-
1
-
-
0037101619
-
Serial analysis of gene expression identifies metallothionein-II as major neuroprotective gene in mouse focal cerebral ischemia
-
Trendelenburg G, Prass K, Priller J, Kapinya K, Polley A, Muselmann C et al. Serial analysis of gene expression identifies metallothionein-II as major neuroprotective gene in mouse focal cerebral ischemia. J Neurosci 2002; 22: 5879-5888.
-
(2002)
J Neurosci
, vol.22
, pp. 5879-5888
-
-
Trendelenburg, G.1
Prass, K.2
Priller, J.3
Kapinya, K.4
Polley, A.5
Muselmann, C.6
-
3
-
-
84858020909
-
Unraveling the ischemic brain transcriptome in a permanent middle cerebral artery occlusion mouse model by DNA microarray analysis
-
Hori M, Nakamachi T, Rakwal R, Shibato J, Nakamura K, Wada Y et al. Unraveling the ischemic brain transcriptome in a permanent middle cerebral artery occlusion mouse model by DNA microarray analysis. Dis Model Mech 2012; 5: 270-283.
-
(2012)
Dis Model Mech
, Issue.5
, pp. 270-283
-
-
Hori, M.1
Nakamachi, T.2
Rakwal, R.3
Shibato, J.4
Nakamura, K.5
Wada, Y.6
-
4
-
-
0035807767
-
Effects of cerebral ischemia in mice lacking DNA methyltransferase 1 in post-mitotic neurons
-
Endres M, Fan G, Meisel A, Dirnagl U, Jaenisch R. Effects of cerebral ischemia in mice lacking DNA methyltransferase 1 in post-mitotic neurons. Neuroreport 2001; 12: 3763-3766.
-
(2001)
Neuroreport
, vol.12
, pp. 3763-3766
-
-
Endres, M.1
Fan, G.2
Meisel, A.3
Dirnagl, U.4
Jaenisch, R.5
-
5
-
-
41149124866
-
Inhibition of histone deacetylation protects wildtype but not gelsolin-deficient mice from ischemic brain injury
-
Yildirim F, Gertz K, Kronenberg G, Harms C, Fink KB, Meisel A et al. Inhibition of histone deacetylation protects wildtype but not gelsolin-deficient mice from ischemic brain injury. Exp Neurol 2008; 210: 531-542.
-
(2008)
Exp Neurol
, vol.210
, pp. 531-542
-
-
Yildirim, F.1
Gertz, K.2
Kronenberg, G.3
Harms, C.4
Fink, K.B.5
Meisel, A.6
-
7
-
-
68749117698
-
Targeting histone deacetylases as a multifaceted approach to treat the diverse outcomes of stroke
-
Langley B, Brochier C, Rivieccio MA. Targeting histone deacetylases as a multifaceted approach to treat the diverse outcomes of stroke. Stroke 2009; 40: 2899-2905.
-
(2009)
Stroke
, vol.40
, pp. 2899-2905
-
-
Langley, B.1
Brochier, C.2
Rivieccio, M.A.3
-
8
-
-
77958544846
-
Benefits of histone deacetylase inhibitors for acute brain injury: A systematic review of animal studies
-
Gibson CL, Murphy SP. Benefits of histone deacetylase inhibitors for acute brain injury: a systematic review of animal studies. J Neurochem 2010; 115: 806-813.
-
(2010)
J Neurochem
, Issue.115
, pp. 806-813
-
-
Gibson, C.L.1
Murphy, S.P.2
-
9
-
-
46249112085
-
Combinatorial patterns of histone acetylations and methylations in the human genome
-
Wang Z, Zang C, Rosenfeld JA, Schones DE, Barski A, Cuddapah S et al. Combinatorial patterns of histone acetylations and methylations in the human genome. Nat Genet 2008; 40: 897-903.
-
(2008)
Nat Genet
, vol.40
, pp. 897-903
-
-
Wang, Z.1
Zang, C.2
Rosenfeld, J.A.3
Schones, D.E.4
Barski, A.5
Cuddapah, S.6
-
10
-
-
0037099413
-
G9a histone methyltransferase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis
-
Tachibana M, Sugimoto K, Nozaki M, Ueda J, Ohta T, Ohki M et al. G9a histone methyltransferase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis. Genes Dev 2002; 16: 1779-1791.
-
(2002)
Genes Dev
, vol.16
, pp. 1779-1791
-
-
Tachibana, M.1
Sugimoto, K.2
Nozaki, M.3
Ueda, J.4
Ohta, T.5
Ohki, M.6
-
11
-
-
0035282573
-
Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins
-
Lachner M, O'Carroll D, Rea S, Mechtler K, Jenuwein T. Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins. Nature 2001; 410: 116-120.
-
(2001)
Nature
, vol.410
, pp. 116-120
-
-
Lachner, M.1
O'Carroll, D.2
Rea, S.3
Mechtler, K.4
Jenuwein, T.5
-
12
-
-
33751209468
-
Direct interaction between DNMT1 and G9a coordinates DNA and histone methylation during replication
-
Esteve PO, Chin HG, Smallwood A, Feehery GR, Gangisetty O, Karpf AR et al. Direct interaction between DNMT1 and G9a coordinates DNA and histone methylation during replication. Genes Dev 2006; 20: 3089-3103.
-
(2006)
Genes Dev
, vol.20
, pp. 3089-3103
-
-
Esteve, P.O.1
Chin, H.G.2
Smallwood, A.3
Feehery, G.R.4
Gangisetty, O.5
Karpf, A.R.6
-
13
-
-
0037079677
-
Functional and physical interaction between the histone methyl transferase Suv39H1 and histone deacetylases
-
Vaute O, Nicolas E, Vandel L, Trouche D. Functional and physical interaction between the histone methyl transferase Suv39H1 and histone deacetylases. Nucleic Acids Res 2002; 30: 475-481.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 475-481
-
-
Vaute, O.1
Nicolas, E.2
Vandel, L.3
Trouche, D.4
-
14
-
-
33746398550
-
Inhibition of histone deacetylation protects wild-Type but not gelsolin-deficient neurons from oxygen/glucose deprivation
-
Meisel A, Harms C, Yildirim F, Bosel J, Kronenberg G, Harms U et al. Inhibition of histone deacetylation protects wild-Type but not gelsolin-deficient neurons from oxygen/glucose deprivation. J Neurochem 2006; 98: 1019-1031.
-
(2006)
J Neurochem
, vol.98
, pp. 1019-1031
-
-
Meisel, A.1
Harms, C.2
Yildirim, F.3
Bosel, J.4
Kronenberg, G.5
Harms, U.6
-
15
-
-
19944429120
-
Lentivirus-based genetic manipulations of cortical neurons and their optical and electrophysiological monitoring in vivo
-
Dittgen T, Nimmerjahn A, Komai S, Licznerski P, Waters J, Margrie TW et al. Lentivirus-based genetic manipulations of cortical neurons and their optical and electrophysiological monitoring in vivo. Proc Natl Acad Sci USA 2004; 101: 18206-18211.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 18206-18211
-
-
Dittgen, T.1
Nimmerjahn, A.2
Komai, S.3
Licznerski, P.4
Waters, J.5
Margrie, T.W.6
-
16
-
-
0031710033
-
A third-generation lentivirus vector with a conditional packaging system
-
Dull T, Zufferey R, Kelly M, Mandel RJ, Nguyen M, Trono D et al. A third-generation lentivirus vector with a conditional packaging system. J Virol 1998; 72: 8463-8471.
-
(1998)
J Virol
, vol.72
, pp. 8463-8471
-
-
Dull, T.1
Zufferey, R.2
Kelly, M.3
Mandel, R.J.4
Nguyen, M.5
Trono, D.6
-
17
-
-
80455155035
-
SUMO2/3 conjugation is an endogenous neuroprotective mechanism
-
Datwyler AL, Lattig-Tunnemann G, Yang W, Paschen W, Lee SL, Dirnagl U et al. SUMO2/3 conjugation is an endogenous neuroprotective mechanism. J Cereb Blood Flow Metab 2011; 31: 2152-2159.
-
(2011)
J Cereb Blood Flow Metab
, Issue.31
, pp. 2152-2159
-
-
Datwyler, A.L.1
Lattig-Tunnemann, G.2
Yang, W.3
Paschen, W.4
Lee, S.L.5
Dirnagl, U.6
-
18
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li H, Durbin R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 2009; 25: 1754-1760.
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
19
-
-
68549104404
-
The Sequence Alignment/Map format and SAMtools
-
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics 2009; 25: 2078-2079.
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
Homer, N.6
-
20
-
-
3442876969
-
Normalization of real-Time quantitative reverse transcription-PCR data: A model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
-
Andersen CL, Jensen JL, Orntoft TF. Normalization of real-Time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res 2004; 64: 5245-5250.
-
(2004)
Cancer Res
, vol.64
, pp. 5245-5250
-
-
Andersen, C.L.1
Jensen, J.L.2
Orntoft, T.F.3
-
21
-
-
77956266130
-
Statistics in experimental cerebrovascular research: Comparison of more than two groups with a continuous outcome variable
-
Schlattmann P, Dirnagl U. Statistics in experimental cerebrovascular research: comparison of more than two groups with a continuous outcome variable. J Cereb Blood Flow Metab 2010; 30: 1558-1563.
-
(2010)
J Cereb Blood Flow Metab
, Issue.30
, pp. 1558-1563
-
-
Schlattmann, P.1
Dirnagl, U.2
-
22
-
-
30644474460
-
Identification of A Specific Inhibitor of the Histone Methyltransferase SU(VAR) 3-9
-
Greiner D, Bonaldi T, Eskeland R, Roemer E, Imhof A. Identification of a specific inhibitor of the histone methyltransferase SU(VAR)3-9. Nat Chem Biol 2005; 1: 143-145.
-
(2005)
Nat Chem Biol
, vol.1
, pp. 143-145
-
-
Greiner, D.1
Bonaldi, T.2
Eskeland, R.3
Roemer, E.4
Imhof, A.5
-
23
-
-
77950229791
-
Total synthesis of (+)-chaetocin and its analogues: Their histone methyltransferase G9a inhibitory activity
-
Iwasa E, Hamashima Y, Fujishiro S, Higuchi E, Ito A, Yoshida M et al. Total synthesis of (+)-chaetocin and its analogues: their histone methyltransferase G9a inhibitory activity. J Am Chem Soc 2010; 132: 4078-4079.
-
(2010)
J Am Chem Soc
, Issue.132
, pp. 4078-4079
-
-
Iwasa, E.1
Hamashima, Y.2
Fujishiro, S.3
Higuchi, E.4
Ito, A.5
Yoshida, M.6
-
24
-
-
33846783261
-
Reversal of H3K9me2 by a small-molecule inhibitor for the G9a histone methyltransferase
-
Kubicek S, O'Sullivan RJ, August EM, Hickey ER, Zhang Q, Teodoro ML et al. Reversal of H3K9me2 by a small-molecule inhibitor for the G9a histone methyltransferase. Mol Cell 2007; 25: 473-481.
-
(2007)
Mol Cell
, vol.25
, pp. 473-481
-
-
Kubicek, S.1
O'Sullivan, R.J.2
August, E.M.3
Hickey, E.R.4
Zhang, Q.5
Teodoro, M.L.6
-
25
-
-
84899684448
-
Histone acetylation and CREB binding protein are required for neuronal resistance against ischemic injury
-
Yildirim F, Ji S, Kronenberg G, Barco A, Olivares R, Benito E et al. Histone acetylation and CREB binding protein are required for neuronal resistance against ischemic injury. PLoS ONE 2014; 9: e95465.
-
(2014)
PLoS ONE
, Issue.9
, pp. e95465
-
-
Yildirim, F.1
Ji, S.2
Kronenberg, G.3
Barco, A.4
Olivares, R.5
Benito, E.6
-
26
-
-
61349088682
-
The histone demethylases JMJD1A and JMJD2B are transcriptional targets of hypoxia-inducible factor HIF
-
Beyer S, Kristensen MM, Jensen KS, Johansen JV, Staller P. The histone demethylases JMJD1A and JMJD2B are transcriptional targets of hypoxia-inducible factor HIF. J Biol Chem 2008; 283: 36542-36552.
-
(2008)
J Biol Chem
, vol.283
, pp. 36542-36552
-
-
Beyer, S.1
Kristensen, M.M.2
Jensen, K.S.3
Johansen, J.V.4
Staller, P.5
-
27
-
-
84876923460
-
Vascular endothelial growth factors (VEGFs) and stroke
-
Greenberg DA, Jin K. Vascular endothelial growth factors (VEGFs) and stroke. Cell Mol Life Sci 2013; 70: 1753-1761.
-
(2013)
Cell Mol Life Sci
, Issue.70
, pp. 1753-1761
-
-
Greenberg, D.A.1
Jin, K.2
-
28
-
-
84925009678
-
Histone methylation patterns in astrocytes are influenced by age following ischemia
-
Chisholm N, Henderson M, Selvamani A, Park MJ, Dindot S, Miranda R et al. Histone methylation patterns in astrocytes are influenced by age following ischemia. Epigenetics 2015; 10: 142-152.
-
(2015)
Epigenetics
, Issue.10
, pp. 142-152
-
-
Chisholm, N.1
Henderson, M.2
Selvamani, A.3
Park, M.J.4
Dindot, S.5
Miranda, R.6
-
29
-
-
84859979612
-
Repressor element-1 silencing transcription factor (REST)-dependent epigenetic remodeling is critical to ischemia-induced neuronal death
-
Noh KM, Hwang JY, Follenzi A, Athanasiadou R, Miyawaki T, Greally JM et al. Repressor element-1 silencing transcription factor (REST)-dependent epigenetic remodeling is critical to ischemia-induced neuronal death. Proc Natl Acad Sci USA 2012; 109: E962-E971.
-
(2012)
Proc Natl Acad Sci USA
, Issue.109
, pp. E962-E971
-
-
Noh, K.M.1
Hwang, J.Y.2
Follenzi, A.3
Athanasiadou, R.4
Miyawaki, T.5
Greally, J.M.6
-
30
-
-
77950858804
-
Epigenetic chromatin modifications in the cortical spreading depression
-
Passaro D, Rana G, Piscopo M, Viggiano E, De Luca B, Fucci L. Epigenetic chromatin modifications in the cortical spreading depression. Brain Res 2010; 1329: 1-9.
-
(2010)
Brain Res
, Issue.1329
, pp. 1-9
-
-
Passaro, D.1
Rana, G.2
Piscopo, M.3
Viggiano, E.4
De Luca, B.5
Fucci, L.6
-
31
-
-
84863986883
-
Cortical spreading depression differentially affects lysine methylation of H3 histone at neuroprotective genes and retrotransposon sequences
-
Rana G, Donizetti A, Virelli G, Piscopo M, Viggiano E, De Luca B et al. Cortical spreading depression differentially affects lysine methylation of H3 histone at neuroprotective genes and retrotransposon sequences. Brain Res 2012; 1467: 113-119.
-
(2012)
Brain Res
, Issue.1467
, pp. 113-119
-
-
Rana, G.1
Donizetti, A.2
Virelli, G.3
Piscopo, M.4
Viggiano, E.5
De Luca, B.6
-
32
-
-
79960493567
-
A chemical probe selectively inhibits G9a and GLP methyltransferase activity in cells
-
Vedadi M, Barsyte-Lovejoy D, Liu F, Rival-Gervier S, Allali-Hassani A, Labrie V et al. A chemical probe selectively inhibits G9a and GLP methyltransferase activity in cells. Nat Chem Biol 2011; 7: 566-574.
-
(2011)
Nat Chem Biol
, Issue.7
, pp. 566-574
-
-
Vedadi, M.1
Barsyte-Lovejoy, D.2
Liu, F.3
Rival-Gervier, S.4
Allali-Hassani, A.5
Labrie, V.6
-
33
-
-
84887923349
-
Discovery of an in vivo chemical probe of the lysine methyltransferases G9a and GLP
-
Liu F, Barsyte-Lovejoy D, Li F, Xiong Y, Korboukh V, Huang XP et al. Discovery of an in vivo chemical probe of the lysine methyltransferases G9a and GLP. J Med Chem 2013; 56: 8931-8942.
-
(2013)
J Med Chem
, Issue.56
, pp. 8931-8942
-
-
Liu, F.1
Barsyte-Lovejoy, D.2
Li, F.3
Xiong, Y.4
Korboukh, V.5
Huang, X.P.6
-
34
-
-
84874041667
-
Chaetocin is a nonspecific inhibitor of histone lysine methyltransferases
-
Cherblanc FL, Chapman KL, Brown R, Fuchter MJ. Chaetocin is a nonspecific inhibitor of histone lysine methyltransferases. Nat Chem Biol 2013; 9: 136-137.
-
(2013)
Nat Chem Biol
, Issue.9
, pp. 136-137
-
-
Cherblanc, F.L.1
Chapman, K.L.2
Brown, R.3
Fuchter, M.J.4
-
35
-
-
84887903603
-
On the histone lysine methyltransferase activity of fungal metabolite chaetocin
-
Cherblanc FL, Chapman KL, Reid J, Borg AJ, Sundriyal S, Alcazar-Fuoli L et al. On the histone lysine methyltransferase activity of fungal metabolite chaetocin. J Med Chem 2013; 56: 8616-8625.
-
(2013)
J Med Chem
, Issue.56
, pp. 8616-8625
-
-
Cherblanc, F.L.1
Chapman, K.L.2
Reid, J.3
Borg, A.J.4
Sundriyal, S.5
Alcazar-Fuoli, L.6
-
36
-
-
70350133780
-
Valproic acid induces functional heat-shock protein 70 via Class i histone deacetylase inhibition in cortical neurons: A potential role of Sp1 acetylation
-
Marinova Z, Ren M, Wendland JR, Leng Y, Liang MH, Yasuda S et al. Valproic acid induces functional heat-shock protein 70 via Class I histone deacetylase inhibition in cortical neurons: a potential role of Sp1 acetylation. J Neurochem 2009; 111: 976-987.
-
(2009)
J Neurochem
, vol.111
, pp. 976-987
-
-
Marinova, Z.1
Ren, M.2
Wendland, J.R.3
Leng, Y.4
Liang, M.H.5
Yasuda, S.6
-
37
-
-
38149116286
-
Pulse inhibition of histone deacetylases induces complete resistance to oxidative death in cortical neurons without toxicity and reveals a role for cytoplasmic p21(waf1/ cip1) in cell cycle-independent neuroprotection
-
Langley B, D'Annibale MA, Suh K, Ayoub I, Tolhurst A, Bastan B et al. Pulse inhibition of histone deacetylases induces complete resistance to oxidative death in cortical neurons without toxicity and reveals a role for cytoplasmic p21(waf1/ cip1) in cell cycle-independent neuroprotection. J Neurosci 2008; 28: 163-176.
-
(2008)
J Neurosci
, vol.28
, pp. 163-176
-
-
Langley, B.1
D'Annibale, M.A.2
Suh, K.3
Ayoub, I.4
Tolhurst, A.5
Bastan, B.6
-
38
-
-
0036914074
-
Lithium induces brain-derived neurotrophic factor and activates TrkB in rodent cortical neurons: An essential step for neuroprotection against glutamate excitotoxicity
-
Hashimoto R, Takei N, Shimazu K, Christ L, Lu B, Chuang DM. Lithium induces brain-derived neurotrophic factor and activates TrkB in rodent cortical neurons: an essential step for neuroprotection against glutamate excitotoxicity. Neuropharmacology 2002; 43: 1173-1179.
-
(2002)
Neuropharmacology
, vol.43
, pp. 1173-1179
-
-
Hashimoto, R.1
Takei, N.2
Shimazu, K.3
Christ, L.4
Lu, B.5
Chuang, D.M.6
-
39
-
-
84892375347
-
BDNF mediates neuroprotection against oxygen-glucose deprivation by the cardiac glycoside oleandrin
-
Van Kanegan MJ, He DN, Dunn DE, Yang P, Newman RA, West AE et al. BDNF mediates neuroprotection against oxygen-glucose deprivation by the cardiac glycoside oleandrin. J Neurosci 2014; 34: 963-968.
-
(2014)
J Neurosci
, Issue.34
, pp. 963-968
-
-
Van Kanegan, M.J.1
He, D.N.2
Dunn, D.E.3
Yang, P.4
Newman, R.A.5
West, A.E.6
-
40
-
-
84881480358
-
Effect of HDAC inhibitors on neuroprotection and neurite outgrowth in primary rat cortical neurons following ischemic insult
-
Hasan MR, Kim JH, Kim YJ, Kwon KJ, Shin CY, Kim HY et al. Effect of HDAC inhibitors on neuroprotection and neurite outgrowth in primary rat cortical neurons following ischemic insult. Neurochem Res 2013; 38: 1921-1934.
-
(2013)
Neurochem Res
, vol.38
, pp. 1921-1934
-
-
Hasan, M.R.1
Kim, J.H.2
Kim, Y.J.3
Kwon, K.J.4
Shin, C.Y.5
Kim, H.Y.6
-
41
-
-
67651146826
-
The HDAC inhibitor, sodium butyrate, stimulates neurogenesis in the ischemic brain
-
Kim HJ, Leeds P, Chuang DM. The HDAC inhibitor, sodium butyrate, stimulates neurogenesis in the ischemic brain. J Neurochem 2009; 110: 1226-1240.
-
(2009)
J Neurochem
, vol.110
, pp. 1226-1240
-
-
Kim, H.J.1
Leeds, P.2
Chuang, D.M.3
-
42
-
-
84901001266
-
HDAC inhibitors mitigate ischemia-induced oligodendrocyte damage: Potential roles of oligodendrogenesis, VEGF, and anti-inflammation
-
Kim HJ, Chuang DM. HDAC inhibitors mitigate ischemia-induced oligodendrocyte damage: potential roles of oligodendrogenesis, VEGF, and anti-inflammation. Am J Transl Res 2014; 6: 206-223.
-
(2014)
Am J Transl Res
, Issue.6
, pp. 206-223
-
-
Kim, H.J.1
Chuang, D.M.2
|