-
1
-
-
58849161361
-
On vital aid: The why, what and how of validation
-
Kleywegt, G. J. (2009) On vital aid: the why, what and how of validation. Acta Crystallogr. D. Biol. Crystallogr., 65, 134-139.
-
(2009)
Acta Crystallogr. D. Biol. Crystallogr.
, vol.65
, pp. 134-139
-
-
Kleywegt, G.J.1
-
2
-
-
34249823094
-
Five retracted structure reports: Inverted or incorrect?
-
Matthews, B. W. (2007) Five retracted structure reports: inverted or incorrect? Protein Sci., 16, 1013-1016.
-
(2007)
Protein Sci.
, vol.16
, pp. 1013-1016
-
-
Matthews, B.W.1
-
3
-
-
84860277805
-
Detection and analysis of unusual features in the structural model and structure-factor data of a birch pollen allergen
-
Rupp, B. (2012) Detection and analysis of unusual features in the structural model and structure-factor data of a birch pollen allergen. Acta Crystallogr. Sect. F. Struct. Biol. Cryst. Commun., 68, 366-376.
-
(2012)
Acta Crystallogr. Sect. F. Struct. Biol. Cryst. Commun.
, vol.68
, pp. 366-376
-
-
Rupp, B.1
-
4
-
-
46049115862
-
Structure of the parathyroid hormone receptor C terminus bound to the G-protein dimer Gbeta1gamma2
-
Johnston, C. A., Kimple, A. J., Giguère, P. M. and Siderovski, D. P. (2008) Structure of the parathyroid hormone receptor C terminus bound to the G-protein dimer Gbeta1gamma2. Structure, 16, 1086-1094.
-
(2008)
Structure
, vol.16
, pp. 1086-1094
-
-
Johnston, C.A.1
Kimple, A.J.2
Giguère, P.M.3
Siderovski, D.P.4
-
5
-
-
0030047142
-
Errors in protein structures
-
Hooft, R. W., Vriend, G., Sander, C. and Abola, E. E. (1996) Errors in protein structures. Nature, 381, 272.
-
(1996)
Nature
, vol.381
, pp. 272
-
-
Hooft, R.W.1
Vriend, G.2
Sander, C.3
Abola, E.E.4
-
6
-
-
0000243829
-
PROCHECK: A program to check the stereochemical quality of protein structures
-
Laskowski, R. A., MacArthur, M. W., Moss, D. S. and Thornton, J. M. (1993) PROCHECK: a program to check the stereochemical quality of protein structures. J. Appl. Crystallogr., 26, 283-291.
-
(1993)
J. Appl. Crystallogr.
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
MacArthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
7
-
-
74549178560
-
MolProbity: All-atom structure validation for macromolecular crystallography
-
Chen, V. B., Arendall, W. B., Headd, J. J., Keedy, D. A., Immormino, R. M., Kapral, G. J., Murray, L. W., Richardson, J. S. and Richardson, D. C. (2010) MolProbity: all-atom structure validation for macromolecular crystallography. Acta Crystallogr. D. Biol. Crystallogr., 66, 12-21.
-
(2010)
Acta Crystallogr. D. Biol. Crystallogr.
, vol.66
, pp. 12-21
-
-
Chen, V.B.1
Arendall, W.B.2
Headd, J.J.3
Keedy, D.A.4
Immormino, R.M.5
Kapral, G.J.6
Murray, L.W.7
Richardson, J.S.8
Richardson, D.C.9
-
9
-
-
34447637455
-
ValLigURL: A server for ligand-structure comparison and validation
-
Kleywegt, G. J. and Harris, M. R. (2007) ValLigURL: a server for ligand-structure comparison and validation. Acta Crystallogr. D. Biol. Crystallogr., 63, 935-938.
-
(2007)
Acta Crystallogr. D. Biol. Crystallogr.
, vol.63
, pp. 935-938
-
-
Kleywegt, G.J.1
Harris, M.R.2
-
10
-
-
10044240760
-
Retrieval of crystallographically-derived molecular geometry information
-
Bruno, I. J., Cole, J. C., Kessler, M., Luo, J., Motherwell, W. D. S., Purkis, L. H., Smith, B. R., Taylor, R., Cooper, R. I., Harris, S. E. et al. Retrieval of crystallographically-derived molecular geometry information. J. Chem. Inf. Comput. Sci., 44, 2133-2144.
-
J. Chem. Inf. Comput. Sci.
, vol.44
, pp. 2133-2144
-
-
Bruno, I.J.1
Cole, J.C.2
Kessler, M.3
Luo, J.4
Motherwell, W.D.S.5
Purkis, L.H.6
Smith, B.R.7
Taylor, R.8
Cooper, R.I.9
Harris, S.E.10
-
12
-
-
76449098262
-
PHENIX: A comprehensive Python-based system for macromolecular structure solution
-
Adams, P. D., Afonine, P. V., Bunkóczi, G., Chen, V. B., Davis, I. W., Echols, N., Headd, J. J., Hung, L.-W., Kapral, G. J., Grosse-Kunstleve, R. W. et al. (2010) PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr. D. Biol. Crystallogr., 66, 213-221.
-
(2010)
Acta Crystallogr. D. Biol. Crystallogr.
, vol.66
, pp. 213-221
-
-
Adams, P.D.1
Afonine, P.V.2
Bunkóczi, G.3
Chen, V.B.4
Davis, I.W.5
Echols, N.6
Headd, J.J.7
Hung, L.-W.8
Kapral, G.J.9
Grosse-Kunstleve, R.W.10
-
13
-
-
13244253766
-
Pdb-care (PDB carbohydrate residue check): A program to support annotation of complex carbohydrate structures in PDB files
-
Lütteke, T. and von der Lieth, C.-W. (2004) pdb-care (PDB carbohydrate residue check): a program to support annotation of complex carbohydrate structures in PDB files. BMC Bioinformatics, 5, 69-74.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 69-74
-
-
Lütteke, T.1
Von Der Lieth, C.-W.2
-
14
-
-
84904809864
-
MotiveValidator: Interactive web-based validation of ligand and residue structure in biomolecular complexes
-
Vařeková, R. S., Jaiswal, D., Sehnal, D., Ionescu, C.-M., Geidl, S., Pravda, L., Horský, V., Wimmerová, M. and Koča, J. (2014) MotiveValidator: interactive web-based validation of ligand and residue structure in biomolecular complexes. Nucleic Acids Res., 42, W227-W233.
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. W227-W233
-
-
Vařeková, R.S.1
Jaiswal, D.2
Sehnal, D.3
Ionescu, C.-M.4
Geidl, S.5
Pravda, L.6
Horský, V.7
Wimmerová, M.8
Koča, J.9
-
15
-
-
78651277458
-
A series of PDB related databases for everyday needs
-
Joosten, R. P., te Beek, T. A. H., Krieger, E., Hekkelman, M. L., Hooft, R. W. W., Schneider, R., Sander, C. and Vriend, G. (2011) A series of PDB related databases for everyday needs. Nucleic Acids Res., 39, D411-D419.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. D411-D419
-
-
Joosten, R.P.1
Te Beek, T.A.H.2
Krieger, E.3
Hekkelman, M.L.4
Hooft, R.W.W.5
Schneider, R.6
Sander, C.7
Vriend, G.8
-
16
-
-
84929576044
-
The Protein Data Bank archive as an open data resource
-
Berman, H. M., Kleywegt, G. J., Nakamura, H. and Markley, J. L. (2014) The Protein Data Bank archive as an open data resource. J. Comput. Aided Mol. Des., 28, 1009-1014.
-
(2014)
J. Comput. Aided Mol. Des.
, vol.28
, pp. 1009-1014
-
-
Berman, H.M.1
Kleywegt, G.J.2
Nakamura, H.3
Markley, J.L.4
-
17
-
-
4544344217
-
Ligand Depot: A data warehouse for ligands bound to macromolecules
-
Feng, Z., Chen, L., Maddula, H., Akcan, O., Oughtred, R., Berman, H. M. and Westbrook, J. (2004) Ligand Depot: a data warehouse for ligands bound to macromolecules. Bioinformatics, 20, 2153-2155.
-
(2004)
Bioinformatics
, vol.20
, pp. 2153-2155
-
-
Feng, Z.1
Chen, L.2
Maddula, H.3
Akcan, O.4
Oughtred, R.5
Berman, H.M.6
Westbrook, J.7
-
18
-
-
84857618740
-
SiteBinder: An improved approach for comparing multiple protein structural motifs
-
Sehnal, D., Vařeková, R. S., Huber, H. J., Geidl, S., Ionescu, C.-M., Wimmerová, M. and Koča, J. (2012) SiteBinder: an improved approach for comparing multiple protein structural motifs. J. Chem. Inf. Model., 52, 343-359.
-
(2012)
J. Chem. Inf. Model.
, vol.52
, pp. 343-359
-
-
Sehnal, D.1
Vařeková, R.S.2
Huber, H.J.3
Geidl, S.4
Ionescu, C.-M.5
Wimmerová, M.6
Koča, J.7
-
19
-
-
1542328860
-
Data mining the protein data bank: Automatic detection and assignment of carbohydrate structures
-
Lütteke, T., Frank, M. and von der Lieth, C.-W. (2004) Data mining the protein data bank: automatic detection and assignment of carbohydrate structures. Carbohydr. Res., 339, 1015-1020.
-
(2004)
Carbohydr. Res.
, vol.339
, pp. 1015-1020
-
-
Lütteke, T.1
Frank, M.2
Von Der Lieth, C.-W.3
-
20
-
-
84863097556
-
The good, the bad and the twisted: A survey of ligand geometry in protein crystal structures
-
Liebeschuetz, J., Hennemann, J., Olsson, T. and Groom, C. R. (2012) The good, the bad and the twisted: a survey of ligand geometry in protein crystal structures. J. Comput. Aided Mol. Des., 26, 169-183.
-
(2012)
J. Comput. Aided Mol. Des.
, vol.26
, pp. 169-183
-
-
Liebeschuetz, J.1
Hennemann, J.2
Olsson, T.3
Groom, C.R.4
-
21
-
-
84891767304
-
DrugBank 4.0: Shedding new light on drug metabolism
-
Law, V., Knox, C., Djoumbou, Y., Jewison, T., Guo, A. C., Liu, Y., Maciejewski, A., Arndt, D., Wilson, M., Neveu, V. et al. (2014) DrugBank 4.0: shedding new light on drug metabolism. Nucleic Acids Res., 42, D1091-D1097.
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. D1091-D1097
-
-
Law, V.1
Knox, C.2
Djoumbou, Y.3
Jewison, T.4
Guo, A.C.5
Liu, Y.6
Maciejewski, A.7
Arndt, D.8
Wilson, M.9
Neveu, V.10
|