Derivation of L-system models from measurements of biological branching structures using genetic algorithms

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 2358, Issue , 2002, Pages 514-524

  Runqiang, Bian ^a,b   Chen, Phoebe ^a,c   Burrage, Kevin ^a   Hanan, Jim ^a   Room, Peter ^a   Belward, John ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

^b TIANJIN UNIVERSITY OF TECHNOLOGY   (China)

^c QUEENSLAND UNIVERSITY OF TECHNOLOGY   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

ARTIFICIAL INTELLIGENCE; BIOINFORMATICS; COST FUNCTIONS; EXPERT SYSTEMS; FORESTRY; GENETIC ALGORITHMS; TREES (MATHEMATICS);

BIOLOGICAL OBJECTS; BRANCHING STRUCTURES; DATABASE CONFIGURATION; MEASUREMENTS OF; OBSERVATIONAL DATA; POSITIONAL INFORMATION; TARGET STRUCTURE; TREE ARCHITECTURES;

SEARCH ENGINES;

EID: 84943235258     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/3-540-48035-8_50     Document Type: Conference Paper

References (16)

1. Room, P., Hanan, J., Prusinkiewicz, P.: Virtual plants: new perspectives for ecologists, pathologists and agricultural scientists. Elsevier trends journals, 1 (1996) 33-38
2. Collado Vides, L., Gomez Alcaraz, G., Rivas Lechuga. G., Gomez Gutierrez, V.: Simulation of the clonal growth of Bostrychia radicans (Ceramiales- Rhodophyta) using Lindenmayer systems. BIOSYSTEMS, 1 (1997) 19-27
3. Gautier, H., Mech, R., Prusinkiewicz, P., Varlet-Grancher, C.: 3D architectural modeling of aerial photomorphoginisis in white clover (trifolium repens L.) using L-systems. Annals of Botany, 85 (2000) 359-370
4. Kaandorp, J. A.: Fractal modelling: growth and form in biology. Springer- Verlag, Berlin New York (1994)
5. De Boer, M. J. M.: Analysis and computer generation of division patterns in cell layers using developmental algorithms. PhD thesis, Uijks Universiteit Utrecht (1989)
6. Frijters, D.: An automata-theoretical model of the vegetative and flowering development of Hieracium Murorum. Biological Cybernetics, 24 (1976) 1-13
7. Renshaw, E.: Computer simulation of sitka spruce: spatial branching models for canopy growth and root structure. IMA Journal of Mathematics applied in Medicine &Biology, 2 (1985) 183-200
8. Hanan, J.: Virtual plants-integrating architectural and physiological models. Environmental Modelling & Software, 1 (1997) 35-42
9. Prusinkiewicz, P., Hanan, J., Mech, R.: (2000) An L-system-based plant modeling language. In: Nagl, M., Schurr, A., Munch, M. (eds.): Lecture Notes in Computer Science, Vol. 1779. Springer-Verlag, Berlin (2000) 395-410
10. Kaitaniemi, P., Hanan, J., Room, P.: Virtual sorghum: visualisation of partitioning and morphogenesis. Computers and Electronics in Agriculture, 3 (2000) 195-205
11. Danjon, F., Bert, D., Godin, C., Trichet, P.: Structural root architecture of 5- year-old Pinus pinaster measured by 3D digitising and analysed with AMAPmod. Plant and Soil, 217 (1999) 49-63
12. Curry, R.: On the evolution of parametric L-systems. Research Report of Department of Computer Science, University of Calgary, Alberta, Canada (1999)
13. Ochoa, G.: On genetic algorithms and Lindenmayer systems. In Problem Solving from Nature- PPSN V. Lecture Notes in Computer Science, Vol. 1498. Springer-Verlag, Berlin Heidelberg New York (1998) 335-344
14. Jacob, C.: Illustrating evolutionary computation with mathematica. Morgan Kaufmann (2001)
15. Chen, P., Colomb, B. M.: Database Technologies for L-system Simulations in Virtual Plant Applications on Bioinformatics. to appear in the Int. Journal of Knowledge and Information Systems. Springer-Verlag, Berlin (2002)
16. Prusinkiewicz, P., Lindenmayer, A.: The algorithmic beauty of plants. Springer- Verlag, New York (1990)