The potential of grid, virtual laboratories and virtual organizations for bio-sciences

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 2234, Issue , 2001, Pages 1-9

  Afsarmanesh, Hamideh ^a   Kaletas, Ersin ^a   Hertzberger, Louis O ^a  

^a UNIVERSITY OF AMSTERDAM   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTER SCIENCE; COMPUTERS;

BIO-SCIENCE; DISTRIBUTED ANALYSIS; GENERAL DESIGNS; GEOGRAPHICALLY DISTRIBUTED RESOURCES; GRID-BASED; SCIENTIFIC RESEARCHES; VIRTUAL LABORATORIES; VIRTUAL ORGANIZATION;

ARTIFICIAL INTELLIGENCE;

EID: 84943263188     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/3-540-45627-9_1     Document Type: Conference Paper

References (21)

1. I. Foster, C. Kesselman, and S. Tuecke, “The Anatomy of the Grid (to appear)”, International Journal of Supercomputer Applications (2001).
2. I. Foster and C. Kesselman, “A toolkit-based grid architecture”, in The Grid: Blueprints for a Future Computing Infrastructure: Morgan-Kauffman (1998).
3. DOE, "DOE2000 Collaboratories", http://www-unix.mcs.anl.gov/DOE2000/collabs.html, (2000).
4. H. Afsarmanesh, E. Kaletas, A. Benabdelkader, C. Garita, and L. O. Hertzberger, “A Reference Architecture for Scientific Virtual Laboratories”, Future Generation Computer Systems, vol. 17, (2001) 999-1008.
5. G. B. Eijkel, H. Afsarmanesh, D. Groep, A. Frenkel, and R. M. A. Heeren, “Mass spectrometry in the Amsterdam Virtual Laboratory: Development of a high-performance platform for meta-data analysis”, presented at 13th Sanibel Conference on Mass Spectometry: Informatics and Mass Spectometry, Florida, USA (2001).
6. P. Sterk, “Accessibility of micro-array data through the Virtual Laboratory at the University of Amsterdam”, presented at 3rd International Meeting on Microarray Data Standards, Annotations, Ontologies and Databases, Stanford CA, USA (2001).
7. Z. Zhao, R. G. Belleman, G. D. v. Albada, and P. M. A. Sloot, “System Integration for Interactive Simulation Systems using Intelligent Agents”, presented at ASCI Conference, Heijen, The Netherlands (2001).
8. G. Williams, “Nucleic acid and protein sequence databases”, in Genetics Databases, M. J. Bishop, Ed. Hinxton, Cambridge: Academic Press (1999) 11-37.
9. CELERA, "Celera Genomics", http://www.celera.com/,(2001).
10. A. D. Baxevanis, “The Molecular Biology Database Collection: an updated compilation of biological database resources”, Nucleic Acids Research, vol. 29, (2001).
11. "MIAME - Minimum Information about a Microarray Experiment", http://www.ebi.ac.uk/microarray/MGED/Annotations-wg/index.html, (2001).
12. M. J. Bishop, “Genetics Databases”. Hinxton, Cambridge: Academic Press (1999).
13. E. Pennisi, “Keeping genome databases clean and up to date”, Science, vol. 286, (1999) 447-449.
14. E. Pennisi, “Seeking common language in a tower of Babel”, Science, vol. 286, (1999) 449-450.
15. A. Siepel, A. Farmer, A. Tolopko, M. Zhuang, P. Mendes, W. Beavis, and B. Sobral, “ISYS:A decentralized, component-based approach to the integration of heterogeneous bioinformatics resources”, Bioinformatics, (2000).
16. L. M. Haas, P. M. Schwarz, P. Kodali, E. Kotlar, J. E. Rice, and W. C. Swope, “Discovery Link: A system for integrated access to life sciences data sources”, IBM Systems Journal, vol. 40, (2001) 489-511.
17. C. Garita, H. Afsarmanesh, and L. O. Hertzberger, “A Survey of Distributed Information Management Approaches for Virtual Enterprise Infrastructures (to appear)”, in Managing Virtual Web Organizations in the 21st Century: Issues and Challenges, U. J. Franke, Ed.: Idea Group Publishing, (2001).
18. C. Garita, Y. Ugur, A. Frenkel, H. Afsarmanesh, and L. O. Hertzberger, “DIMS: Implementation of a Federated Information Management System for PRODNET II”, presented at 11th International Conference and Workshop on Database and Expert Systems Applications - DEXA '2000, London, England (2000).
19. E. Kaletas, C. Garita, H. Afsarmanesh, and L. O. Hertzberger, “Implementation of a Federated Information Management System to Support VEs in the Tourism Sector”, Faculty of Science - University of Amsterdam, Technical Report, CS-01-05 (2001).
20. L. M. Camarinha-Matos and H. Afsarmanesh, “The Virtual Enterprise Concept”, in Infrastructures for Virtual Enterprises - Networking Industrial Enterprises, L. M. Camarinha- Matos and H. Afsarmanesh, Eds.: Kluwer Academic, (1999) 3-14.
21. E. C. Kaletas, H. Afsarmanesh, T. M. Breit, and L. O. Hertzberger, “EXPRESSIVE - A database for micro-array gene expression studies”, University of Amsterdam, Informatics Institute, Amsterdam, Technical report, CS-2001-02 (2001).