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Volumn 31, Issue 17, 2015, Pages 2909-2911

Phylogeo: An R package for geographic analysis and visualization of microbiome data

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTER GRAPHICS; COMPUTER LANGUAGE; DNA SEQUENCE; GENETICS; HUMAN; METAGENOME; MICROFLORA; PHYLOGENY; PROCEDURES; SOFTWARE; STATISTICAL ANALYSIS; WEB BROWSER;

EID: 84940758687     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btv269     Document Type: Article
Times cited : (21)

References (11)
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  • 3
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  • 4
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    • R package version 2.2-1
    • Jari O., et al. (2015). vegan: Community Ecology Package. R package version 2.2-1. http://CRAN.R-project.org/package=vegan
    • (2015) Vegan: Community Ecology Package
    • Jari, O.1
  • 5
    • 29144464937 scopus 로고    scopus 로고
    • Unifrac: A new phylogenetic method for comparing microbial communities
    • Lozupone C., and Knight R. (2005). UniFrac: a new phylogenetic method for comparing microbial communities. Appl. Environ. Microbiol, 71, 8228-8235
    • (2005) Appl. Environ. Microbiol , vol.71 , pp. 8228-8235
    • Lozupone, C.1    Knight, R.2
  • 6
    • 84876427223 scopus 로고    scopus 로고
    • Phyloseq: An R package for reproducible interactive analysis, and graphics of microbiome census data
    • McMurdie P.J., and Holmes S. (2013). phyloseq: an R package for reproducible interactive analysis, and graphics of microbiome census data. PloS One, 8, e61217
    • (2013) Plos One , vol.8 , pp. e61217
    • McMurdie, P.J.1    Holmes, S.2
  • 7
    • 43349094507 scopus 로고    scopus 로고
    • The igraph software package for complex network research
    • Nepusz G.C.A.T. (2006). The igraph software package for complex network research, InterJournal, Complex Systems, 1695
    • (2006) InterJournal, Complex Systems , vol.1695
    • Nepusz, G.C.A.T.1
  • 8
    • 84940765219 scopus 로고    scopus 로고
    • R package version 2.3-9
    • Richard A., et al. (2014). maps: Draw Geographical Maps. R package version 2.3-9 http://CRAN.R-project.org/package=maps
    • (2014) Maps: Draw Geographical Maps
    • Richard, A.1
  • 9
    • 72949107142 scopus 로고    scopus 로고
    • Introducing mothur: Open-source, platform-independent, community-supported software for describing, and comparing microbial communities
    • Schloss P.D., et al. (2009). Introducing mothur: open-source, platform-independent, community-supported software for describing, and comparing microbial communities. Appl. Environ. Microbiol., 75, 7537-7541
    • (2009) Appl. Environ. Microbiol , vol.75 , pp. 7537-7541
    • Schloss, P.D.1
  • 10
    • 1042304216 scopus 로고    scopus 로고
    • APE: Analyses of phylogenetics, and evolution in R language
    • Strimmer E.P.A.J.C.A.K. (2004). APE: analyses of phylogenetics, and evolution in R language. Bioinformatics, 20, 289-290
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    • Strimmer, E.P.A.J.C.A.K.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.