Colletotrichum fructicola is the dominant and one of the most aggressive species causing bitter rot of apple in Uruguay

Tropical Plant Pathology

Volumn 40, Issue 4, 2015, Pages 265-274

  Alaniz, Sandra ^a   Hernández, Laura ^a   Mondino, Pedro ^a  

^a UNIVERSIDAD DE LA REPÚBLICA   (Uruguay)

Author keywords

Colletotrichum acutatum species complex; Colletotrichum gloeosporioides species complex; Malus; Multi gene phylogeny

Indexed keywords

EID: 84941099897     PISSN: 19825676     EISSN: 19832052     Source Type: Journal    
DOI: 10.1007/s40858-015-0025-9     Document Type: Article

References (44)

1. Agostini JP, Timmer LW, Mitchell DJ (1992) Morphological and pathological characteristics of strains of Colletotrichum gloeosporioides from citrus. Phytopatology 82:1377–1382
2. Alaniz S, Hernández L, Damasco D, Mondino P (2012) First report of Colletotrichum acutatum and C. fragariae causing bitter rot of apple in Uruguay. Plant Dis 96:458–458
3. Baroncelli R, Sreenivasaprasad S, Thon MR, Sukno SA (2014) First report of apple bitter rot caused by Colletotrichum godetiae in the UK. Plant Dis 98:1000
4. Brooks AN (1931) Anthracnose of strawberry caused by Colletotrichum fragariae. n. sp. Phytopathology 22:739–744
5. Cannon PF, Damm U, Johnston PR, Weir BS (2012) Colletotrichum - current status and future directions. Stud Mycol 73:181–213
6. Damm U, Cannon PF, Wondenberg JHC, Crous PW (2012a) The Colletotrichum acutaum species complex. Stud Mycol 73:37–113
7. Damm U, Cannon PF, Wondenberg JHC, Johnston PR, Weir BS, Tan YP, Shivas RG, Crous PW (2012b) The Colletotrichum boninense species complex. Stud Mycol 73:1–3
8. Denardi F, Berton O, Spengler MM (2003) Resistência genética à podridão amarga em maçãs, determinadas pela taxa de desenvolvimento da doença em frutos com e sem ferimentos. Rev Bras Frutic 25:375–558
9. Faedda R, Agosteo GE, Schena L, Mosca S, Frisullo S, Magnano Di San Lio G, Cacciola O (2011) Colletotrichum clavatum sp. nov. identified as the causal agent of olive anthracnose in Italy. Phytopathol Mediterr 50:283–302
10. Food and Agriculture Organization of the United Nations. Statistics Division, FAOSTAT 2013. http://faostat3.fao.org/
11. Freeman S, Katan T, Shabi E (1998) Characterization of Colletotrichum species responsible for anthracnose disease of various fruits. Plant Dis 82:596–605
12. González E, Sutton TB (2004) Population diversity within isolates of Colletotrichum spp. causing glomerella leaf spot and bitter rot of apples in three Orchards in North Carolina. Plant Dis 88:1335–1340
13. Guerber JC, Liu B, Correll JC, Johnston PR (2003) Characterization of diversity in Colletotrichum acutatum sensu lato by sequence analysis of two gene introns, mtDNA and intron RFLPs, and mating compatibility. Mycologia 95:872–895
14. Hillis D, Bull J (1993) An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Syst Biol 42:182–192
15. Jiang J, Zhai H, Li H, Wang Z, Chen Y, Hong N, Wang G, Chogong G, Xu W (2014) Identification and characterization of Colletotrichum fructicola causing black spot on young fruit related to bitter rot of pear (Pyrus bretschneideri Rehd.) in China. Crop Prot 58:41–48
16. Kou L, Verneta G, Luo Y, Jurick W (2013) First report of Colletotrichum fioriniae causing postharvest decay on ‘Nittany’ apple fruit in the United States. Plant Dis 98:993
17. Larkin M, Blackshields G, Brown N, Chenna R, McGettigan P, McWilliam H, Valentin F, Wallace I, Wilm A, Lopez R, Thompson J, Gibson T, Higgins D (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23:2947–2948
18. Li HN, Jiang JJ, Hong N, Wang GP, Xu WX (2013) First report of Colletotrichum fructicola causing bitter rot of pear (Pyrus bretschneideri) in China. Plant Dis 97:1000
19. Lubbe CM, Denman S, Cannon PF, Groenewald JZ, Lamprecht SC, Crous PW (2004) Characterization of Colletotrichum species associated with diseases of Proteaceae. Mycologia 96:1268–1279
20. MacKenzie SJ, Peres NA, Barquero MP, Arauz LF, Timmer WL (2009) Host range and genetic relatedness of Colletotrichum acutatum isolates from fruit crops and leather leaf fern in Florida. Phytopathology 99:620–631
21. Martinez-Culebras PV, Querol A, Suarez-Fernandez MB, Garcia-Lopez MD, Barrio E (2003) Phylogenetic relationships among Colletotrichum pathogens of strawberry and design of PCR primers for their identification. J Phytopathol 151:135–143
22. Mills PR, Sreenivasaprasad S, Brown AE (1992) Detection and differentiation of Colletotrichum gloeosporioides isolates using PCR. FEMS Microbiol Lett 98:137–144
23. Milne I, Lindner D, Bayer B, Husmeier D, McGuire G, Marshall DF, Wright F (2009) TOPALi v2: a rich graphical interface for evolutionary analyses of multiple alignments on HPC clusters and multi-core desktops. Bioinformatics 25:126–127
24. Palocci F, Rubini A, Granetti B, Arcioni S (1999) Rapid molecular approach for reliable identification of Tuber spp. ectomycorrhizae. FEMS Microbiol Ecol 28:23–30
25. Peever TL, Canihos Y, Olsen L, Ibañez A, Liu YC, Timmer LW (1999) Population genetic structure and host specificity of Alternaria spp. causing brown spot of Minneola tangelo and rough lemon in Florida. Phytopathology 89:851–860
26. Peres NAR, Kuramae EE, Dias MSC, Souza NL (2002) Identification and characterization of Colletotrichum spp. affecting fruit after harvest in Brazil. J Phytopathol 150:128–134
27. Phoulivong P, Cai L, Chen H, McKenzie HHC, Abdelsalam K, Chukeatirote E, Hyde KD (2010) Colletotrichum gloeosporioides is not a common pathogen on tropical fruits. Fungal Divers 44:33–43
28. Prihastuti H, Cai L, Chen H, McKenzie EHC, Hyde KD (2009) Characterization of Colletotrichum species associated with coffee berries in northern Thailand. Fungal Divers 39:89–109
29. Rodrigues A, Pinho D, Lisboa D, Nascimento R, Pereira O, Alfenas A, Furtado G (2014) Colletotrichum theobromicola causes defoliation, stem girdling and death of mini-cuttings of eucalyptus in Brazil. Trop Plant Pathol 39:326–330
30. Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574
31. Salustiano ME, Nunes Rondon M, Abreu L, da Silva CS, da Cruz MJ, Pfenning L (2014) The etiological agent of cotton ramulosis represents a single phylogenetic lineage within the Colletotrichum gloeosporioides species complex. Trop Plant Pathol 39:357–367
32. Shi Y, Correl JC, Rom CR (1996) Frequency of Colletotrichum species causing bitter rot of apple in the southeastern United States. Plant Dis 80:692–696
33. Shivas RG, Tan YP (2009) A taxonomic re-assesment of Colletotrichum acutatum, introducing C. fioriniae com. et stat. nov. and C. simmondsii sp. nov. Fungal Divers 39:111–122
34. Sreenivasaprasad S, Sharada K, Brown AE, Mills PR (1996) PCR-based detection of Colletotrichum acutatum on strawberry. Plant Pathol 45:650–655
35. Sutton TB (1990) Bitter rot. In: Jones AL, Aldwinckle HS (eds) Compendium of apple and pear disease. American Phytopathological Society, St. Paul, pp 15–16
36. Talhinhas P, Sreenivasaprasad S, Neves-Martins J, Oliveira H (2002) Genetic and morphological characterization of Colletotrichum acutatum causing anthracnose of lupins. Phytopathology 92:986–996
37. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739
38. Velho A, Stadnik M, Casanova L, Mondino P, Alaniz S (2014) First report of Colletotrichum nymphaeae causing apple bitter rot in southern Brazil. Plant Dis 98:567
39. Velho A, Alaniz S, Casanova L, Mondino P, Stadnik M (2015) New insights into the characterization of Colletotrichum species associated with apple diseases in southern Brazil and Uruguay. Fungal Biol. doi:10.1016/j.funbio.2014.12.009
40. Weir BS, Jhonston PR, Damm U (2012) The Colletotrichum gloeosporioides species complex. Stud Mycol 73:115–180
41. White TJ, Bruns T, Lee S, Taylor JW (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetic. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR Protocols, a guide to methods and applications. Academics, San Diego, pp 315–322
42. Wikee S, Cai L, Pairin N, McKenzie EHC, Su YY, Chukeatirote E, Thi HN, Bahkali AH, Moslem MA, Abdelsalam K, Hyde KD (2011) Colletotrichum species from jasmine (Jasminum sambac). Fungal Divers 46:171–182
43. Woudenberg JH, Aveskamp MM, de Gruyter J, Spiers AG, Crous PW (2009) Multiple Didymella teleomorphs are linked to the Phoma clematidina morphotype. Persoonia 22:56–62
44. Zhang R, Wang SF, Cui JQ, Sun GY (2008) First report of bitter rot caused by Colletotrichum acutatum on apple in China. Plant Dis 92:1474