Identification of a set of conserved eukaryotic internal retention time standards for dataindependent acquisition mass spectrometry

Molecular and Cellular Proteomics

Volumn 14, Issue 10, 2015, Pages 2800-2813

  Parker, Sarah J ^c   Rost, Hannes ^b,c   Rosenberger, George ^b,c   Collins, Ben C ^b   Malmström, Lars ^c   Amodei, Dario ^d   Venkatraman, Vidya ^e   Raedschelders, Koen ^e   Van Eyk, Jennifer E ^a,e   Aebersold, Ruedi ^b,c  

^a JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b ETH ZURICH   (Switzerland)

^c UNIVERSITY OF ZURICH   (Switzerland)

^d STANFORD UNIVERSITY   (United States)

^e CEDARS SINAI MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIN; ADENINE NUCLEOTIDE TRANSLOCASE; GTP BINDING NUCLEAR PROTEIN CNR1; GTP BINDING NUCLEAR PROTEIN GSP1; HEAT SHOCK PROTEIN; HEAT SHOCK PROTEIN SSA3; PEPTIDE; PROTEIN 14 3 3; RAN PROTEIN; TRYPSIN; UNCLASSIFIED DRUG; PEPTIDE LIBRARY;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; CELL FRACTIONATION; CELL LYSATE; COMMON INTERNAL RETENTION TIME STANDARD; COMPARATIVE STUDY; DATA ANALYSIS; DATA COLLECTION METHOD; DATA INDEPENDENT ACQUISITION; EUKARYOTE; FRACTIONATION; HUMAN; HUMAN CELL; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; NONHUMAN; PEPTIDE ANALYSIS; PREDICTION; PRIORITY JOURNAL; PROTEOMICS; QUANTITATIVE ANALYSIS; REVERSED PHASE LIQUID CHROMATOGRAPHY; VASCULAR SMOOTH MUSCLE CELL; WORKFLOW; ANIMAL; CELL LINE; HEK293 CELL LINE; MOUSE; PEPTIDE LIBRARY; PROCEDURES; STANDARDS; TIME FACTOR; YEAST;

ANIMALS; CELL LINE; CHROMATOGRAPHY, LIQUID; HEK293 CELLS; HUMANS; MASS SPECTROMETRY; MICE; PEPTIDE LIBRARY; PEPTIDES; PROTEOMICS; TIME FACTORS; YEASTS;

EID: 84942909864     PISSN: 15359476     EISSN: 15359484     Source Type: Journal    
DOI: 10.1074/mcp.O114.042267     Document Type: Article

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