Structure of the K12 capsule containing 5,7-di-N-acetylacinetaminic acid from Acinetobacter baumannii isolate D36

Glycobiology

Volumn 25, Issue 8, 2015, Pages 881-887

  Kenyon, Johanna J ^a,c   Marzaioli, Alberto M ^b   Hall, Ruth M ^a   De Castro, Cristina ^b  

^a UNIVERSITY OF SYDNEY   (Australia)

^b UNIVERSITY OF NAPLES FEDERICO II   (Italy)

^c QUEENSLAND UNIVERSITY OF TECHNOLOGY   (Australia)

Author keywords

Acinetaminic acid; Acinetobacter baumannii; Capsular polysaccharide; K locus; KL12 gene cluster

Indexed keywords

BACTERIAL POLYSACCHARIDE; GLYCOSYLTRANSFERASE; K LOCUS 12 CAPSULAR POLYSACCHARIDE; N ACETYL DEXTRO FUCOSAMINE; N ACETYL FUCOSAMINE; N ACETYLGALACTOSAMINE; TRANSFERASE; UNCLASSIFIED DRUG; CAPSULAR POLYSACCHARIDE K12; FUCOSE; N-ACETYLFUCOSAMINE; SIALIC ACID DERIVATIVE;

ACINETOBACTER BAUMANNII; ARTICLE; BACTERIUM ISOLATE; CARBOHYDRATE ANALYSIS; CHEMICAL ANALYSIS; GENE CLUSTER; HETERONUCLEAR MULTIPLE BOND CORRELATION; HETERONUCLEAR SINGLE QUANTUM COHERENCE; NONHUMAN; NUCLEAR OVERHAUSER EFFECT; PRIORITY JOURNAL; PROTEIN FAMILY; PROTON NUCLEAR MAGNETIC RESONANCE; PSEUDOMONAS AERUGINOSA; SYNTHESIS; ANALOGS AND DERIVATIVES; BACTERIAL CAPSULE; CHEMISTRY; ENZYMOLOGY; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR GENETICS;

ACETYLGALACTOSAMINE; ACINETOBACTER BAUMANNII; BACTERIAL CAPSULES; CARBOHYDRATE SEQUENCE; FUCOSE; GLYCOSYLTRANSFERASES; MOLECULAR SEQUENCE DATA; SIALIC ACIDS;

EID: 84942235576     PISSN: 09596658     EISSN: 14602423     Source Type: Journal    
DOI: 10.1093/glycob/cwv028     Document Type: Article

References (64)

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30. Vinogradov E, MacLean L, Xu HH, Chen W. 2014. The structure of the polysaccharide isolated from Acinetobacter baumannii strain LAC-4. Carbohydr Res. 390: 42-45.
31. Willis L, Whitfield C. 2013. KpsC and KpsS are retaining 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) transferases involved in synthesis of bacterial capsules. Proc Natl Acad Sci USA 110: 20753-20758.
32. Zarrilli R, Pournaras S, Giannouli M, Tsakris A. 2013. Global evolution of multidrug-resistant Acinetobacter baumannii clonal lineages. Int J Antimicrob Agents. 41: 11-19.
33. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol. 215: 403-410.
34. Antunes LCS, Visca P, Towner KJ. 2014. Acinetobacter baumannii: evolution of a global pathogen. Pathog Dis. 71(3):292-301.
35. De Castro C, Parrilli M, Holst O, Mollinaro A. 2010. Microbe-associated molecular patterns in innate immunity: Extraction and chemical analysis of Gram-negative bacterial lipopolysaccharides. Methods Enzymol. 480: 89-115.
36. Dean CR, Franklund CV, Retief JD, Coyne MJ Jr, Hatano DJ, Evans DJ, Pier GB, Goldberg JB. 1999. Characterization of the serogroup O11 O-antigen locus of Pseudomonas aeruginosa PA103. J Bacteriol. 181: 4275-4284.
37. Fregolino E, Gargiulo V, Lanzetta R, Parrilli M, Holst O, De Castro C. 2011. Identification and structural determination of the capsular polysaccharides from two Acinetobacter baumannii clinical isolates, MG1 and SMAL. Carbohydr Res. 346: 973-977.
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39. Hamidian M, Hall RM. 2011. AbaR4 replaces AbaR3 in a carbapenem-resistant Acinetobacter baumannii isolate belonging to global clone 1 from an Australian hospital. J Antimicrob Chemother. 66: 2484-2491.
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44. Karah N, Sundsfjord A, Towner K, Samuelsen Ø. 2012. Insights into the global molecular epidemiology of carbapenem non-susceptible clones of Acineto-bacter baumannii. Drug Resist Updat. 15: 237-247.
45. Kenyon JJ, Hall RM. 2013. Variation in the complex carbohydrate biosynthesis loci of Acinetobacter baumannii genomes. PLoS One. 8: e62160.
46. Kenyon JJ, Marzaioli AM, De Castro C, Hall RM. 2015. 5,7-di-N-acetyl-acinetaminic acid - a novel non-2-ulosonic acid found in the capsule of an Acinetobacter baumannii isolate. Glycobiology. 25: 644-654.
47. Kenyon JJ, Marzaioli AM, Hall RM, De Castro C. 2014. Structure of the K2 structure associated with the KL2 gene cluster of Acinetobacter baumannii. Glycobiology. 24: 554-563.
48. Kenyon JJ, Marzaioli AM, Hall RM, De Castro C. 2015. Structure of the K6 capsular polysaccharide from Acinetobacter baumannii isolate RBH4. Carbohydr Res. 409: 30-35.
49. Kenyon JJ, Nigro SJ, Hall RM. 2014. Variation in the OC locus of Acinetobacter baumannii genomes predicts extensive structural diversity in the lipoli-gosaccharide. PLoS One. 9: e107833.
50. Lees-Miller RG, Iwashkiw JA, Scott NE, Seper A, Vinogradov E, Schild S, Feldman MF. 2013. A common pathway for O-linked protein-glycosylation and synthesis of capsule in Acinetobacter baumannii. Mol Microbiol. 89 (5):816-830.
51. 13C-N.M.R. data. Carbohydr Res. 175: 59-75.
52. Lombard V, Golaconda Ramulu H, Drula E, Coutinho P, Henrissat B. 2014. The carbohydrate-active enzymes database (CAZy) in 2013. Nucleic Acids Res. 42: D490-D495.
53. Perepelov A, Liu B, Senchenkova S, Shashkov A, Feng L, Wang L, Knirel Y. 2010. Structure of the O-antigen and characterisation of the O-antigen gene cluster of Escherichia coli O108 containing 5,7-diacetamido-3,5,7,9-tetradeoxy-L-glycero-D-galacto-non-2-ulosonic (8-epilegionaminic) acid. Biochemistry (Mosc). 75(1):19-24.
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55. Russo TA, Beanan JM, Olson R, MacDonald U, Cox AD, St. Michael F, Vinogradov EV, Spellberg B, Luke-Marshall NR, Campagnari AA. 2013. The K1 capsular polysaccharide from Acinetobacter baumannii is a potential therapeutic target via passive immunization. Infect Immun. 81(3):915-922.
56. Senchenkova SN, Popova AV, Shashkov AS, Shneider MM, Mei Z, Arbatsky NP, Liu B, Miroshnikov KA, Volozhantsev NV, Knirel YA. 2015. Structure of a new pseudaminic-acid containing capsular polysaccharide of Acinetobacter baumannii LUH5550 having the KL42 capsule biosynthesis locus. Carbohydr Res. 407: 154-157.
57. Senchenkova SN, Shashkov AS, Popova AV, Shneider MM, Arbatsky NP, Miroshinikov KA, Volozhantsev NV, Knirel YA. 2015. Structure elucidation of the capsular polysaccharide of Acinetobacter baumannii AB5075 having the KL25 capsule biosynthesis locus. Carbohydr Res. 408: 8-11.
58. Senchenkova SN, Shashkov AS, Shneider MM, Arbatsky NP, Popova AV, Miroshnikov KA, Volozhantsev NV, Knirel YA. 2014. Structure of the cap-sular polysaccharide of Acinetobacter baumannii ACICU containing di-N-acetylpseudaminic acid. Carbohydr Res. 391: 89-92.
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62. Vinogradov E, MacLean L, Xu HH, Chen W. 2014. The structure of the polysaccharide isolated from Acinetobacter baumannii strain LAC-4. Carbohydr Res. 390: 42-45.
63. Willis L, Whitfield C. 2013. KpsC and KpsS are retaining 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) transferases involved in synthesis of bacterial capsules. Proc Natl Acad Sci USA 110: 20753-20758.
64. Zarrilli R, Pournaras S, Giannouli M, Tsakris A. 2013. Global evolution of multidrug-resistant Acinetobacter baumannii clonal lineages. Int J Antimicrob Agents. 41: 11-19.