메뉴 건너뛰기




Volumn 20, Issue 9, 2015, Pages 525-527

Genome skimming for next-generation biodiversity analysis

Author keywords

[No Author keywords available]

Indexed keywords

BIODIVERSITY; CLASSIFICATION; DNA BARCODING; DNA SEQUENCE; GENOMICS; PHYLOGENY; PLANT; PLANT GENOME; TRENDS;

EID: 84940895458     PISSN: 13601385     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tplants.2015.06.012     Document Type: Letter
Times cited : (188)

References (14)
  • 1
    • 84863338497 scopus 로고    scopus 로고
    • Ultra-barcoding in cacao (Theobroma spp.; Malvaceae) using whole chloroplast genomes and nuclear ribosomal DNA
    • Kane N., et al. Ultra-barcoding in cacao (Theobroma spp.; Malvaceae) using whole chloroplast genomes and nuclear ribosomal DNA. Am. J. Bot. 2012, 99:320-329.
    • (2012) Am. J. Bot. , vol.99 , pp. 320-329
    • Kane, N.1
  • 2
    • 84874932278 scopus 로고    scopus 로고
    • Capturing chloroplast variation for molecular ecology studies: a simple next generation sequencing approach applied to a rainforest tree
    • McPherson H., et al. Capturing chloroplast variation for molecular ecology studies: a simple next generation sequencing approach applied to a rainforest tree. BMC Ecol. 2013, 13:8.
    • (2013) BMC Ecol. , vol.13 , pp. 8
    • McPherson, H.1
  • 3
    • 84884991193 scopus 로고    scopus 로고
    • Phylogenomics and taxonomy of Lecomtelleae (Poaceae), an isolated panicoid lineage from Madagascar
    • Besnard G., et al. Phylogenomics and taxonomy of Lecomtelleae (Poaceae), an isolated panicoid lineage from Madagascar. Ann. Bot. 2013, 112:1057-1066.
    • (2013) Ann. Bot. , vol.112 , pp. 1057-1066
    • Besnard, G.1
  • 4
    • 84905966537 scopus 로고    scopus 로고
    • Genome skimming by shotgun sequencing helps resolve the phylogeny of a pantropical tree family
    • Malé P.J.G., et al. Genome skimming by shotgun sequencing helps resolve the phylogeny of a pantropical tree family. Mol. Ecol. Resour. 2014, 14:966-975.
    • (2014) Mol. Ecol. Resour. , vol.14 , pp. 966-975
    • Malé, P.J.G.1
  • 5
    • 84858588968 scopus 로고    scopus 로고
    • Navigating the tip of the genomic iceberg: Next-generation sequencing for plant systematics
    • Straub S.C.K., et al. Navigating the tip of the genomic iceberg: Next-generation sequencing for plant systematics. Am. J. Bot. 2012, 99:349-364.
    • (2012) Am. J. Bot. , vol.99 , pp. 349-364
    • Straub, S.C.K.1
  • 6
    • 84890144124 scopus 로고    scopus 로고
    • Next-Gen phylogeography of rainforest trees: Exploring landscape-level cpDNA variation from whole-genome sequencing
    • Van der Merwe M., et al. Next-Gen phylogeography of rainforest trees: Exploring landscape-level cpDNA variation from whole-genome sequencing. Mol. Ecol. Resour. 2014, 14:199-208.
    • (2014) Mol. Ecol. Resour. , vol.14 , pp. 199-208
    • Van der Merwe, M.1
  • 7
    • 85028273316 scopus 로고    scopus 로고
    • Plant DNA barcoding: from gene to genome
    • Li X., et al. Plant DNA barcoding: from gene to genome. Biol. Rev. 2014, 90:157-166.
    • (2014) Biol. Rev. , vol.90 , pp. 157-166
    • Li, X.1
  • 8
    • 75649111557 scopus 로고    scopus 로고
    • Variable amounts of DNA related to the size of chloroplasts III. Biochemical determinations of DNA amounts per organelle
    • Rauwolf U., et al. Variable amounts of DNA related to the size of chloroplasts III. Biochemical determinations of DNA amounts per organelle. Mol. Genet. Genomics 2010, 283:35-47.
    • (2010) Mol. Genet. Genomics , vol.283 , pp. 35-47
    • Rauwolf, U.1
  • 9
    • 70349106898 scopus 로고    scopus 로고
    • The loss of DNA from chloroplasts as leaves mature: fact or artefact?
    • Rowan B.A., Bendich A.J. The loss of DNA from chloroplasts as leaves mature: fact or artefact?. J. Exp. Bot. 2009, 60:3005-3010.
    • (2009) J. Exp. Bot. , vol.60 , pp. 3005-3010
    • Rowan, B.A.1    Bendich, A.J.2
  • 10
    • 84965165257 scopus 로고    scopus 로고
    • Genomic repeat abundances contain phylogenetic signal
    • Dodsworth S., et al. Genomic repeat abundances contain phylogenetic signal. Syst. Biol. 2015, 64:112-126.
    • (2015) Syst. Biol. , vol.64 , pp. 112-126
    • Dodsworth, S.1
  • 11
    • 84880806552 scopus 로고    scopus 로고
    • Genomic treasure troves: complete genome sequencing of herbarium and insect museum specimens
    • Staats M., et al. Genomic treasure troves: complete genome sequencing of herbarium and insect museum specimens. PLoS ONE 2013, 8:e69189.
    • (2013) PLoS ONE , vol.8 , pp. e69189
    • Staats, M.1
  • 12
    • 84865464866 scopus 로고    scopus 로고
    • How to open the treasure chest? Optimising DNA extraction from herbarium specimens
    • Särkinen T., et al. How to open the treasure chest? Optimising DNA extraction from herbarium specimens. PLoS ONE 2012, 7:1-9.
    • (2012) PLoS ONE , vol.7 , pp. 1-9
    • Särkinen, T.1
  • 13
    • 84925352769 scopus 로고    scopus 로고
    • Assessing the performance of the Oxford Nanopore Technologies MinION
    • Laver T., et al. Assessing the performance of the Oxford Nanopore Technologies MinION. Biomol. Detect. Quantif. 2015, 3:1-8.
    • (2015) Biomol. Detect. Quantif. , vol.3 , pp. 1-8
    • Laver, T.1
  • 14
    • 84929074466 scopus 로고    scopus 로고
    • Pint-sized DNA sequencer impresses first users
    • Hayden E.C. Pint-sized DNA sequencer impresses first users. Nature 2015, 521:15-16.
    • (2015) Nature , vol.521 , pp. 15-16
    • Hayden, E.C.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.