GenoExp: A web tool for predicting gene expression levels from single nucleotide polymorphisms

Bioinformatics

Volumn 31, Issue 11, 2015, Pages 1848-1850

  Manor, Ohad ^a,b   Segal, Eran ^a  

^a WEIZMANN INSTITUTE OF SCIENCE   (Israel)

^b UNIVERSITY OF WASHINGTON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL MODEL; CELL LINE; COMPUTER PROGRAM; GENE EXPRESSION PROFILING; HUMAN; INTERNET; SINGLE NUCLEOTIDE POLYMORPHISM;

CELL LINE; GENE EXPRESSION PROFILING; HUMANS; INTERNET; MODELS, GENETIC; POLYMORPHISM, SINGLE NUCLEOTIDE; SOFTWARE;

EID: 84941625652     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btv050     Document Type: Conference Paper

References (11)

1. Altshuler, D. M. et al. (2010) Integrating common and rare genetic variation in diverse human populations. Nature, 467, 52-58.
2. Gibbs, J. R. et al. (2010) Abundant quantitative trait loci exist for DNA methylation and gene expression in human brain. PLoS Genet. , 6, e1000952.
3. Griswold, A. J. et al. (2011) A de novo 1. 5Mb microdeletion on chromosome 14q23. 2-23. 3 in a patient with autism and spherocytosis. Autism Res. , 4, 221-227.
4. Grundberg, E. et al. (2012) Mapping cis-and trans-regulatory effects across multiple tissues in twins. Nat. Genet. , 44, 1084-1089.
5. Howie, B. et al. (2011) Genotype imputation with thousands of genomes. G3, 1, 457-470.
6. Howie, B. N. et al. (2009) A flexible and accurate genotype imputation method for the next generation of genome-wide association studies. PLoS Genet. , 5, e1000529.
7. Lonsdale, J. et al. (2013) The Genotype-Tissue Expression (GTEx) project. Nat. Genet. , 45, 580-585.
8. Manor, O. and Segal, E. (2013) Robust prediction of expression differences among human individuals using only genotype information. PLoS Genet. , 9, e1003396.
9. Sheng, G. et al. (2003) Churchill, a zinc finger transcriptional activator, regulates the transition between gastrulation and neurulation. Cell, 115, 603-613.
10. Stranger, B. E. et al. (2012) Patterns of cis regulatory variation in diverse human populations. PLoS Genet. , 8, e1002639.
11. Yang, Y. et al. (2012) Autocrine motility factor receptor is involved in the process of learning and memory in the central nervous system. Behav. Brain Res. , 229, 412-418.