than 20, 000 rRNA internal transcribed spacer 2 (ITS2) secondary structures
-
Wolf M, Achtziger M, Schultz J, Dandekar T, Meuller T. 2005. Homology modeling revealed more than 20, 000 rRNA internal transcribed spacer 2 (ITS2) secondary structures. RNA 11(11):1616-1623.
-
(2005)
RNA
, vol.11
, Issue.11
, pp. 1616-1623
-
-
Wolf, M.1
Achtziger, M.2
Schultz, J.3
Dandekar, T.4
Meuller, T.5
-
26
-
-
84903550772
-
ITS2, 18s, 16s or any other RNA simply aligning sequences and their individual secondary structures simultaneously by an automatic approach
-
Wolf M, Koetschan C, Meuller T. 2014. ITS2, 18s, 16s or any other RNA simply aligning sequences and their individual secondary structures simultaneously by an automatic approach. Gene 546(2):145-149.
-
(2014)
Gene
, vol.546
, Issue.2
, pp. 145-149
-
-
Wolf, M.1
Koetschan, C.2
Meuller, T.3
-
27
-
-
78049313200
-
Use of ITS2 region as the universal DNA barcode for plants and animals
-
YaoH, Song J, Liu C, Luo K, Han J, Li Y, Pang X, XuH, Zhu Y, Xiao P, et al. 2010. Use of ITS2 region as the universal DNA barcode for plants and animals. PLoS One 5(10):e13102.
-
(2010)
PLoS One
, vol.5
, Issue.10
, pp. e13102
-
-
YaoH Song, J.1
Liu, C.2
Luo, K.3
Han, J.4
Li, Y.5
Pang, X.6
Xu, H.7
Zhu, Y.8
Xiao, P.9
|