Progressive alignment of genomic signals by multiple dynamic time warping

Journal of Theoretical Biology

Volumn 385, Issue , 2015, Pages 20-30

  Skutkova, Helena ^a   Vitek, Martin ^a,b   Sedlar, Karel ^a   Provaznik, Ivo ^a,b  

^a BRNO UNIVERSITY OF TECHNOLOGY   (Czech Republic)

^b ST ANNE S UNIVERSITY HOSPITAL   (Czech Republic)

Author keywords

Correlation; Genomic signal processing; Multiple alignment; Phylogenetic tree; Similarity distance

Indexed keywords

RNA 16S; RNA 18S; BACTERIAL RNA;

CORRELATION; GENOME; NUMERICAL MODEL; PHYLOGENETICS; SIGNAL PROCESSING;

ACCURACY; ARTICLE; BACTERIAL GENE; CLUSTER ANALYSIS; CORRELATION COEFFICIENT; DNA MODIFICATION; DYNAMIC TIME WARPING; GENETIC ALGORITHM; GENETIC CONSERVATION; GENETIC SIMILARITY; INTERSPECIFIC VARIATION; INTRASPECIFIC VARIATION; MATHEMATICAL ANALYSIS; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; SCORING SYSTEM; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY; SIGNAL TRANSDUCTION; SLIDING WINDOW; ALGORITHM; ANIMAL; BACTERIAL GENOME; BIOLOGY; GENETICS; GENOMICS; PROCEDURES; SIGNAL PROCESSING; SPECIES DIFFERENCE;

ALGORITHMS; ANIMALS; COMPUTATIONAL BIOLOGY; GENOME, BACTERIAL; GENOMICS; PHYLOGENY; RNA, BACTERIAL; RNA, RIBOSOMAL, 18S; SEQUENCE ALIGNMENT; SIGNAL PROCESSING, COMPUTER-ASSISTED; SPECIES SPECIFICITY;

EID: 84941617346     PISSN: 00225193     EISSN: 10958541     Source Type: Journal    
DOI: 10.1016/j.jtbi.2015.08.007     Document Type: Article

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