The long road to recombinase-mediated plant transformation

Plant Biotechnology Journal

Volumn 14, Issue 2, 2016, Pages 441-447

  Ow, David W ^a  

^a SOUTH CHINA INSTITUTE OF BOTANY   (China)

Author keywords

Genetic engineering; Site specific recombination; Transgenic plants

Indexed keywords

RECOMBINASE;

GENETIC RECOMBINATION; GENETIC TRANSFORMATION; METABOLISM; PLANT GENE; TRANSGENIC PLANT;

GENES, PLANT; PLANTS, GENETICALLY MODIFIED; RECOMBINASES; RECOMBINATION, GENETIC; TRANSFORMATION, GENETIC;

EID: 84941764459     PISSN: 14677644     EISSN: 14677652     Source Type: Journal    
DOI: 10.1111/pbi.12472     Document Type: Article

References (42)

1. Albert, H., Dale, E.C., Lee, E. and Ow, D.W. (1995) Site-specific integration of DNA into wild type and mutant lox sites placed in the plant genome. Plant J. 7, 649-659.
2. Araki, K., Araki, M., Miyazaki, J. and Vassalli, P. (1997) Targeted integration of DNA using mutant lox sites in embryonic stem cells. Nucleic Acids Res. 25, 868-872.
3. Broach, J.R., Guarascio, V.R. and Jayaram, M. (1982) Recombination within the yeast plasmid 2mμ circle is site-specific. Cell, 29, 227-234.
4. Calos, M.P. (2003) Methods and composition for genomic modification. U. S. Patent 6, 632, 672, issued October 14, 2003.
5. Dale, E.C. and Ow, D.W. (1990) Intra- and intermolecular site-specific recombination in plant cells mediated by bacteriophage P1 recombinase. Gene, 91, 79-85.
6. Dale, E.C. and Ow, D.W. (1991) Gene-Transfer with Subsequent Removal of the Selection Gene from the Host Genome. Proc. Natl Acad. Sci. USA, 88, 10558-10562.
7. Day, C.D., Lee, E., Kobayashi, J., Holappa, L.D., Albert, H. and Ow, D.W. (2000) DNA integration into the same chromosome location can produce transgene alleles that express at a predictable level, or alleles that are differentially silenced. Genes Dev. 14, 2869-2880.
8. Goring, D.R., Thomson, L. and Rothstein, S.J. (1991) Transformation of a partial nopaline synthase gene into tobacco suppresses the expression of a resident wild type gene. Proc. Natl Acad. Sci. USA, 88, 1770-1774.
9. Groth, A.C., Olivares, E.C., Thyagarajan, B. and Calos, M.P. (2000) A phage integrase directs efficient site-specific integration in human cells. Proc. Natl Acad. Sci. USA, 97, 5995-6000.
10. Hou, L.L., Yau, Y.Y., Wei, J.J., Han, Z.G., Dong, Z.C. and Ow, D.W. (2014) An open-source system for in planta gene stacking by Bxb1 and Cre recombinases. Mol. Plant, 7, 1756-1765.
11. Kahn, M., Ow, D., Sauer, B., Rabinowitz, A. and Calendar, R. (1980) Genetic analysis of bacteriophage P4 using P4-plasmid ColE1 hybrids. Mol. Gen. Genet. 177, 399-412.
12. Kimura, Y., Ding, B., Imai, N., Nolan, D.J., Butler, J.M. and Rafii, S. (2011) c-Kit-mediated functional positioning of stem cells to their niches is essential for maintenance and regeneration of adult hematopoiesis. PLoS ONE, 6, e26918.
13. Koshinsky, H.A., Lee, E. and Ow, D.W. (2000) Cre-lox site-specific recombination between Arabidopsis and tobacco chromosomes. Plant J. 23, 715-722.
14. Matzke, M.A. and Matzke, A.J.M. (1991) Differential inactivation and methylation of a transgene in plants by two suppressor loci containing homologous sequences. Plant Mol. Biol. 16, 821-830.
15. Netherwood, T., Martín-Orúe, S.M., O'Donnell, A.G., Gockling, S., Graham, J., Mathers, J.C. and Gilbert, H.J. (2004) Assessing the survival of transgenic plant DNA in the human gastrointestinal tract. Nat. Biotechnol. 22, 204-209.
16. Oberdoerffer, P., Otipoby, K.L., Maruyama, M. and Rajewsky, K. (2003) Unidirectional Cre-mediated genetic inversion in mice using the mutant loxP pair lox66/lox71. Nucleic Acids Res. 31, e140.
17. Odell, J.T., Caimi, P.G., Sauer, B. and Russell, S.H. (1990) Site-directed recombination in the genome of transgenic tobacco. Mol. Gen. Genet. 223, 369-378.
18. Odell, J.T., Russell, S.H., Sauer, B.L., Hsu, F.C. and Shen, J.B.-J. (1997) Site-specific recombination of DNA in plant cells. U. S. Patent 5, 658, 772, issued August 19. 1997.
19. Ow, D.W. (2003) Site-specific gene stacking method. In Plant Biotechnology 2002 and Beyond (Vasil, I.K., ed), pp. 215-218. Dordrecht: Kluwer Academic Press.
20. Ow, D.W. (2005) Transgene management via multiple site-specific recombi-nation systems. In Vitro Cell. Devel. Biol. Plant, 41, 213-219.
21. Ow, D.W. (2007) GM maize from site-specific recombination technology, what next? Curr. Opin. Biotechnol. 18, 115-120.
22. Ow, D.W. (2011) Recombinase-mediated gene stacking as a transformation operating System. J. Integr. Plant Biol. 53, 512-519.
23. Ow, D.W. and Ausubel, F.M. (1983) Conditionally replicating plasmid vectors that can integrate into the Klebsiella pneumoniae chromosome via bacteriophage P4 site-specific recombination. J. Bacteriol. 155, 704-713.
24. Ow, D.W. and Dale, E.C. (1991) Selection-gene-free transgenic plants. U.S. patent application 9205640, WO93/01283, priority date July 8, 1991.
25. Ow, D.W., Wood, K.V., DeLuca, M., de Wet, J.R., Helinski, D.R. and Howell, S.H. (1986) Transient and stable expression of the firefly luciferase gene in plant cells and transgenic plants. Science, 234, 856-859.
26. Ow, D.W., Calendar, R. and Thomason, L. (2004) DNA recombination in eucaryotic cells by the bacteriophage phiC31 recombination system. U. S. Patent 6, 746, 870, issued June 8, 2004.
27. Qin, M., Bayley, C., Stockton, T. and Ow, D.W. (1994) Cre recombinase mediated site-specific recombination between plant chromosomes. Proc. Natl Acad. Sci. USA, 91, 1706-1710.
28. Russell, S.H., Hoopes, J.L. and Odell, J.T. (1992) Directed excision of a transgene from the plant genome. Mol. Gen. Genet. 234, 49-59.
29. Sauer, B. (1987) Functional expression of the cre-lox site-specific recombination system in the yeast Saccharomyces cerevisiae. Mol. Cell. Biol. 7, 2087-2096.
30. Sauer, B.L. (1990) Site-specific recombination of DNA in eukaryotic cells. U. S. Patent 4, 959, 317, issued September 25, 1990.
31. Sauer, B., Ow, D., Ling, L. and Calendar, R. (1981) Mutants of satellite bacteriophage P4 that are defective in the suppression of transcriptional polarity. J. Mol. Biol. 145, 29-46.
32. Srivastava, V. and Ow, D.W. (2001) Single copy primary transformants of maize obtained through the co-introduction of a recombinase-expressing construct. Plant Mol. Biol. 46, 561-566.
33. Srivastava, V. and Ow, D.W. (2002) Biolistic mediated site-specific integration in rice. Mol. Breed. 8, 345-350.
34. Srivastava, V., Anderson, O.D. and Ow, D.W. (1999) Single-copy transgenic wheat generated through the resolution of complex integration patterns. Proc. Natl Acad. Sci. USA, 96, 11117-11121.
35. Srivastava, V., Aria-Nieto, M. and Wilson, A.J. (2004) Cre-mediated site-specific gene integration for consistent transgene expression in rice. Plant Biotechnol. J. 2, 169-179.
36. Sugita, K., Kasahara, T., Matsunaga, E. and Ebinuma, H. (2000) A transformation vector for the production of marker-free transgenic plants containing a single copy transgene at high frequency. Plant J. 22, 461-469.
37. Thomason, L.C., Calendar, R.C. and Ow, D.W. (2001) Gene insertion and replacement in Schizosaccharomyces pombe mediated by the Streptomyces bacteriophage phiC31 site-specific recombination system. Mol. Genet. Genomics, 265, 1031-1038.
38. Thomson, J.G. and Ow, D.W. (2006) Site-specific recombination systems for the genetic manipulation of eukaryotic genomes. Genesis, 44, 465-476.
39. Thorpe, H.M. and Smith, M.C.M. (1998) In vitro site-specific integration of bacteriophage DNA catalyzed by a recombinase of the resolvase/invertase family. Proc. Natl Acad. Sci. USA, 95, 5505-5510.
40. Yau, Y.Y., Wang, Y., Thomson, J.G. and Ow, D.W. (2011) Method for Bxb1-mediated site-specific integration in planta. Methods Mol. Biol. 701, 147-166.
41. Zhang, Z. and Lutz, B. (2002) Cre recombinase-mediated inversion using lox66 and lox71: method to introduce conditional point mutations into the CREB-binding protein. Nucleic Acids Res. 30, e90.
42. Zuo, J., Niu, Q.-W., Møller, S.G. and Chua, N.-H. (2001) Chemical-regulated, site-specific DNA excision in transgenic plants. Nat. Biotechnol. 19, 157-161.